RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 SCAF8Q9UPN6 1271 aaKnown RBP9.03□□□□□ -0.96
CCDC93-207ENST00000474006 RBM8AQ9Y5S9 174 aaKnown RBP9.03□□□□□ -0.96
CCDC93-207ENST00000474006 FLT1P17948 1338 aa9.03□□□□□ -0.96
CCDC93-207ENST00000474006 CHD4Q14839 1912 aa9.02□□□□□ -0.97
CCDC93-207ENST00000474006 CYP2D7A0A087X1C5 515 aa9.02□□□□□ -0.97
CCDC93-207ENST00000474006 MINDY4BA8MYZ0 360 aa9.02□□□□□ -0.97
CCDC93-207ENST00000474006 SMIM22K7EJ46 135 aa9.02□□□□□ -0.97
CCDC93-207ENST00000474006 ZNF213O14771 459 aa9.02□□□□□ -0.97
CCDC93-207ENST00000474006 ENTPD3O75355 529 aa9.02□□□□□ -0.97
CCDC93-207ENST00000474006 POLR3DP05423 398 aaPredicted RBP9.02□□□□□ -0.97
CCDC93-207ENST00000474006 CYP2D6P10635 497 aa9.02□□□□□ -0.97
CCDC93-207ENST00000474006 RASA3Q14644 834 aa9.02□□□□□ -0.97
CCDC93-207ENST00000474006 IMMTQ16891 758 aaKnown RBP9.02□□□□□ -0.97
CCDC93-207ENST00000474006 SBK1Q52WX2 424 aa9.02□□□□□ -0.97
CCDC93-207ENST00000474006 EAPPQ56P03 285 aaPredicted RBP9.02□□□□□ -0.97
CCDC93-207ENST00000474006 C12orf60Q5U649 245 aa9.02□□□□□ -0.97
CCDC93-207ENST00000474006 CREB3L3Q68CJ9 461 aa9.02□□□□□ -0.97
CCDC93-207ENST00000474006 PNMA8AQ86V59 439 aaPredicted RBP9.02□□□□□ -0.97
CCDC93-207ENST00000474006 FAM151AQ8WW52 585 aa9.02□□□□□ -0.97
CCDC93-207ENST00000474006 ZFRQ96KR1 1074 aaKnown RBP9.02□□□□□ -0.97
CCDC93-207ENST00000474006 C22orf23Q9BZE7 217 aa9.02□□□□□ -0.97
CCDC93-207ENST00000474006 OSBPL5Q9H0X9 879 aaPredicted RBP9.02□□□□□ -0.97
CCDC93-207ENST00000474006 UPF2Q9HAU5 1272 aaKnown RBP9.02□□□□□ -0.97
CCDC93-207ENST00000474006 PGAP2Q9UHJ9 254 aa9.02□□□□□ -0.97
CCDC93-207ENST00000474006 SCN9AQ15858 1988 aa9.02□□□□□ -0.97
CCDC93-207ENST00000474006 SLC27A2O14975 620 aa9.01□□□□□ -0.97
CCDC93-207ENST00000474006 CFHP08603 1231 aa9.01□□□□□ -0.97
CCDC93-207ENST00000474006 MCCP23508 829 aa9.01□□□□□ -0.97
CCDC93-207ENST00000474006 HSPA4P34932 840 aa9.01□□□□□ -0.97
CCDC93-207ENST00000474006 PLCD1P51178 756 aa9.01□□□□□ -0.97
CCDC93-207ENST00000474006 HAND2P61296 217 aa9.01□□□□□ -0.97
CCDC93-207ENST00000474006 LSM11P83369 360 aaKnown RBP eCLIP9.01□□□□□ -0.97
CCDC93-207ENST00000474006 CTDSPL2Q05D32 466 aa9.01□□□□□ -0.97
CCDC93-207ENST00000474006 SLC4A8Q2Y0W8 1093 aa9.01□□□□□ -0.97
CCDC93-207ENST00000474006 ADGRD1Q6QNK2 874 aa9.01□□□□□ -0.97
CCDC93-207ENST00000474006 SH3BP5LQ7L8J4 393 aa9.01□□□□□ -0.97
CCDC93-207ENST00000474006 FAM83AQ86UY5 434 aa9.01□□□□□ -0.97
CCDC93-207ENST00000474006 KCNB2Q92953 911 aa9.01□□□□□ -0.97
CCDC93-207ENST00000474006 DCPSQ96C86 337 aaKnown RBP9.01□□□□□ -0.97
CCDC93-207ENST00000474006 POM121Q96HA1 1249 aa9.01□□□□□ -0.97
CCDC93-207ENST00000474006 TMEM39BQ9GZU3 492 aa9.01□□□□□ -0.97
CCDC93-207ENST00000474006 DEFB129Q9H1M3 183 aa9.01□□□□□ -0.97
CCDC93-207ENST00000474006 NMRK2Q9NPI5 230 aa9.01□□□□□ -0.97
CCDC93-207ENST00000474006 INCENPQ9NQS7 918 aa9.01□□□□□ -0.97
CCDC93-207ENST00000474006 PCDHGC3Q9UN70 934 aa9.01□□□□□ -0.97
CCDC93-207ENST00000474006 DDTLA6NHG4 134 aaPredicted RBP9□□□□□ -0.97
CCDC93-207ENST00000474006 CYP21A2P08686 494 aa9□□□□□ -0.97
CCDC93-207ENST00000474006 TNNI2P48788 182 aa9□□□□□ -0.97
CCDC93-207ENST00000474006 PPARAQ07869 468 aa9□□□□□ -0.97
CCDC93-207ENST00000474006 TNFAIP1Q13829 316 aa9□□□□□ -0.97
CCDC93-207ENST00000474006 TSGA10IPQ3SY00 556 aa9□□□□□ -0.97
CCDC93-207ENST00000474006 RNF20Q5VTR2 975 aa9□□□□□ -0.97
CCDC93-207ENST00000474006 PRAMEF18Q5VWM3 479 aa9□□□□□ -0.97
CCDC93-207ENST00000474006 TTC6Q86TZ1 520 aa9□□□□□ -0.97
CCDC93-207ENST00000474006 USP48Q86UV5 1035 aa9□□□□□ -0.97
CCDC93-207ENST00000474006 FOXP4Q8IVH2 680 aaPredicted RBP9□□□□□ -0.97
CCDC93-207ENST00000474006 ZSCAN29Q8IWY8 852 aaPredicted RBP9□□□□□ -0.97
CCDC93-207ENST00000474006 AMOTL1Q8IY63 956 aa9□□□□□ -0.97
CCDC93-207ENST00000474006 STK11IPQ8N1F8 1099 aa9□□□□□ -0.97
CCDC93-207ENST00000474006 DYNLL2Q96FJ2 89 aa9□□□□□ -0.97
CCDC93-207ENST00000474006 DHX36Q9H2U1 1008 aaKnown RBP9□□□□□ -0.97
CCDC93-207ENST00000474006 GGA3Q9NZ52 723 aa9□□□□□ -0.97
CCDC93-207ENST00000474006 PI4KBQ9UBF8 816 aa9□□□□□ -0.97
CCDC93-207ENST00000474006 ARPP21Q9UBL0 812 aaPredicted RBP9□□□□□ -0.97
CCDC93-207ENST00000474006 ANAPC4Q9UJX5 808 aa9□□□□□ -0.97
CCDC93-207ENST00000474006 TAF6LQ9Y6J9 622 aa9□□□□□ -0.97
CCDC93-207ENST00000474006 ZMYM6O95789 1325 aa9□□□□□ -0.97
CCDC93-207ENST00000474006 CNTNAP1P78357 1384 aa8.99□□□□□ -0.97
CCDC93-207ENST00000474006 HRO43593 1189 aa8.99□□□□□ -0.97
CCDC93-207ENST00000474006 AP1G2O75843 785 aa8.99□□□□□ -0.97
CCDC93-207ENST00000474006 SLC3A2P08195 630 aaKnown RBP8.99□□□□□ -0.97
CCDC93-207ENST00000474006 SLURP2P0DP57 97 aa8.99□□□□□ -0.97
CCDC93-207ENST00000474006 ZKSCAN1P17029 563 aaPredicted RBP8.99□□□□□ -0.97
CCDC93-207ENST00000474006 RBM25P49756 843 aaKnown RBP8.99□□□□□ -0.97
CCDC93-207ENST00000474006 FUT2Q10981 343 aa8.99□□□□□ -0.97
CCDC93-207ENST00000474006 DLK2Q6UY11 383 aa8.99□□□□□ -0.97
CCDC93-207ENST00000474006 KRT26Q7Z3Y9 468 aa8.99□□□□□ -0.97
CCDC93-207ENST00000474006 APOBEC3FQ8IUX4 373 aaKnown RBP8.99□□□□□ -0.97
CCDC93-207ENST00000474006 CDAN1Q8IWY9 1227 aa8.99□□□□□ -0.97
CCDC93-207ENST00000474006 TEPSINQ96N21 525 aa8.99□□□□□ -0.97
CCDC93-207ENST00000474006 TBC1D32Q96NH3 1257 aa8.99□□□□□ -0.97
CCDC93-207ENST00000474006 SNX14Q9Y5W7 946 aa8.99□□□□□ -0.97
CCDC93-207ENST00000474006 TACC3Q9Y6A5 838 aa8.99□□□□□ -0.97
CCDC93-207ENST00000474006 PITPNM2Q9BZ72 1349 aa8.99□□□□□ -0.97
CCDC93-207ENST00000474006 E7EWF7 191 aa8.98□□□□□ -0.97
CCDC93-207ENST00000474006 HLA-DOAP06340 250 aa8.98□□□□□ -0.97
CCDC93-207ENST00000474006 FGRP09769 529 aa8.98□□□□□ -0.97
CCDC93-207ENST00000474006 CDK8P49336 464 aa8.98□□□□□ -0.97
CCDC93-207ENST00000474006 ANAPC15P60006 121 aa8.98□□□□□ -0.97
CCDC93-207ENST00000474006 GABPAQ06546 454 aa8.98□□□□□ -0.97
CCDC93-207ENST00000474006 MTMR2Q13614 643 aa8.98□□□□□ -0.97
CCDC93-207ENST00000474006 ADCK5Q3MIX3 580 aa8.98□□□□□ -0.97
CCDC93-207ENST00000474006 KMT5BQ4FZB7 885 aa8.98□□□□□ -0.97
CCDC93-207ENST00000474006 AKNAD1Q5T1N1 836 aa8.98□□□□□ -0.97
CCDC93-207ENST00000474006 LCE2DQ5TA82 110 aaPredicted RBP8.98□□□□□ -0.97
CCDC93-207ENST00000474006 NBPF12Q5TAG4 269 aaPredicted RBP8.98□□□□□ -0.97
CCDC93-207ENST00000474006 MAP1SQ66K74 1059 aaPredicted RBP8.98□□□□□ -0.97
CCDC93-207ENST00000474006 MFSD6Q6ZSS7 791 aa8.98□□□□□ -0.97
CCDC93-207ENST00000474006 CDC37L1Q7L3B6 337 aa8.98□□□□□ -0.97
CCDC93-207ENST00000474006 MIGA2Q7L4E1 593 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms