RNA–Protein interactions for RNA: ENST00000473978.5

PCYT1A-214, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-214ENST00000473978 SHROOM1Q2M3G4 852 aaPredicted RBP15.84■□□□□ 0.13
PCYT1A-214ENST00000473978 SLF2Q8IX21 1173 aa15.84■□□□□ 0.13
PCYT1A-214ENST00000473978 ZGPATQ8N5A5 531 aaKnown RBP15.84■□□□□ 0.13
PCYT1A-214ENST00000473978 EMILIN3Q9NT22 766 aa15.84■□□□□ 0.13
PCYT1A-214ENST00000473978 TMEM39AQ9NV64 488 aa15.84■□□□□ 0.13
PCYT1A-214ENST00000473978 GPR75-ASB3A0A0A6YYF3 556 aa15.83■□□□□ 0.12
PCYT1A-214ENST00000473978 FAM86C2PA6NEL3 165 aa15.83■□□□□ 0.12
PCYT1A-214ENST00000473978 EYA2O00167 538 aa15.83■□□□□ 0.12
PCYT1A-214ENST00000473978 SEMA3EO15041 775 aa15.83■□□□□ 0.12
PCYT1A-214ENST00000473978 GPR37L1O60883 481 aa15.83■□□□□ 0.12
PCYT1A-214ENST00000473978 ASNSP08243 561 aa15.83■□□□□ 0.12
PCYT1A-214ENST00000473978 NCBP3Q53F19 620 aaKnown RBP15.83■□□□□ 0.12
PCYT1A-214ENST00000473978 KHSRPQ92945 711 aaKnown RBP eCLIP15.83■□□□□ 0.12
PCYT1A-214ENST00000473978 ABCF2Q9UG63 623 aa15.83■□□□□ 0.12
PCYT1A-214ENST00000473978 IVNS1ABPQ9Y6Y0 642 aa15.83■□□□□ 0.12
PCYT1A-214ENST00000473978 MRE11P49959 708 aa15.82■□□□□ 0.12
PCYT1A-214ENST00000473978 FAM47AQ5JRC9 791 aa15.82■□□□□ 0.12
PCYT1A-214ENST00000473978 RASIP1Q5U651 963 aa15.82■□□□□ 0.12
PCYT1A-214ENST00000473978 C16orf59Q7L2K0 433 aa15.82■□□□□ 0.12
PCYT1A-214ENST00000473978 WWC1Q8IX03 1113 aa15.82■□□□□ 0.12
PCYT1A-214ENST00000473978 ZNF384Q8TF68 577 aa15.82■□□□□ 0.12
PCYT1A-214ENST00000473978 HERC5Q9UII4 1024 aaKnown RBP15.82■□□□□ 0.12
PCYT1A-214ENST00000473978 PHF24Q9UPV7 400 aa15.82■□□□□ 0.12
PCYT1A-214ENST00000473978 FAAP100Q0VG06 881 aa15.81■□□□□ 0.12
PCYT1A-214ENST00000473978 AAK1Q2M2I8 961 aa15.81■□□□□ 0.12
PCYT1A-214ENST00000473978 TMEM240Q5SV17 173 aa15.81■□□□□ 0.12
PCYT1A-214ENST00000473978 PRAMEF19Q5SWL8 479 aa15.81■□□□□ 0.12
PCYT1A-214ENST00000473978 ATG9AQ7Z3C6 839 aa15.81■□□□□ 0.12
PCYT1A-214ENST00000473978 BTBD7Q9P203 1132 aa15.81■□□□□ 0.12
PCYT1A-214ENST00000473978 FANCIQ9NVI1 1328 aa15.81■□□□□ 0.12
PCYT1A-214ENST00000473978 RFX5P48382 616 aaPredicted RBP15.8■□□□□ 0.12
PCYT1A-214ENST00000473978 MECOMQ03112 1051 aa15.8■□□□□ 0.12
PCYT1A-214ENST00000473978 ATP2B3Q16720 1220 aa15.8■□□□□ 0.12
PCYT1A-214ENST00000473978 OLFML2BQ68BL8 750 aa15.8■□□□□ 0.12
PCYT1A-214ENST00000473978 MICALL1Q8N3F8 863 aa15.8■□□□□ 0.12
PCYT1A-214ENST00000473978 SLC44A5Q8NCS7 719 aa15.8■□□□□ 0.12
PCYT1A-214ENST00000473978 GDF11O95390 407 aa15.79■□□□□ 0.12
PCYT1A-214ENST00000473978 TIMP1P01033 207 aa15.79■□□□□ 0.12
PCYT1A-214ENST00000473978 CCDC27Q2M243 656 aa15.79■□□□□ 0.12
PCYT1A-214ENST00000473978 DPP9Q86TI2 863 aa15.79■□□□□ 0.12
PCYT1A-214ENST00000473978 NKX2-4Q9H2Z4 354 aa15.79■□□□□ 0.12
PCYT1A-214ENST00000473978 PI4KBQ9UBF8 816 aa15.79■□□□□ 0.12
PCYT1A-214ENST00000473978 ERC2O15083 957 aa15.78■□□□□ 0.12
PCYT1A-214ENST00000473978 ADORA2AP29274 412 aa15.78■□□□□ 0.12
PCYT1A-214ENST00000473978 EXOSC9Q06265 439 aaKnown RBP15.78■□□□□ 0.12
PCYT1A-214ENST00000473978 RASGRF1Q13972 1273 aa15.78■□□□□ 0.12
PCYT1A-214ENST00000473978 CCDC102BQ68D86 513 aa15.78■□□□□ 0.12
PCYT1A-214ENST00000473978 USP17L2Q6R6M4 530 aa15.78■□□□□ 0.12
PCYT1A-214ENST00000473978 DNAJC18Q9H819 358 aa15.78■□□□□ 0.12
PCYT1A-214ENST00000473978 MSRAQ9UJ68 235 aa15.78■□□□□ 0.12
PCYT1A-214ENST00000473978 IL16Q14005 1332 aa15.78■□□□□ 0.12
PCYT1A-214ENST00000473978 SIPA1L1O43166 1804 aa15.78■□□□□ 0.12
PCYT1A-214ENST00000473978 A0A1W2PQ45 241 aaPredicted RBP15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 A0A1W2PQY0 241 aa15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 USP17L15C9J2P7 530 aa15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 USP17L13C9JLJ4 530 aa15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 USP17L11C9JVI0 530 aa15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 USP17L18D6R9N7 530 aa15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 USP17L22D6RA61 530 aa15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 USP17L17D6RBQ6 530 aa15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 USP17L19D6RCP7 530 aa15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 USP17L20D6RJB6 530 aa15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 ZBTB22O15209 634 aa15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 ADORA1P30542 326 aa15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 USP17L24Q0WX57 530 aa15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 SKIV2LQ15477 1246 aaKnown RBP15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 RAB30Q15771 203 aa15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 SPTY2D1Q68D10 685 aaPredicted RBP15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 MFSD5Q6N075 450 aa15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 ANKRD33Q7Z3H0 272 aa15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 TOX2Q96NM4 488 aa15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 SLC28A3Q9HAS3 691 aa15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 ZBTB21Q9ULJ3 1066 aa15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 YBX2Q9Y2T7 364 aaKnown RBP15.77■□□□□ 0.12
PCYT1A-214ENST00000473978 SMIM22K7EJ46 135 aa15.77■□□□□ 0.11
PCYT1A-214ENST00000473978 COBLO75128 1261 aa15.77■□□□□ 0.11
PCYT1A-214ENST00000473978 ZYXQ15942 572 aaKnown RBP15.77■□□□□ 0.11
PCYT1A-214ENST00000473978 CATSPERGQ6ZRH7 1159 aa15.77■□□□□ 0.11
PCYT1A-214ENST00000473978 XPNPEP3Q9NQH7 507 aa15.77■□□□□ 0.11
PCYT1A-214ENST00000473978 USP34Q70CQ2 3546 aa15.76■□□□□ 0.11
PCYT1A-214ENST00000473978 SMCHD1A6NHR9 2005 aa15.76■□□□□ 0.11
PCYT1A-214ENST00000473978 TLL1O43897 1013 aa15.76■□□□□ 0.11
PCYT1A-214ENST00000473978 MAP4K4O95819 1239 aaPredicted RBP15.76■□□□□ 0.11
PCYT1A-214ENST00000473978 PGK1P00558 417 aa15.76■□□□□ 0.11
PCYT1A-214ENST00000473978 ACRP10323 421 aa15.76■□□□□ 0.11
PCYT1A-214ENST00000473978 CSF2RAP15509 400 aa15.76■□□□□ 0.11
PCYT1A-214ENST00000473978 PPIGQ13427 754 aaKnown RBP eCLIP15.76■□□□□ 0.118e-8■■■□□ 17.1
PCYT1A-214ENST00000473978 LBX2Q6XYB7 198 aa15.76■□□□□ 0.11
PCYT1A-214ENST00000473978 ZNF365Q70YC5 407 aa15.76■□□□□ 0.11
PCYT1A-214ENST00000473978 ERICH6Q7L0X2 663 aa15.76■□□□□ 0.11
PCYT1A-214ENST00000473978 HERVK_113Q902F9 699 aa15.76■□□□□ 0.11
PCYT1A-214ENST00000473978 C12orf42Q96LP6 360 aa15.76■□□□□ 0.11
PCYT1A-214ENST00000473978 SIL1Q9H173 461 aa15.76■□□□□ 0.11
PCYT1A-214ENST00000473978 GINM1Q9NU53 330 aa15.76■□□□□ 0.11
PCYT1A-214ENST00000473978 CEP126Q9P2H0 1117 aa15.76■□□□□ 0.11
PCYT1A-214ENST00000473978 TBX21Q9UL17 535 aa15.76■□□□□ 0.11
PCYT1A-214ENST00000473978 CACNA1AO00555 2505 aa15.75■□□□□ 0.11
PCYT1A-214ENST00000473978 DCDC2CA8MYV0 355 aa15.75■□□□□ 0.11
PCYT1A-214ENST00000473978 CCDC174Q6PII3 467 aa15.75■□□□□ 0.11
PCYT1A-214ENST00000473978 RNF180Q86T96 592 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms