RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 SPDYE2Q495Y8 402 aa17.24■□□□□ 0.35
LMNA-213ENST00000473598 FAM47AQ5JRC9 791 aa17.24■□□□□ 0.35
LMNA-213ENST00000473598 SASS6Q6UVJ0 657 aa17.24■□□□□ 0.35
LMNA-213ENST00000473598 ZNF444Q8N0Y2 327 aaPredicted RBP17.24■□□□□ 0.35
LMNA-213ENST00000473598 ADARB2Q9NS39 739 aaKnown RBP17.24■□□□□ 0.35
LMNA-213ENST00000473598 ZNF70Q9UC06 446 aaPredicted RBP17.24■□□□□ 0.35
LMNA-213ENST00000473598 SMC3Q9UQE7 1217 aa17.24■□□□□ 0.35
LMNA-213ENST00000473598 CCDC69A6NI79 296 aa17.23■□□□□ 0.35
LMNA-213ENST00000473598 CCT2P78371 535 aaKnown RBP17.23■□□□□ 0.35
LMNA-213ENST00000473598 TFAP4Q01664 338 aa17.23■□□□□ 0.35
LMNA-213ENST00000473598 APOA5Q6Q788 366 aa17.23■□□□□ 0.35
LMNA-213ENST00000473598 NFXL1Q6ZNB6 911 aa17.23■□□□□ 0.35
LMNA-213ENST00000473598 GAS2L3Q86XJ1 694 aa17.23■□□□□ 0.35
LMNA-213ENST00000473598 EHD4Q9H223 541 aa17.23■□□□□ 0.35
LMNA-213ENST00000473598 SERPINB13Q9UIV8 391 aa17.23■□□□□ 0.35
LMNA-213ENST00000473598 HPS5Q9UPZ3 1129 aa17.23■□□□□ 0.35
LMNA-213ENST00000473598 CLRN2A0PK11 232 aa17.23■□□□□ 0.35
LMNA-213ENST00000473598 DDTLA6NHG4 134 aaPredicted RBP17.23■□□□□ 0.35
LMNA-213ENST00000473598 GOLGA8BA8MQT2 603 aa17.23■□□□□ 0.35
LMNA-213ENST00000473598 WNT10BO00744 389 aa17.23■□□□□ 0.35
LMNA-213ENST00000473598 ENAHQ8N8S7 591 aaPredicted RBP17.23■□□□□ 0.35
LMNA-213ENST00000473598 CHMP4CQ96CF2 233 aa17.23■□□□□ 0.35
LMNA-213ENST00000473598 SWAP70Q9UH65 585 aa17.23■□□□□ 0.35
LMNA-213ENST00000473598 NOL7Q9UMY1 257 aaKnown RBP17.23■□□□□ 0.35
LMNA-213ENST00000473598 ASTN2O75129 1339 aaPredicted RBP17.22■□□□□ 0.35
LMNA-213ENST00000473598 ATRNL1Q5VV63 1379 aa17.22■□□□□ 0.35
LMNA-213ENST00000473598 GOLGA6L22H0YM25 854 aa17.22■□□□□ 0.35
LMNA-213ENST00000473598 MYO1BO43795 1136 aa17.22■□□□□ 0.35
LMNA-213ENST00000473598 SH3BP5LQ7L8J4 393 aa17.22■□□□□ 0.35
LMNA-213ENST00000473598 SLC12A7Q9Y666 1083 aa17.22■□□□□ 0.35
LMNA-213ENST00000473598 TSPY3P0CV98 308 aa17.21■□□□□ 0.35
LMNA-213ENST00000473598 TSPY8P0CW00 308 aa17.21■□□□□ 0.35
LMNA-213ENST00000473598 GJB2P29033 226 aa17.21■□□□□ 0.35
LMNA-213ENST00000473598 NASPP49321 788 aaPredicted RBP17.21■□□□□ 0.35
LMNA-213ENST00000473598 KIF4BQ2VIQ3 1234 aa17.21■□□□□ 0.35
LMNA-213ENST00000473598 NBPF9Q3BBW0 867 aa17.21■□□□□ 0.35
LMNA-213ENST00000473598 FKBP1CQ5VVH2 108 aa17.21■□□□□ 0.35
LMNA-213ENST00000473598 LLPHQ9BRT6 129 aaKnown RBP17.21■□□□□ 0.35
LMNA-213ENST00000473598 TCP11L1Q9NUJ3 509 aa17.21■□□□□ 0.35
LMNA-213ENST00000473598 PI4KBQ9UBF8 816 aa17.21■□□□□ 0.35
LMNA-213ENST00000473598 TCP10L2B9ZVM9 353 aa17.21■□□□□ 0.35
LMNA-213ENST00000473598 ZBTB43O43298 467 aa17.21■□□□□ 0.35
LMNA-213ENST00000473598 NMT2O60551 498 aa17.21■□□□□ 0.35
LMNA-213ENST00000473598 IFIT1BQ5T764 474 aaKnown RBP17.21■□□□□ 0.35
LMNA-213ENST00000473598 ZSCAN29Q8IWY8 852 aaPredicted RBP17.21■□□□□ 0.35
LMNA-213ENST00000473598 NCOA5Q9HCD5 579 aaKnown RBP17.21■□□□□ 0.35
LMNA-213ENST00000473598 CCDC178Q5BJE1 867 aa17.2■□□□□ 0.34
LMNA-213ENST00000473598 SYNE3Q6ZMZ3 975 aa17.2■□□□□ 0.34
LMNA-213ENST00000473598 USP50Q70EL3 339 aaPredicted RBP17.2■□□□□ 0.34
LMNA-213ENST00000473598 RAB11FIP4Q86YS3 637 aa17.2■□□□□ 0.34
LMNA-213ENST00000473598 FAM151AQ8WW52 585 aa17.2■□□□□ 0.34
LMNA-213ENST00000473598 IL17RBQ9NRM6 502 aa17.2■□□□□ 0.34
LMNA-213ENST00000473598 TAOK2Q9UL54 1235 aa17.2■□□□□ 0.34
LMNA-213ENST00000473598 SCAF8Q9UPN6 1271 aaKnown RBP17.2■□□□□ 0.34
LMNA-213ENST00000473598 GREB1LQ9C091 1923 aaPredicted RBP17.2■□□□□ 0.34
LMNA-213ENST00000473598 DHX16O60231 1041 aaKnown RBP17.2■□□□□ 0.34
LMNA-213ENST00000473598 DTNBO60941 627 aa17.2■□□□□ 0.34
LMNA-213ENST00000473598 CTDNEP1O95476 244 aa17.2■□□□□ 0.34
LMNA-213ENST00000473598 METAP2P50579 478 aaKnown RBP eCLIP17.2■□□□□ 0.34
LMNA-213ENST00000473598 PNMA8AQ86V59 439 aaPredicted RBP17.2■□□□□ 0.34
LMNA-213ENST00000473598 MICU3Q86XE3 530 aa17.2■□□□□ 0.34
LMNA-213ENST00000473598 NSUN7Q8NE18 718 aaKnown RBP17.2■□□□□ 0.34
LMNA-213ENST00000473598 NEDD1Q8NHV4 660 aa17.2■□□□□ 0.34
LMNA-213ENST00000473598 SMARCC2Q8TAQ2 1214 aa17.2■□□□□ 0.34
LMNA-213ENST00000473598 VEZTQ9HBM0 779 aa17.2■□□□□ 0.34
LMNA-213ENST00000473598 CLEC11AQ9Y240 323 aa17.2■□□□□ 0.34
LMNA-213ENST00000473598 CNTNAP1P78357 1384 aa17.19■□□□□ 0.34
LMNA-213ENST00000473598 NID2Q14112 1375 aa17.19■□□□□ 0.34
LMNA-213ENST00000473598 BRD1O95696 1058 aa17.19■□□□□ 0.34
LMNA-213ENST00000473598 RCAN1P53805 252 aa17.19■□□□□ 0.34
LMNA-213ENST00000473598 FAM83AQ86UY5 434 aa17.19■□□□□ 0.34
LMNA-213ENST00000473598 FOXP4Q8IVH2 680 aaPredicted RBP17.19■□□□□ 0.34
LMNA-213ENST00000473598 ZNF654Q8IZM8 581 aa17.19■□□□□ 0.34
LMNA-213ENST00000473598 MYL10Q9BUA6 226 aa17.19■□□□□ 0.34
LMNA-213ENST00000473598 RXRAP19793 462 aa17.18■□□□□ 0.34
LMNA-213ENST00000473598 SHMT1P34896 483 aa17.18■□□□□ 0.34
LMNA-213ENST00000473598 MAP1SQ66K74 1059 aaPredicted RBP17.18■□□□□ 0.34
LMNA-213ENST00000473598 RCSD1Q6JBY9 416 aa17.18■□□□□ 0.34
LMNA-213ENST00000473598 METTL16Q86W50 562 aaKnown RBP17.18■□□□□ 0.34
LMNA-213ENST00000473598 DGKHQ86XP1 1220 aa17.18■□□□□ 0.34
LMNA-213ENST00000473598 CRACR2BQ8N4Y2 399 aaPredicted RBP17.18■□□□□ 0.34
LMNA-213ENST00000473598 ANKS1AQ92625 1134 aa17.18■□□□□ 0.34
LMNA-213ENST00000473598 DNAJC18Q9H819 358 aa17.18■□□□□ 0.34
LMNA-213ENST00000473598 PLIN4Q96Q06 1357 aa17.18■□□□□ 0.34
LMNA-213ENST00000473598 GOLGA8AA7E2F4 631 aa17.18■□□□□ 0.34
LMNA-213ENST00000473598 JAK2O60674 1132 aa17.18■□□□□ 0.34
LMNA-213ENST00000473598 MCTP1Q6DN14 999 aa17.17■□□□□ 0.34
LMNA-213ENST00000473598 DLK2Q6UY11 383 aa17.17■□□□□ 0.34
LMNA-213ENST00000473598 CSRNP1Q96S65 589 aa17.17■□□□□ 0.34
LMNA-213ENST00000473598 PTPDC1A2A3K4 754 aa17.16■□□□□ 0.34
LMNA-213ENST00000473598 CPLX1O14810 134 aa17.16■□□□□ 0.34
LMNA-213ENST00000473598 TOMM70O94826 608 aa17.16■□□□□ 0.34
LMNA-213ENST00000473598 CDC27P30260 824 aa17.16■□□□□ 0.34
LMNA-213ENST00000473598 HMGN5P82970 282 aaKnown RBP17.16■□□□□ 0.34
LMNA-213ENST00000473598 CATIPQ7Z7H3 387 aa17.16■□□□□ 0.34
LMNA-213ENST00000473598 LDHDQ86WU2 507 aa17.16■□□□□ 0.34
LMNA-213ENST00000473598 CCDC144CPQ8IYA2 1237 aa17.16■□□□□ 0.34
LMNA-213ENST00000473598 TRIM34Q9BYJ4 488 aa17.16■□□□□ 0.34
LMNA-213ENST00000473598 FAM217BQ9NTX9 383 aaPredicted RBP17.16■□□□□ 0.34
LMNA-213ENST00000473598 GGA3Q9NZ52 723 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms