RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 RCOR1Q9UKL0 485 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 FOCADQ5VW36 1801 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 STK36Q9NRP7 1315 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 CCDC196A0A1B0GTZ2 297 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 DEXIO95424 95 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 STK38Q15208 465 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 SLC35G1Q2M3R5 365 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 STRIP1Q5VSL9 837 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 C16orf86Q6ZW13 317 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 DIS3L2Q8IYB7 885 aaKnown RBP7.22□□□□□ -1.25
CLK1-210ENST00000473565 CTCFLQ8NI51 663 aaPredicted RBP7.22□□□□□ -1.25
CLK1-210ENST00000473565 TMEM47Q9BQJ4 181 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.22□□□□□ -1.25
CLK1-210ENST00000473565 ZBTB12Q9Y330 459 aaPredicted RBP7.22□□□□□ -1.25
CLK1-210ENST00000473565 ZNF646O15015 1829 aaPredicted RBP7.21□□□□□ -1.25
CLK1-210ENST00000473565 CNTNAP5Q8WYK1 1306 aa7.21□□□□□ -1.25
CLK1-210ENST00000473565 A0A087WWV3 80 aa7.21□□□□□ -1.26
CLK1-210ENST00000473565 AKR1B1P15121 316 aa7.21□□□□□ -1.26
CLK1-210ENST00000473565 NASPP49321 788 aaPredicted RBP7.21□□□□□ -1.26
CLK1-210ENST00000473565 AKAP17AQ02040 695 aaKnown RBP7.21□□□□□ -1.26
CLK1-210ENST00000473565 SF3A1Q15459 793 aaKnown RBP7.21□□□□□ -1.26
CLK1-210ENST00000473565 CCAR1Q8IX12 1150 aaKnown RBP7.21□□□□□ -1.26
CLK1-210ENST00000473565 ERCC4Q92889 916 aaPredicted RBP7.21□□□□□ -1.26
CLK1-210ENST00000473565 CEP95Q96GE4 821 aa7.21□□□□□ -1.26
CLK1-210ENST00000473565 PCDHA7Q9UN72 937 aa7.21□□□□□ -1.26
CLK1-210ENST00000473565 DDAH1O94760 285 aa7.21□□□□□ -1.26
CLK1-210ENST00000473565 MMP1P03956 469 aa7.21□□□□□ -1.26
CLK1-210ENST00000473565 EARS2Q5JPH6 523 aaKnown RBP7.21□□□□□ -1.26
CLK1-210ENST00000473565 LARGE2Q8N3Y3 721 aa7.21□□□□□ -1.26
CLK1-210ENST00000473565 LINC00301Q8NCQ3 95 aa7.21□□□□□ -1.26
CLK1-210ENST00000473565 OSBPL5Q9H0X9 879 aaPredicted RBP7.21□□□□□ -1.26
CLK1-210ENST00000473565 TDRD3Q9H7E2 651 aaKnown RBP7.21□□□□□ -1.26
CLK1-210ENST00000473565 RTEL1Q9NZ71 1219 aa7.21□□□□□ -1.26
CLK1-210ENST00000473565 SCAF8Q9UPN6 1271 aaKnown RBP7.21□□□□□ -1.26
CLK1-210ENST00000473565 MRVI1Q9Y6F6 885 aa7.21□□□□□ -1.26
CLK1-210ENST00000473565 A0A1B0GVL5 298 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 DDTLA6NHG4 134 aaPredicted RBP7.2□□□□□ -1.26
CLK1-210ENST00000473565 CCDC93Q567U6 631 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 ANO1Q5XXA6 986 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 BRAPQ7Z569 592 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 FSIP1Q8NA03 581 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 GPKOWQ92917 476 aaPredicted RBP eCLIP7.2□□□□□ -1.262e-12■□□□□ 8.8
CLK1-210ENST00000473565 RNF26Q9BY78 433 aaPredicted RBP7.2□□□□□ -1.26
CLK1-210ENST00000473565 NUP62CLQ9H1M0 184 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 TSPY26PQ9H489 355 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 SUGT1Q9Y2Z0 365 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 MYH8P13535 1937 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 TOB1P50616 345 aaPredicted RBP7.2□□□□□ -1.26
CLK1-210ENST00000473565 USP17L2Q6R6M4 530 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 HHIPL2Q6UWX4 724 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 LRRC47Q8N1G4 583 aaKnown RBP7.2□□□□□ -1.26
CLK1-210ENST00000473565 PRMT6Q96LA8 375 aaPredicted RBP7.2□□□□□ -1.26
CLK1-210ENST00000473565 ZDHHC15Q96MV8 337 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 CLIC6Q96NY7 704 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 FAM198AQ9UFP1 575 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 CLRN2A0PK11 232 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 PSMD14O00487 310 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 MPHOSPH10O00566 681 aaKnown RBP7.2□□□□□ -1.26
CLK1-210ENST00000473565 WNT7AO00755 349 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 SPTLC2O15270 562 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 CALM1P0DP23 149 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 CALM2P0DP24 149 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 CALM3P0DP25 149 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 U2AF2P26368 475 aaKnown RBP eCLIP7.2□□□□□ -1.269e-7■■■□□ 14.9
CLK1-210ENST00000473565 SHMT1P34896 483 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 RCAN1P53805 252 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 ATP2B2Q01814 1243 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 CFAP100Q494V2 611 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 SPECC1Q5M775 1068 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 SH3BP5LQ7L8J4 393 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 DGKHQ86XP1 1220 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 CERS3Q8IU89 383 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 NOSTRINQ8IVI9 506 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 ZSCAN29Q8IWY8 852 aaPredicted RBP7.2□□□□□ -1.26
CLK1-210ENST00000473565 WASF1Q92558 559 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 DNAJC18Q9H819 358 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 RBM28Q9NW13 759 aaKnown RBP7.2□□□□□ -1.26
CLK1-210ENST00000473565 MAD2L2Q9UI95 211 aa7.2□□□□□ -1.26
CLK1-210ENST00000473565 SHTN1A0MZ66 631 aa7.19□□□□□ -1.26
CLK1-210ENST00000473565 PRPF3O43395 683 aaKnown RBP7.19□□□□□ -1.26
CLK1-210ENST00000473565 CYTH3O43739 400 aa7.19□□□□□ -1.26
CLK1-210ENST00000473565 IGSF3O75054 1194 aa7.19□□□□□ -1.26
CLK1-210ENST00000473565 GABPAQ06546 454 aa7.19□□□□□ -1.26
CLK1-210ENST00000473565 SAFBQ15424 915 aaKnown RBP eCLIP7.19□□□□□ -1.26
CLK1-210ENST00000473565 NEDD1Q8NHV4 660 aa7.19□□□□□ -1.26
CLK1-210ENST00000473565 SLC16A10Q8TF71 515 aa7.19□□□□□ -1.26
CLK1-210ENST00000473565 TNMDQ9H2S6 317 aa7.19□□□□□ -1.26
CLK1-210ENST00000473565 VAT1LQ9HCJ6 419 aa7.19□□□□□ -1.26
CLK1-210ENST00000473565 CABP5Q9NP86 173 aa7.19□□□□□ -1.26
CLK1-210ENST00000473565 POLR3EQ9NVU0 708 aa7.19□□□□□ -1.26
CLK1-210ENST00000473565 SERPINB13Q9UIV8 391 aa7.19□□□□□ -1.26
CLK1-210ENST00000473565 FRMPD2Q68DX3 1309 aaPredicted RBP7.19□□□□□ -1.26
CLK1-210ENST00000473565 USP17L5A8MUK1 530 aa7.19□□□□□ -1.26
CLK1-210ENST00000473565 NDUFA8P51970 172 aa7.19□□□□□ -1.26
CLK1-210ENST00000473565 GRIN1Q05586 938 aa7.19□□□□□ -1.26
CLK1-210ENST00000473565 GRM4Q14833 912 aa7.19□□□□□ -1.26
CLK1-210ENST00000473565 TYW1BQ6NUM6 668 aa7.19□□□□□ -1.26
CLK1-210ENST00000473565 HOMER1Q86YM7 354 aa7.19□□□□□ -1.26
CLK1-210ENST00000473565 RASGRP4Q8TDF6 673 aa7.19□□□□□ -1.26
CLK1-210ENST00000473565 MAP3K14Q99558 947 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms