RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 DDX60LQ5H9U9 1706 aaKnown RBP21.08■□□□□ 0.97
RPUSD3-214ENST00000473522 PARK7Q99497 189 aaKnown RBP21.08■□□□□ 0.97
RPUSD3-214ENST00000473522 ZMYM6O95789 1325 aa21.07■□□□□ 0.96
RPUSD3-214ENST00000473522 ADGRA2Q96PE1 1338 aa21.07■□□□□ 0.96
RPUSD3-214ENST00000473522 CDK5RAP2Q96SN8 1893 aa21.07■□□□□ 0.96
RPUSD3-214ENST00000473522 A0A1W2PRG0 241 aa21.07■□□□□ 0.96
RPUSD3-214ENST00000473522 SLC3A2P08195 630 aaKnown RBP21.07■□□□□ 0.96
RPUSD3-214ENST00000473522 CYP2C8P10632 490 aa21.07■□□□□ 0.96
RPUSD3-214ENST00000473522 PABPC4Q13310 644 aaKnown RBP eCLIP21.07■□□□□ 0.96
RPUSD3-214ENST00000473522 DGKZQ13574 1117 aa21.07■□□□□ 0.96
RPUSD3-214ENST00000473522 ZNF444Q8N0Y2 327 aaPredicted RBP21.07■□□□□ 0.96
RPUSD3-214ENST00000473522 KANSL2Q9H9L4 492 aa21.07■□□□□ 0.96
RPUSD3-214ENST00000473522 TMOD4Q9NZQ9 345 aa21.07■□□□□ 0.96
RPUSD3-214ENST00000473522 PDE4BQ07343 736 aa21.06■□□□□ 0.96
RPUSD3-214ENST00000473522 PPP4R2Q9NY27 417 aa21.06■□□□□ 0.96
RPUSD3-214ENST00000473522 TMX2Q9Y320 296 aa21.06■□□□□ 0.96
RPUSD3-214ENST00000473522 LAMB1P07942 1786 aa21.05■□□□□ 0.96
RPUSD3-214ENST00000473522 DSCC1Q9BVC3 393 aa21.05■□□□□ 0.96
RPUSD3-214ENST00000473522 PNMA3Q9UL41 463 aa21.05■□□□□ 0.96
RPUSD3-214ENST00000473522 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.05■□□□□ 0.96
RPUSD3-214ENST00000473522 IGKV6D-41A0A0C4DH26 115 aa21.04■□□□□ 0.96
RPUSD3-214ENST00000473522 PRDM1O75626 825 aa21.04■□□□□ 0.96
RPUSD3-214ENST00000473522 BCRP11274 1271 aa21.04■□□□□ 0.96
RPUSD3-214ENST00000473522 OSBPP22059 807 aa21.04■□□□□ 0.96
RPUSD3-214ENST00000473522 BMP2KLQ5H9B9 411 aa21.04■□□□□ 0.96
RPUSD3-214ENST00000473522 CTU1Q7Z7A3 348 aaKnown RBP21.04■□□□□ 0.96
RPUSD3-214ENST00000473522 SKAP1Q86WV1 359 aa21.04■□□□□ 0.96
RPUSD3-214ENST00000473522 STK11IPQ8N1F8 1099 aa21.04■□□□□ 0.96
RPUSD3-214ENST00000473522 RUFY2Q8WXA3 655 aa21.04■□□□□ 0.96
RPUSD3-214ENST00000473522 ERO1AQ96HE7 468 aa21.04■□□□□ 0.96
RPUSD3-214ENST00000473522 IL25Q9H293 177 aa21.04■□□□□ 0.96
RPUSD3-214ENST00000473522 ICA1Q05084 483 aa21.03■□□□□ 0.96
RPUSD3-214ENST00000473522 TNS4Q8IZW8 715 aa21.03■□□□□ 0.96
RPUSD3-214ENST00000473522 NEDD1Q8NHV4 660 aa21.03■□□□□ 0.96
RPUSD3-214ENST00000473522 ASCC2Q9H1I8 757 aaPredicted RBP21.03■□□□□ 0.96
RPUSD3-214ENST00000473522 NYAP2Q9P242 653 aa21.03■□□□□ 0.96
RPUSD3-214ENST00000473522 CPA4Q9UI42 421 aa21.03■□□□□ 0.96
RPUSD3-214ENST00000473522 TACC3Q9Y6A5 838 aa21.03■□□□□ 0.96
RPUSD3-214ENST00000473522 MYH1P12882 1939 aa21.03■□□□□ 0.96
RPUSD3-214ENST00000473522 RAD50Q92878 1312 aa21.03■□□□□ 0.96
RPUSD3-214ENST00000473522 ORC4O43929 436 aa21.02■□□□□ 0.96
RPUSD3-214ENST00000473522 EEF2P13639 858 aaKnown RBP21.02■□□□□ 0.96
RPUSD3-214ENST00000473522 CTDSPL2Q05D32 466 aa21.02■□□□□ 0.96
RPUSD3-214ENST00000473522 PKN2Q16513 984 aaKnown RBP21.02■□□□□ 0.96
RPUSD3-214ENST00000473522 MKL1Q969V6 931 aa21.02■□□□□ 0.96
RPUSD3-214ENST00000473522 P2RX7Q99572 595 aaKnown RBP21.02■□□□□ 0.96
RPUSD3-214ENST00000473522 FEZ1Q99689 392 aa21.02■□□□□ 0.96
RPUSD3-214ENST00000473522 SH2D4AQ9H788 454 aa21.02■□□□□ 0.96
RPUSD3-214ENST00000473522 ARHGEF10LQ9HCE6 1279 aa21.02■□□□□ 0.96
RPUSD3-214ENST00000473522 INCENPQ9NQS7 918 aa21.02■□□□□ 0.96
RPUSD3-214ENST00000473522 DOCK1Q14185 1865 aa21.02■□□□□ 0.96
RPUSD3-214ENST00000473522 MYH7P12883 1935 aa21.02■□□□□ 0.95
RPUSD3-214ENST00000473522 USP17L15C9J2P7 530 aa21.01■□□□□ 0.95
RPUSD3-214ENST00000473522 USP17L13C9JLJ4 530 aa21.01■□□□□ 0.95
RPUSD3-214ENST00000473522 USP17L11C9JVI0 530 aa21.01■□□□□ 0.95
RPUSD3-214ENST00000473522 USP17L18D6R9N7 530 aa21.01■□□□□ 0.95
RPUSD3-214ENST00000473522 USP17L22D6RA61 530 aa21.01■□□□□ 0.95
RPUSD3-214ENST00000473522 USP17L17D6RBQ6 530 aa21.01■□□□□ 0.95
RPUSD3-214ENST00000473522 USP17L19D6RCP7 530 aa21.01■□□□□ 0.95
RPUSD3-214ENST00000473522 USP17L20D6RJB6 530 aa21.01■□□□□ 0.95
RPUSD3-214ENST00000473522 SGSM2O43147 1006 aa21.01■□□□□ 0.95
RPUSD3-214ENST00000473522 GCLCP48506 637 aaPredicted RBP21.01■□□□□ 0.95
RPUSD3-214ENST00000473522 LACTBP83111 547 aaPredicted RBP21.01■□□□□ 0.95
RPUSD3-214ENST00000473522 CAP1Q01518 475 aa21.01■□□□□ 0.95
RPUSD3-214ENST00000473522 TFAP4Q01664 338 aa21.01■□□□□ 0.95
RPUSD3-214ENST00000473522 USP17L24Q0WX57 530 aa21.01■□□□□ 0.95
RPUSD3-214ENST00000473522 CATSPERGQ6ZRH7 1159 aa21.01■□□□□ 0.95
RPUSD3-214ENST00000473522 PCP11498 1178 aaKnown RBP21■□□□□ 0.95
RPUSD3-214ENST00000473522 VCAM1P19320 739 aa21■□□□□ 0.95
RPUSD3-214ENST00000473522 ARHGEF6Q15052 776 aa21■□□□□ 0.95
RPUSD3-214ENST00000473522 CD99L2Q8TCZ2 262 aa21■□□□□ 0.95
RPUSD3-214ENST00000473522 SMCR8Q8TEV9 937 aaPredicted RBP21■□□□□ 0.95
RPUSD3-214ENST00000473522 LPAR1Q92633 364 aa21■□□□□ 0.95
RPUSD3-214ENST00000473522 MCOLN1Q9GZU1 580 aa21■□□□□ 0.95
RPUSD3-214ENST00000473522 VCPKMTQ9H867 229 aa21■□□□□ 0.95
RPUSD3-214ENST00000473522 MTMR4Q9NYA4 1195 aa21■□□□□ 0.95
RPUSD3-214ENST00000473522 CTNNA3Q9UI47 895 aa21■□□□□ 0.95
RPUSD3-214ENST00000473522 NAV1Q8NEY1 1877 aa21■□□□□ 0.95
RPUSD3-214ENST00000473522 ZNF213O14771 459 aa20.99■□□□□ 0.95
RPUSD3-214ENST00000473522 ZYXQ15942 572 aaKnown RBP20.99■□□□□ 0.95
RPUSD3-214ENST00000473522 KIAA1755Q5JYT7 1200 aa20.99■□□□□ 0.95
RPUSD3-214ENST00000473522 CLEC10AQ8IUN9 316 aa20.99■□□□□ 0.95
RPUSD3-214ENST00000473522 NBPF3Q9H094 633 aa20.99■□□□□ 0.95
RPUSD3-214ENST00000473522 SYNPO2Q9UMS6 1093 aa20.99■□□□□ 0.95
RPUSD3-214ENST00000473522 GNRH1P01148 92 aa20.98■□□□□ 0.95
RPUSD3-214ENST00000473522 TSPY3P0CV98 308 aa20.98■□□□□ 0.95
RPUSD3-214ENST00000473522 TSPY8P0CW00 308 aa20.98■□□□□ 0.95
RPUSD3-214ENST00000473522 NOVP48745 357 aa20.98■□□□□ 0.95
RPUSD3-214ENST00000473522 NT5C2P49902 561 aa20.98■□□□□ 0.95
RPUSD3-214ENST00000473522 IRX3P78415 501 aaPredicted RBP20.98■□□□□ 0.95
RPUSD3-214ENST00000473522 FAM47AQ5JRC9 791 aa20.98■□□□□ 0.95
RPUSD3-214ENST00000473522 AKNAD1Q5T1N1 836 aa20.98■□□□□ 0.95
RPUSD3-214ENST00000473522 OTOP1Q7RTM1 612 aa20.98■□□□□ 0.95
RPUSD3-214ENST00000473522 CEP95Q96GE4 821 aa20.98■□□□□ 0.95
RPUSD3-214ENST00000473522 EFCC1Q9HA90 598 aa20.98■□□□□ 0.95
RPUSD3-214ENST00000473522 MORF4L1Q9UBU8 362 aa20.98■□□□□ 0.95
RPUSD3-214ENST00000473522 PHIPQ8WWQ0 1821 aa20.98■□□□□ 0.95
RPUSD3-214ENST00000473522 PLIN4Q96Q06 1357 aa20.97■□□□□ 0.95
RPUSD3-214ENST00000473522 HAND2P61296 217 aa20.97■□□□□ 0.95
RPUSD3-214ENST00000473522 HERVK_113P62684 666 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms