RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 C11orf49Q9H6J7 331 aa8.5□□□□□ -1.05
CKS1B-205ENST00000473344 CWC22Q9HCG8 908 aaKnown RBP8.5□□□□□ -1.05
CKS1B-205ENST00000473344 GPHNQ9NQX3 736 aaPredicted RBP8.5□□□□□ -1.05
CKS1B-205ENST00000473344 ZMYND8Q9ULU4 1186 aaPredicted RBP8.5□□□□□ -1.05
CKS1B-205ENST00000473344 DNAH12Q6ZR08 3092 aa8.5□□□□□ -1.05
CKS1B-205ENST00000473344 DOCK1Q14185 1865 aa8.49□□□□□ -1.05
CKS1B-205ENST00000473344 SOX1O00570 391 aaPredicted RBP8.49□□□□□ -1.05
CKS1B-205ENST00000473344 UQCRFS1P1P0C7P4 283 aa8.49□□□□□ -1.05
CKS1B-205ENST00000473344 SYN1P17600 705 aa8.49□□□□□ -1.05
CKS1B-205ENST00000473344 BMP8BP34820 402 aa8.49□□□□□ -1.05
CKS1B-205ENST00000473344 BACE1P56817 501 aa8.49□□□□□ -1.05
CKS1B-205ENST00000473344 G3BP1Q13283 466 aaKnown RBP eCLIP8.49□□□□□ -1.05
CKS1B-205ENST00000473344 SH3D19Q5HYK7 790 aa8.49□□□□□ -1.05
CKS1B-205ENST00000473344 NAA16Q6N069 864 aaPredicted RBP8.49□□□□□ -1.05
CKS1B-205ENST00000473344 PI16Q6UXB8 463 aa8.49□□□□□ -1.05
CKS1B-205ENST00000473344 TRMT44Q8IYL2 757 aaKnown RBP8.49□□□□□ -1.05
CKS1B-205ENST00000473344 DEFB123Q8N688 67 aa8.49□□□□□ -1.05
CKS1B-205ENST00000473344 GPRC5AQ8NFJ5 357 aa8.49□□□□□ -1.05
CKS1B-205ENST00000473344 SH3RF3Q8TEJ3 882 aaPredicted RBP8.49□□□□□ -1.05
CKS1B-205ENST00000473344 GDF15Q99988 308 aa8.49□□□□□ -1.05
CKS1B-205ENST00000473344 AATFQ9NY61 560 aaKnown RBP eCLIP8.49□□□□□ -1.05
CKS1B-205ENST00000473344 MORF4L1Q9UBU8 362 aa8.49□□□□□ -1.05
CKS1B-205ENST00000473344 GJD2Q9UKL4 321 aa8.49□□□□□ -1.05
CKS1B-205ENST00000473344 COL2A1P02458 1487 aaPredicted RBP8.49□□□□□ -1.05
CKS1B-205ENST00000473344 MGAMO43451 1857 aa8.49□□□□□ -1.05
CKS1B-205ENST00000473344 C19orf81C9J6K1 198 aa8.48□□□□□ -1.05
CKS1B-205ENST00000473344 USP17L10C9JJH3 530 aa8.48□□□□□ -1.05
CKS1B-205ENST00000473344 PPP1R37O75864 691 aa8.48□□□□□ -1.05
CKS1B-205ENST00000473344 GNAI2P04899 355 aa8.48□□□□□ -1.05
CKS1B-205ENST00000473344 ZKSCAN1P17029 563 aaPredicted RBP8.48□□□□□ -1.05
CKS1B-205ENST00000473344 ARID4AP29374 1257 aaPredicted RBP8.48□□□□□ -1.05
CKS1B-205ENST00000473344 MAPK4P31152 587 aa8.48□□□□□ -1.05
CKS1B-205ENST00000473344 HERVK_113P62684 666 aa8.48□□□□□ -1.05
CKS1B-205ENST00000473344 TRIM32Q13049 653 aa8.48□□□□□ -1.05
CKS1B-205ENST00000473344 CCDC158Q5M9N0 1113 aa8.48□□□□□ -1.05
CKS1B-205ENST00000473344 TTC39AQ5SRH9 613 aa8.48□□□□□ -1.05
CKS1B-205ENST00000473344 ATF7IPQ6VMQ6 1270 aa8.48□□□□□ -1.05
CKS1B-205ENST00000473344 PLPP6Q8IY26 295 aa8.48□□□□□ -1.05
CKS1B-205ENST00000473344 TDHQ8IZJ6 230 aa8.48□□□□□ -1.05
CKS1B-205ENST00000473344 HS6ST3Q8IZP7 471 aa8.48□□□□□ -1.05
CKS1B-205ENST00000473344 ZNF384Q8TF68 577 aa8.48□□□□□ -1.05
CKS1B-205ENST00000473344 TRIB2Q92519 343 aa8.48□□□□□ -1.05
CKS1B-205ENST00000473344 WDR18Q9BV38 432 aa8.48□□□□□ -1.05
CKS1B-205ENST00000473344 UBE2OQ9C0C9 1292 aaKnown RBP8.48□□□□□ -1.05
CKS1B-205ENST00000473344 OGDHLQ9ULD0 1010 aa8.48□□□□□ -1.05
CKS1B-205ENST00000473344 EYSQ5T1H1 3165 aa8.47□□□□□ -1.05
CKS1B-205ENST00000473344 TRIOBPQ9H2D6 2365 aa8.47□□□□□ -1.05
CKS1B-205ENST00000473344 MYH2Q9UKX2 1941 aa8.47□□□□□ -1.05
CKS1B-205ENST00000473344 IPO8O15397 1037 aaKnown RBP8.47□□□□□ -1.05
CKS1B-205ENST00000473344 HLA-DOAP06340 250 aa8.47□□□□□ -1.05
CKS1B-205ENST00000473344 XRCC5P13010 732 aaKnown RBP8.47□□□□□ -1.05
CKS1B-205ENST00000473344 HOXA7P31268 230 aaPredicted RBP8.47□□□□□ -1.05
CKS1B-205ENST00000473344 RGS2P41220 211 aa8.47□□□□□ -1.05
CKS1B-205ENST00000473344 MCAMP43121 646 aa8.47□□□□□ -1.05
CKS1B-205ENST00000473344 MAGEA10P43363 369 aaPredicted RBP8.47□□□□□ -1.05
CKS1B-205ENST00000473344 OS9Q13438 667 aaPredicted RBP8.47□□□□□ -1.05
CKS1B-205ENST00000473344 MTX1Q13505 466 aa8.47□□□□□ -1.05
CKS1B-205ENST00000473344 RRP1BQ14684 758 aaKnown RBP8.47□□□□□ -1.05
CKS1B-205ENST00000473344 LRIT3Q3SXY7 679 aa8.47□□□□□ -1.05
CKS1B-205ENST00000473344 FOXP4Q8IVH2 680 aaPredicted RBP8.47□□□□□ -1.05
CKS1B-205ENST00000473344 MAPKAPK5Q8IW41 473 aa8.47□□□□□ -1.05
CKS1B-205ENST00000473344 GTF3C2Q8WUA4 911 aaPredicted RBP8.47□□□□□ -1.05
CKS1B-205ENST00000473344 TGFBRAP1Q8WUH2 860 aa8.47□□□□□ -1.05
CKS1B-205ENST00000473344 ARHGAP45Q92619 1136 aa8.47□□□□□ -1.05
CKS1B-205ENST00000473344 P2RX7Q99572 595 aaKnown RBP8.47□□□□□ -1.05
CKS1B-205ENST00000473344 PAGR1Q9BTK6 254 aa8.47□□□□□ -1.05
CKS1B-205ENST00000473344 GINM1Q9NU53 330 aa8.47□□□□□ -1.05
CKS1B-205ENST00000473344 PLA2G2EQ9NZK7 142 aa8.47□□□□□ -1.05
CKS1B-205ENST00000473344 CEP290O15078 2479 aa8.47□□□□□ -1.05
CKS1B-205ENST00000473344 GLRX3O76003 335 aaKnown RBP8.46□□□□□ -1.06
CKS1B-205ENST00000473344 GDF11O95390 407 aa8.46□□□□□ -1.06
CKS1B-205ENST00000473344 RARSP54136 660 aaKnown RBP8.46□□□□□ -1.06
CKS1B-205ENST00000473344 ERVK-9P63128 1117 aa8.46□□□□□ -1.06
CKS1B-205ENST00000473344 ERVK-24P63145 666 aa8.46□□□□□ -1.06
CKS1B-205ENST00000473344 CCNA1P78396 465 aa8.46□□□□□ -1.06
CKS1B-205ENST00000473344 MAP3K21Q5TCX8 1036 aa8.46□□□□□ -1.06
CKS1B-205ENST00000473344 WDR78Q5VTH9 848 aa8.46□□□□□ -1.06
CKS1B-205ENST00000473344 PLEKHH3Q7Z736 793 aa8.46□□□□□ -1.06
CKS1B-205ENST00000473344 TRMT2AQ8IZ69 625 aaKnown RBP8.46□□□□□ -1.06
CKS1B-205ENST00000473344 FRAT1Q92837 279 aaPredicted RBP8.46□□□□□ -1.06
CKS1B-205ENST00000473344 FEZ1Q99689 392 aa8.46□□□□□ -1.06
CKS1B-205ENST00000473344 SNRKQ9NRH2 765 aa8.46□□□□□ -1.06
CKS1B-205ENST00000473344 PALD1Q9ULE6 856 aa8.46□□□□□ -1.06
CKS1B-205ENST00000473344 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.46□□□□□ -1.06
CKS1B-205ENST00000473344 FLT1P17948 1338 aa8.46□□□□□ -1.06
CKS1B-205ENST00000473344 VCANP13611 3396 aa8.45□□□□□ -1.06
CKS1B-205ENST00000473344 PHIPQ8WWQ0 1821 aa8.45□□□□□ -1.06
CKS1B-205ENST00000473344 PEX10O60683 326 aa8.45□□□□□ -1.06
CKS1B-205ENST00000473344 PPP4CP60510 307 aa8.45□□□□□ -1.06
CKS1B-205ENST00000473344 CACNB2Q08289 660 aaPredicted RBP8.45□□□□□ -1.06
CKS1B-205ENST00000473344 ZYXQ15942 572 aaKnown RBP8.45□□□□□ -1.06
CKS1B-205ENST00000473344 USP17L2Q6R6M4 530 aa8.45□□□□□ -1.06
CKS1B-205ENST00000473344 Q7L0L9 218 aa8.45□□□□□ -1.06
CKS1B-205ENST00000473344 GPR142Q7Z601 462 aa8.45□□□□□ -1.06
CKS1B-205ENST00000473344 EDC3Q96F86 508 aaKnown RBP8.45□□□□□ -1.06
CKS1B-205ENST00000473344 APBA2Q99767 749 aa8.45□□□□□ -1.06
CKS1B-205ENST00000473344 LBHD1Q9BQE6 289 aaPredicted RBP8.45□□□□□ -1.06
CKS1B-205ENST00000473344 TXNRD2Q9NNW7 524 aa8.45□□□□□ -1.06
CKS1B-205ENST00000473344 RBPJLQ9UBG7 517 aa8.45□□□□□ -1.06
CKS1B-205ENST00000473344 SAP30BPQ9UHR5 308 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms