RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 SLC9A9Q8IVB4 645 aa7.25□□□□□ -1.25
RTF1-203ENST00000473214 STK11IPQ8N1F8 1099 aa7.25□□□□□ -1.25
RTF1-203ENST00000473214 ENAHQ8N8S7 591 aaPredicted RBP7.25□□□□□ -1.25
RTF1-203ENST00000473214 SNRNP27Q8WVK2 155 aaKnown RBP7.25□□□□□ -1.25
RTF1-203ENST00000473214 NACC1Q96RE7 527 aa7.25□□□□□ -1.25
RTF1-203ENST00000473214 MYCBPQ99417 103 aaPredicted RBP7.25□□□□□ -1.25
RTF1-203ENST00000473214 ATG3Q9NT62 314 aa7.25□□□□□ -1.25
RTF1-203ENST00000473214 MSRB2Q9Y3D2 182 aa7.25□□□□□ -1.25
RTF1-203ENST00000473214 CD109Q6YHK3 1445 aa7.25□□□□□ -1.25
RTF1-203ENST00000473214 FIBPO43427 364 aa7.24□□□□□ -1.25
RTF1-203ENST00000473214 KATNA1O75449 491 aa7.24□□□□□ -1.25
RTF1-203ENST00000473214 STAT3P40763 770 aa7.24□□□□□ -1.25
RTF1-203ENST00000473214 LRP8Q14114 963 aa7.24□□□□□ -1.25
RTF1-203ENST00000473214 TAF1CQ15572 869 aaPredicted RBP7.24□□□□□ -1.25
RTF1-203ENST00000473214 GRIK4Q16099 956 aa7.24□□□□□ -1.25
RTF1-203ENST00000473214 C20orf204Q6ZNR8 217 aa7.24□□□□□ -1.25
RTF1-203ENST00000473214 KRT77Q7Z794 578 aa7.24□□□□□ -1.25
RTF1-203ENST00000473214 THNSL2Q86YJ6 484 aa7.24□□□□□ -1.25
RTF1-203ENST00000473214 VPS37AQ8NEZ2 397 aa7.24□□□□□ -1.25
RTF1-203ENST00000473214 SKA1Q96BD8 255 aa7.24□□□□□ -1.25
RTF1-203ENST00000473214 SCLT1Q96NL6 688 aa7.24□□□□□ -1.25
RTF1-203ENST00000473214 SMAD5Q99717 465 aaKnown RBP7.24□□□□□ -1.25
RTF1-203ENST00000473214 CAAP1Q9H8G2 361 aa7.24□□□□□ -1.25
RTF1-203ENST00000473214 GINM1Q9NU53 330 aa7.24□□□□□ -1.25
RTF1-203ENST00000473214 USP25Q9UHP3 1055 aa7.24□□□□□ -1.25
RTF1-203ENST00000473214 SH3BP1Q9Y3L3 701 aa7.24□□□□□ -1.25
RTF1-203ENST00000473214 CFAP43Q8NDM7 1665 aa7.24□□□□□ -1.25
RTF1-203ENST00000473214 RASSF10A6NK89 507 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 PDPK1O15530 556 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 HYAL3O43820 417 aaPredicted RBP7.23□□□□□ -1.25
RTF1-203ENST00000473214 H2AFB1P0C5Y9 115 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 H2AFB2P0C5Z0 115 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 SOX5P35711 763 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 ADH7P40394 386 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 HALP42357 657 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 KCNQ4P56696 695 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 SPEM2Q0P670 501 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 PICALMQ13492 652 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 GFOD2Q3B7J2 385 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 TBCELQ5QJ74 424 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 WWC2Q6AWC2 1192 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 MORC1Q86VD1 984 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 DGKHQ86XP1 1220 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 CELF2-AS1Q8N7Q2 184 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 UBR7Q8N806 425 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 THAP3Q8WTV1 239 aaPredicted RBP7.23□□□□□ -1.25
RTF1-203ENST00000473214 TTC14Q96N46 770 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 CSRNP1Q96S65 589 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 RETREG1Q9H6L5 497 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 ST7Q9NRC1 585 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 AASDHPPTQ9NRN7 309 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 ZNF232Q9UNY5 417 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 SLC45A1Q9Y2W3 748 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 IQGAP2Q13576 1575 aa7.23□□□□□ -1.25
RTF1-203ENST00000473214 SERTM1A2A2V5 107 aa7.22□□□□□ -1.25
RTF1-203ENST00000473214 FOXO3O43524 673 aa7.22□□□□□ -1.25
RTF1-203ENST00000473214 RAPGEF3O95398 923 aa7.22□□□□□ -1.25
RTF1-203ENST00000473214 EPB42P16452 691 aa7.22□□□□□ -1.25
RTF1-203ENST00000473214 SARSP49591 514 aaKnown RBP7.22□□□□□ -1.25
RTF1-203ENST00000473214 GPSM2P81274 684 aa7.22□□□□□ -1.25
RTF1-203ENST00000473214 PURAQ00577 322 aaKnown RBP7.22□□□□□ -1.25
RTF1-203ENST00000473214 PIN1Q13526 163 aaPredicted RBP7.22□□□□□ -1.25
RTF1-203ENST00000473214 PUM3Q15397 648 aaKnown RBP7.22□□□□□ -1.25
RTF1-203ENST00000473214 HYIQ5T013 277 aa7.22□□□□□ -1.25
RTF1-203ENST00000473214 SH3PXD2AQ5TCZ1 1133 aa7.22□□□□□ -1.25
RTF1-203ENST00000473214 MSL1Q68DK7 614 aa7.22□□□□□ -1.25
RTF1-203ENST00000473214 C16orf46Q6P387 395 aa7.22□□□□□ -1.25
RTF1-203ENST00000473214 PDXDC1Q6P996 788 aa7.22□□□□□ -1.25
RTF1-203ENST00000473214 POTEAQ6S8J7 498 aa7.22□□□□□ -1.25
RTF1-203ENST00000473214 TCEAL8Q8IYN2 117 aa7.22□□□□□ -1.25
RTF1-203ENST00000473214 TNS4Q8IZW8 715 aa7.22□□□□□ -1.25
RTF1-203ENST00000473214 SYNPOQ8N3V7 929 aa7.22□□□□□ -1.25
RTF1-203ENST00000473214 MFSD3Q96ES6 412 aa7.22□□□□□ -1.25
RTF1-203ENST00000473214 MPP4Q96JB8 637 aa7.22□□□□□ -1.25
RTF1-203ENST00000473214 YTHDC1Q96MU7 727 aaKnown RBP7.22□□□□□ -1.25
RTF1-203ENST00000473214 ASPSCR1Q9BZE9 553 aa7.22□□□□□ -1.25
RTF1-203ENST00000473214 SAP130Q9H0E3 1048 aa7.22□□□□□ -1.25
RTF1-203ENST00000473214 KBTBD4Q9NVX7 518 aa7.22□□□□□ -1.25
RTF1-203ENST00000473214 C9orf78Q9NZ63 289 aaPredicted RBP7.22□□□□□ -1.25
RTF1-203ENST00000473214 ARAP3Q8WWN8 1544 aa7.22□□□□□ -1.25
RTF1-203ENST00000473214 STRCQ7RTU9 1775 aa7.21□□□□□ -1.25
RTF1-203ENST00000473214 CARMIL2Q6F5E8 1435 aa7.21□□□□□ -1.25
RTF1-203ENST00000473214 A0A1W2PRQ8 180 aa7.21□□□□□ -1.26
RTF1-203ENST00000473214 SMAD7O15105 426 aaKnown RBP7.21□□□□□ -1.26
RTF1-203ENST00000473214 ATICP31939 592 aa7.21□□□□□ -1.26
RTF1-203ENST00000473214 HIRAP54198 1017 aaPredicted RBP7.21□□□□□ -1.26
RTF1-203ENST00000473214 APOBRQ0VD83 1088 aa7.21□□□□□ -1.26
RTF1-203ENST00000473214 NEUROD1Q13562 356 aa7.21□□□□□ -1.26
RTF1-203ENST00000473214 RASGRF1Q13972 1273 aa7.21□□□□□ -1.26
RTF1-203ENST00000473214 TM4SF20Q53R12 229 aa7.21□□□□□ -1.26
RTF1-203ENST00000473214 FAM102BQ5T8I3 360 aa7.21□□□□□ -1.26
RTF1-203ENST00000473214 C1orf53Q5VUE5 145 aa7.21□□□□□ -1.26
RTF1-203ENST00000473214 MMS22LQ6ZRQ5 1243 aa7.21□□□□□ -1.26
RTF1-203ENST00000473214 CHCHD4Q8N4Q1 142 aa7.21□□□□□ -1.26
RTF1-203ENST00000473214 RHPN1Q8TCX5 695 aa7.21□□□□□ -1.26
RTF1-203ENST00000473214 NUDT16Q96DE0 195 aaKnown RBP7.21□□□□□ -1.26
RTF1-203ENST00000473214 HERPUD2Q9BSE4 406 aa7.21□□□□□ -1.26
RTF1-203ENST00000473214 C2orf49Q9BVC5 232 aaPredicted RBP7.21□□□□□ -1.26
RTF1-203ENST00000473214 CDH19Q9H159 772 aa7.21□□□□□ -1.26
RTF1-203ENST00000473214 GOLGA2P5Q9HBQ8 144 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms