RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 PRMT6Q96LA8 375 aaPredicted RBP16.98■□□□□ 0.31
HIF3A-206ENST00000472815 ALG1Q9BT22 464 aa16.98■□□□□ 0.31
HIF3A-206ENST00000472815 SLC26A6Q9BXS9 759 aa16.98■□□□□ 0.31
HIF3A-206ENST00000472815 RNF26Q9BY78 433 aaPredicted RBP16.98■□□□□ 0.31
HIF3A-206ENST00000472815 RBM27Q9P2N5 1060 aaKnown RBP16.98■□□□□ 0.31
HIF3A-206ENST00000472815 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
HIF3A-206ENST00000472815 NMT2O60551 498 aa16.97■□□□□ 0.31
HIF3A-206ENST00000472815 DTNBO60941 627 aa16.97■□□□□ 0.31
HIF3A-206ENST00000472815 RASSF7Q02833 373 aa16.97■□□□□ 0.31
HIF3A-206ENST00000472815 TCP10Q12799 353 aa16.97■□□□□ 0.31
HIF3A-206ENST00000472815 ATL3Q6DD88 541 aa16.97■□□□□ 0.31
HIF3A-206ENST00000472815 FBXO18Q8NFZ0 1043 aa16.97■□□□□ 0.31
HIF3A-206ENST00000472815 IL17RBQ9NRM6 502 aa16.97■□□□□ 0.31
HIF3A-206ENST00000472815 FAM198AQ9UFP1 575 aa16.97■□□□□ 0.31
HIF3A-206ENST00000472815 ATRNL1Q5VV63 1379 aa16.97■□□□□ 0.31
HIF3A-206ENST00000472815 PRPF40AO75400 957 aaKnown RBP16.96■□□□□ 0.31
HIF3A-206ENST00000472815 TOP1P11387 765 aaKnown RBP16.96■□□□□ 0.31
HIF3A-206ENST00000472815 RCSD1Q6JBY9 416 aa16.96■□□□□ 0.31
HIF3A-206ENST00000472815 FERMT3Q86UX7 667 aa16.96■□□□□ 0.31
HIF3A-206ENST00000472815 PHKBQ93100 1093 aa16.96■□□□□ 0.31
HIF3A-206ENST00000472815 SCAND2PQ9GZW5 306 aaPredicted RBP16.96■□□□□ 0.31
HIF3A-206ENST00000472815 CFAP45Q9UL16 551 aa16.96■□□□□ 0.31
HIF3A-206ENST00000472815 DDX49Q9Y6V7 483 aaKnown RBP16.96■□□□□ 0.31
HIF3A-206ENST00000472815 MYH15Q9Y2K3 1946 aa16.96■□□□□ 0.31
HIF3A-206ENST00000472815 MBD3O95983 291 aa16.96■□□□□ 0.3
HIF3A-206ENST00000472815 LMNB1P20700 586 aa16.96■□□□□ 0.3
HIF3A-206ENST00000472815 CACNB3P54284 484 aa16.96■□□□□ 0.3
HIF3A-206ENST00000472815 FOXD4L6Q3SYB3 417 aaPredicted RBP16.96■□□□□ 0.3
HIF3A-206ENST00000472815 FOXD4L3Q6VB84 417 aaPredicted RBP16.96■□□□□ 0.3
HIF3A-206ENST00000472815 TMEM87AQ8NBN3 555 aa16.96■□□□□ 0.3
HIF3A-206ENST00000472815 LMBRD1Q9NUN5 540 aa16.96■□□□□ 0.3
HIF3A-206ENST00000472815 PCDHAC2Q9Y5I4 1007 aa16.96■□□□□ 0.3
HIF3A-206ENST00000472815 FZD9O00144 591 aa16.95■□□□□ 0.3
HIF3A-206ENST00000472815 RESTQ13127 1097 aa16.95■□□□□ 0.3
HIF3A-206ENST00000472815 SAFBQ15424 915 aaKnown RBP eCLIP16.95■□□□□ 0.3
HIF3A-206ENST00000472815 KLHL40Q2TBA0 621 aa16.95■□□□□ 0.3
HIF3A-206ENST00000472815 SPDYE2Q495Y8 402 aa16.95■□□□□ 0.3
HIF3A-206ENST00000472815 BRAPQ7Z569 592 aa16.95■□□□□ 0.3
HIF3A-206ENST00000472815 DPF2Q92785 391 aa16.95■□□□□ 0.3
HIF3A-206ENST00000472815 LZTS2Q9BRK4 669 aa16.95■□□□□ 0.3
HIF3A-206ENST00000472815 ZNF70Q9UC06 446 aaPredicted RBP16.95■□□□□ 0.3
HIF3A-206ENST00000472815 PPFIA3O75145 1194 aa16.94■□□□□ 0.3
HIF3A-206ENST00000472815 TNNI2P48788 182 aa16.94■□□□□ 0.3
HIF3A-206ENST00000472815 DNM1Q05193 864 aaKnown RBP16.94■□□□□ 0.3
HIF3A-206ENST00000472815 GNL2Q13823 731 aaKnown RBP16.94■□□□□ 0.3
HIF3A-206ENST00000472815 TMTC3Q6ZXV5 915 aa16.94■□□□□ 0.3
HIF3A-206ENST00000472815 FAM151AQ8WW52 585 aa16.94■□□□□ 0.3
HIF3A-206ENST00000472815 ZNF396Q96N95 335 aaPredicted RBP16.94■□□□□ 0.3
HIF3A-206ENST00000472815 TMEM47Q9BQJ4 181 aa16.94■□□□□ 0.3
HIF3A-206ENST00000472815 MYOZ2Q9NPC6 264 aa16.94■□□□□ 0.3
HIF3A-206ENST00000472815 HERC5Q9UII4 1024 aaKnown RBP16.94■□□□□ 0.3
HIF3A-206ENST00000472815 PRPF3O43395 683 aaKnown RBP16.93■□□□□ 0.3
HIF3A-206ENST00000472815 SHMT1P34896 483 aa16.93■□□□□ 0.3
HIF3A-206ENST00000472815 FOSBP53539 338 aa16.93■□□□□ 0.3
HIF3A-206ENST00000472815 TNFAIP1Q13829 316 aa16.93■□□□□ 0.3
HIF3A-206ENST00000472815 NBPF11Q86T75 865 aa16.93■□□□□ 0.3
HIF3A-206ENST00000472815 FAM83AQ86UY5 434 aa16.93■□□□□ 0.3
HIF3A-206ENST00000472815 CEP95Q96GE4 821 aa16.93■□□□□ 0.3
HIF3A-206ENST00000472815 CSRNP1Q96S65 589 aa16.93■□□□□ 0.3
HIF3A-206ENST00000472815 MTMR4Q9NYA4 1195 aa16.93■□□□□ 0.3
HIF3A-206ENST00000472815 CNPY2Q9Y2B0 182 aa16.93■□□□□ 0.3
HIF3A-206ENST00000472815 SIPA1L1O43166 1804 aa16.93■□□□□ 0.3
HIF3A-206ENST00000472815 DDTLA6NHG4 134 aaPredicted RBP16.93■□□□□ 0.3
HIF3A-206ENST00000472815 MPHOSPH10O00566 681 aaKnown RBP16.93■□□□□ 0.3
HIF3A-206ENST00000472815 TTLL1O95922 423 aa16.93■□□□□ 0.3
HIF3A-206ENST00000472815 NOVP48745 357 aa16.93■□□□□ 0.3
HIF3A-206ENST00000472815 ZNF280AP59817 542 aaPredicted RBP16.93■□□□□ 0.3
HIF3A-206ENST00000472815 GRM4Q14833 912 aa16.93■□□□□ 0.3
HIF3A-206ENST00000472815 CERKLQ49MI3 558 aaPredicted RBP16.93■□□□□ 0.3
HIF3A-206ENST00000472815 METTL16Q86W50 562 aaKnown RBP16.93■□□□□ 0.3
HIF3A-206ENST00000472815 ZFPM1Q8IX07 1006 aa16.93■□□□□ 0.3
HIF3A-206ENST00000472815 GREB1LQ9C091 1923 aaPredicted RBP16.92■□□□□ 0.3
HIF3A-206ENST00000472815 CLRN2A0PK11 232 aa16.92■□□□□ 0.3
HIF3A-206ENST00000472815 TCP10L2B9ZVM9 353 aa16.92■□□□□ 0.3
HIF3A-206ENST00000472815 FIBPO43427 364 aa16.92■□□□□ 0.3
HIF3A-206ENST00000472815 GUCY1B3Q02153 619 aa16.92■□□□□ 0.3
HIF3A-206ENST00000472815 USP48Q86UV5 1035 aa16.92■□□□□ 0.3
HIF3A-206ENST00000472815 CCDC82Q8N4S0 544 aa16.92■□□□□ 0.3
HIF3A-206ENST00000472815 VEZTQ9HBM0 779 aa16.92■□□□□ 0.3
HIF3A-206ENST00000472815 ELP1O95163 1332 aa16.91■□□□□ 0.3
HIF3A-206ENST00000472815 AKR1B1P15121 316 aa16.91■□□□□ 0.3
HIF3A-206ENST00000472815 PRELPP51888 382 aa16.91■□□□□ 0.3
HIF3A-206ENST00000472815 KRT40Q6A162 431 aa16.91■□□□□ 0.3
HIF3A-206ENST00000472815 TATDN1Q6P1N9 297 aa16.91■□□□□ 0.3
HIF3A-206ENST00000472815 GJA3Q9Y6H8 435 aa16.91■□□□□ 0.3
HIF3A-206ENST00000472815 MYH4Q9Y623 1939 aa16.9■□□□□ 0.3
HIF3A-206ENST00000472815 IGKV6D-41A0A0C4DH26 115 aa16.9■□□□□ 0.3
HIF3A-206ENST00000472815 WNT10BO00744 389 aa16.9■□□□□ 0.3
HIF3A-206ENST00000472815 PARP1P09874 1014 aaKnown RBP16.9■□□□□ 0.3
HIF3A-206ENST00000472815 UBE2HP62256 183 aa16.9■□□□□ 0.3
HIF3A-206ENST00000472815 TMEM179Q6ZVK1 233 aa16.9■□□□□ 0.3
HIF3A-206ENST00000472815 SYAP1Q96A49 352 aaPredicted RBP16.9■□□□□ 0.3
HIF3A-206ENST00000472815 ZBED3Q96IU2 234 aaPredicted RBP16.9■□□□□ 0.3
HIF3A-206ENST00000472815 SPATA32Q96LK8 384 aa16.9■□□□□ 0.3
HIF3A-206ENST00000472815 KANSL2Q9H9L4 492 aa16.9■□□□□ 0.3
HIF3A-206ENST00000472815 BRMS1Q9HCU9 246 aa16.9■□□□□ 0.3
HIF3A-206ENST00000472815 CABP5Q9NP86 173 aa16.9■□□□□ 0.3
HIF3A-206ENST00000472815 PLEKHA8P1O95397 391 aa16.9■□□□□ 0.3
HIF3A-206ENST00000472815 GMPSP49915 693 aaPredicted RBP16.9■□□□□ 0.3
HIF3A-206ENST00000472815 SH3BP5LQ7L8J4 393 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms