RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 EMILIN3Q9NT22 766 aa23.29■■□□□ 1.32
COMMD1-208ENST00000472729 SUPT16HQ9Y5B9 1047 aaKnown RBP23.29■■□□□ 1.32
COMMD1-208ENST00000472729 CTGFP29279 349 aa23.28■■□□□ 1.32
COMMD1-208ENST00000472729 HERVK_113P62684 666 aa23.28■■□□□ 1.32
COMMD1-208ENST00000472729 GIMAP6Q6P9H5 292 aa23.28■■□□□ 1.32
COMMD1-208ENST00000472729 CTR9Q6PD62 1173 aa23.28■■□□□ 1.32
COMMD1-208ENST00000472729 SLC44A5Q8NCS7 719 aa23.28■■□□□ 1.32
COMMD1-208ENST00000472729 GPRC5AQ8NFJ5 357 aa23.28■■□□□ 1.32
COMMD1-208ENST00000472729 PI4K2BQ8TCG2 481 aa23.28■■□□□ 1.32
COMMD1-208ENST00000472729 OSBP2Q969R2 916 aa23.28■■□□□ 1.32
COMMD1-208ENST00000472729 P2RX7Q99572 595 aaKnown RBP23.28■■□□□ 1.32
COMMD1-208ENST00000472729 MKNK2Q9HBH9 465 aa23.28■■□□□ 1.32
COMMD1-208ENST00000472729 ZNF287Q9HBT7 754 aa23.28■■□□□ 1.32
COMMD1-208ENST00000472729 ARHGEF10LQ9HCE6 1279 aa23.28■■□□□ 1.32
COMMD1-208ENST00000472729 MINDY4BA8MYZ0 360 aa23.27■■□□□ 1.32
COMMD1-208ENST00000472729 GPAA1O43292 621 aa23.27■■□□□ 1.32
COMMD1-208ENST00000472729 CDK8P49336 464 aa23.27■■□□□ 1.32
COMMD1-208ENST00000472729 B4GALNT3Q6L9W6 998 aa23.27■■□□□ 1.32
COMMD1-208ENST00000472729 SLAIN1Q8ND83 568 aa23.27■■□□□ 1.32
COMMD1-208ENST00000472729 EXOC6Q8TAG9 804 aa23.27■■□□□ 1.32
COMMD1-208ENST00000472729 CYP2D7A0A087X1C5 515 aa23.26■■□□□ 1.31
COMMD1-208ENST00000472729 FLT3LGP49771 235 aa23.26■■□□□ 1.31
COMMD1-208ENST00000472729 ACER1Q8TDN7 264 aa23.26■■□□□ 1.31
COMMD1-208ENST00000472729 EVI5LQ96CN4 794 aa23.26■■□□□ 1.31
COMMD1-208ENST00000472729 C12orf42Q96LP6 360 aa23.26■■□□□ 1.31
COMMD1-208ENST00000472729 PAGR1Q9BTK6 254 aa23.26■■□□□ 1.31
COMMD1-208ENST00000472729 ATP2B2Q01814 1243 aa23.25■■□□□ 1.31
COMMD1-208ENST00000472729 ICA1Q05084 483 aa23.25■■□□□ 1.31
COMMD1-208ENST00000472729 C16orf86Q6ZW13 317 aa23.25■■□□□ 1.31
COMMD1-208ENST00000472729 LNPKQ9C0E8 428 aa23.25■■□□□ 1.31
COMMD1-208ENST00000472729 MYO5AQ9Y4I1 1855 aaKnown RBP23.24■■□□□ 1.31
COMMD1-208ENST00000472729 PATL2C9JE40 543 aaKnown RBP23.24■■□□□ 1.31
COMMD1-208ENST00000472729 ADCY3O60266 1144 aa23.24■■□□□ 1.31
COMMD1-208ENST00000472729 SLC3A2P08195 630 aaKnown RBP23.24■■□□□ 1.31
COMMD1-208ENST00000472729 VCAM1P19320 739 aa23.24■■□□□ 1.31
COMMD1-208ENST00000472729 CCNA1P78396 465 aa23.24■■□□□ 1.31
COMMD1-208ENST00000472729 EVX2Q03828 476 aa23.24■■□□□ 1.31
COMMD1-208ENST00000472729 MORF4L1Q9UBU8 362 aa23.24■■□□□ 1.31
COMMD1-208ENST00000472729 GABRQQ9UN88 632 aa23.24■■□□□ 1.31
COMMD1-208ENST00000472729 POTEFA5A3E0 1075 aa23.23■■□□□ 1.31
COMMD1-208ENST00000472729 GSG1L2A8MUP6 293 aa23.23■■□□□ 1.31
COMMD1-208ENST00000472729 AKR1B1P15121 316 aa23.23■■□□□ 1.31
COMMD1-208ENST00000472729 PDE1AP54750 535 aa23.23■■□□□ 1.31
COMMD1-208ENST00000472729 SBK1Q52WX2 424 aa23.23■■□□□ 1.31
COMMD1-208ENST00000472729 STK11IPQ8N1F8 1099 aa23.23■■□□□ 1.31
COMMD1-208ENST00000472729 TANGO6Q9C0B7 1094 aa23.23■■□□□ 1.31
COMMD1-208ENST00000472729 RPAP3Q9H6T3 665 aaPredicted RBP23.23■■□□□ 1.31
COMMD1-208ENST00000472729 KANSL2Q9H9L4 492 aa23.23■■□□□ 1.31
COMMD1-208ENST00000472729 STAP2Q9UGK3 403 aa23.23■■□□□ 1.31
COMMD1-208ENST00000472729 TRIM6-TRIM34B2RNG4 842 aa23.22■■□□□ 1.31
COMMD1-208ENST00000472729 M0R2C6 588 aa23.22■■□□□ 1.31
COMMD1-208ENST00000472729 RAD21O60216 631 aa23.22■■□□□ 1.31
COMMD1-208ENST00000472729 MAPK4P31152 587 aa23.22■■□□□ 1.31
COMMD1-208ENST00000472729 GUCY1A2P33402 732 aa23.22■■□□□ 1.31
COMMD1-208ENST00000472729 IRF5Q13568 498 aa23.22■■□□□ 1.31
COMMD1-208ENST00000472729 CATSPERGQ6ZRH7 1159 aa23.22■■□□□ 1.31
COMMD1-208ENST00000472729 ZNF444Q8N0Y2 327 aaPredicted RBP23.22■■□□□ 1.31
COMMD1-208ENST00000472729 NKX2-3Q8TAU0 364 aa23.22■■□□□ 1.31
COMMD1-208ENST00000472729 HOXC10Q9NYD6 342 aa23.22■■□□□ 1.31
COMMD1-208ENST00000472729 EN2P19622 333 aaPredicted RBP23.21■■□□□ 1.31
COMMD1-208ENST00000472729 CHD1LQ86WJ1 897 aa23.21■■□□□ 1.31
COMMD1-208ENST00000472729 PXYLP1Q8TE99 480 aa23.21■■□□□ 1.31
COMMD1-208ENST00000472729 LPAR1Q92633 364 aa23.21■■□□□ 1.31
COMMD1-208ENST00000472729 RNF208Q9H0X6 261 aa23.21■■□□□ 1.31
COMMD1-208ENST00000472729 NAPBQ9H115 298 aa23.21■■□□□ 1.31
COMMD1-208ENST00000472729 RABGAP1Q9Y3P9 1069 aa23.21■■□□□ 1.31
COMMD1-208ENST00000472729 ERVK-9P63128 1117 aa23.2■■□□□ 1.3
COMMD1-208ENST00000472729 ERVK-24P63145 666 aa23.2■■□□□ 1.3
COMMD1-208ENST00000472729 ZMYM1Q5SVZ6 1142 aa23.2■■□□□ 1.3
COMMD1-208ENST00000472729 WDR78Q5VTH9 848 aa23.2■■□□□ 1.3
COMMD1-208ENST00000472729 SMC5Q8IY18 1101 aa23.2■■□□□ 1.3
COMMD1-208ENST00000472729 RBPJLQ9UBG7 517 aa23.2■■□□□ 1.3
COMMD1-208ENST00000472729 FOCADQ5VW36 1801 aa23.19■■□□□ 1.3
COMMD1-208ENST00000472729 COG2Q14746 738 aa23.19■■□□□ 1.3
COMMD1-208ENST00000472729 IFNL3Q8IZI9 196 aa23.19■■□□□ 1.3
COMMD1-208ENST00000472729 RILPL2Q969X0 211 aa23.19■■□□□ 1.3
COMMD1-208ENST00000472729 NUDT12Q9BQG2 462 aa23.19■■□□□ 1.3
COMMD1-208ENST00000472729 GOPCQ9HD26 462 aa23.19■■□□□ 1.3
COMMD1-208ENST00000472729 MYH1P12882 1939 aa23.18■■□□□ 1.3
COMMD1-208ENST00000472729 SIPA1L1O43166 1804 aa23.18■■□□□ 1.3
COMMD1-208ENST00000472729 A0A1W2PRG0 241 aa23.18■■□□□ 1.3
COMMD1-208ENST00000472729 CCL5P13501 91 aa23.18■■□□□ 1.3
COMMD1-208ENST00000472729 ELNP15502 786 aa23.18■■□□□ 1.3
COMMD1-208ENST00000472729 PDE4BQ07343 736 aa23.18■■□□□ 1.3
COMMD1-208ENST00000472729 SOCS4Q8WXH5 440 aa23.18■■□□□ 1.3
COMMD1-208ENST00000472729 SEC62Q99442 399 aaKnown RBP23.18■■□□□ 1.3
COMMD1-208ENST00000472729 TXNRD2Q9NNW7 524 aa23.18■■□□□ 1.3
COMMD1-208ENST00000472729 TMX2Q9Y320 296 aa23.18■■□□□ 1.3
COMMD1-208ENST00000472729 SALL3Q9BXA9 1300 aa23.17■■□□□ 1.3
COMMD1-208ENST00000472729 IGHDP01880 384 aa23.17■■□□□ 1.3
COMMD1-208ENST00000472729 EEF2P13639 858 aaKnown RBP23.17■■□□□ 1.3
COMMD1-208ENST00000472729 NUCB1Q02818 461 aa23.17■■□□□ 1.3
COMMD1-208ENST00000472729 MTFR1Q15390 333 aa23.17■■□□□ 1.3
COMMD1-208ENST00000472729 SAMD1Q6SPF0 538 aaPredicted RBP23.17■■□□□ 1.3
COMMD1-208ENST00000472729 SPICE1Q8N0Z3 855 aa23.17■■□□□ 1.3
COMMD1-208ENST00000472729 VCPKMTQ9H867 229 aa23.17■■□□□ 1.3
COMMD1-208ENST00000472729 IVNS1ABPQ9Y6Y0 642 aa23.17■■□□□ 1.3
COMMD1-208ENST00000472729 FLOT1O75955 427 aa23.16■■□□□ 1.3
COMMD1-208ENST00000472729 INHAP05111 366 aa23.16■■□□□ 1.3
COMMD1-208ENST00000472729 PLEKHH3Q7Z736 793 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms