RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 TREML2Q5T2D2 321 aa10□□□□□ -0.81
TSPAN1-205ENST00000472170 C12orf60Q5U649 245 aa10□□□□□ -0.81
TSPAN1-205ENST00000472170 NKX2-3Q8TAU0 364 aa10□□□□□ -0.81
TSPAN1-205ENST00000472170 KIAA1683Q9H0B3 1180 aa10□□□□□ -0.81
TSPAN1-205ENST00000472170 KANSL2Q9H9L4 492 aa10□□□□□ -0.81
TSPAN1-205ENST00000472170 PTCH2Q9Y6C5 1203 aa10□□□□□ -0.81
TSPAN1-205ENST00000472170 PDE4DIPQ5VU43 2346 aa9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 GPAA1O43292 621 aa9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 PRKAB2O43741 272 aa9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 RAD21O60216 631 aa9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 GRK4P32298 578 aa9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 SHMT1P34896 483 aa9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 CDK8P49336 464 aa9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 PDE1AP54750 535 aa9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 ATP2B2Q01814 1243 aa9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 GABPAQ06546 454 aa9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 RRP1BQ14684 758 aaKnown RBP9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 SEPT2Q15019 361 aa9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 ZYXQ15942 572 aaKnown RBP9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 SBK1Q52WX2 424 aa9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 TSHZ3Q63HK5 1081 aa9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 CTR9Q6PD62 1173 aa9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 SLAIN1Q8ND83 568 aa9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 RILPL2Q969X0 211 aa9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 ARMC5Q96C12 935 aa9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 NAPBQ9H115 298 aa9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 DNAJC18Q9H819 358 aa9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 GOPCQ9HD26 462 aa9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.99□□□□□ -0.81
TSPAN1-205ENST00000472170 MYH8P13535 1937 aa9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 HIP1O00291 1037 aa9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 MAPK4P31152 587 aa9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 HERVK_113P62684 666 aa9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 COG2Q14746 738 aa9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 C16orf86Q6ZW13 317 aa9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 CHD1LQ86WJ1 897 aa9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 TRMT44Q8IYL2 757 aaKnown RBP9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 IFNL3Q8IZI9 196 aa9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 EXOC6Q8TAG9 804 aa9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 PI4K2BQ8TCG2 481 aa9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 PXYLP1Q8TE99 480 aa9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 LPAR1Q92633 364 aa9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 C12orf42Q96LP6 360 aa9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 P2RX7Q99572 595 aaKnown RBP9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 LNPKQ9C0E8 428 aa9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 ARHGAP39Q9C0H5 1083 aa9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 HELLSQ9NRZ9 838 aa9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 EMILIN3Q9NT22 766 aa9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 STAP2Q9UGK3 403 aa9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 CTDP1Q9Y5B0 961 aaPredicted RBP9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 IVNS1ABPQ9Y6Y0 642 aa9.98□□□□□ -0.81
TSPAN1-205ENST00000472170 PTPRFP10586 1907 aa9.97□□□□□ -0.81
TSPAN1-205ENST00000472170 GSG1L2A8MUP6 293 aa9.97□□□□□ -0.81
TSPAN1-205ENST00000472170 ADCY3O60266 1144 aa9.97□□□□□ -0.81
TSPAN1-205ENST00000472170 CYP2D6P10635 497 aa9.97□□□□□ -0.81
TSPAN1-205ENST00000472170 ICA1Q05084 483 aa9.97□□□□□ -0.81
TSPAN1-205ENST00000472170 MCMDC2Q4G0Z9 681 aa9.97□□□□□ -0.81
TSPAN1-205ENST00000472170 WDR78Q5VTH9 848 aa9.97□□□□□ -0.81
TSPAN1-205ENST00000472170 CATSPERGQ6ZRH7 1159 aa9.97□□□□□ -0.81
TSPAN1-205ENST00000472170 SMC5Q8IY18 1101 aa9.97□□□□□ -0.81
TSPAN1-205ENST00000472170 OSBP2Q969R2 916 aa9.97□□□□□ -0.81
TSPAN1-205ENST00000472170 DYNLL2Q96FJ2 89 aa9.97□□□□□ -0.81
TSPAN1-205ENST00000472170 NUDT12Q9BQG2 462 aa9.97□□□□□ -0.81
TSPAN1-205ENST00000472170 PAGR1Q9BTK6 254 aa9.97□□□□□ -0.81
TSPAN1-205ENST00000472170 TANGO6Q9C0B7 1094 aa9.97□□□□□ -0.81
TSPAN1-205ENST00000472170 SLC5A4Q9NY91 659 aa9.97□□□□□ -0.81
TSPAN1-205ENST00000472170 RABGAP1Q9Y3P9 1069 aa9.97□□□□□ -0.81
TSPAN1-205ENST00000472170 PHIPQ8WWQ0 1821 aa9.97□□□□□ -0.81
TSPAN1-205ENST00000472170 ADGRA2Q96PE1 1338 aa9.97□□□□□ -0.81
TSPAN1-205ENST00000472170 NAV1Q8NEY1 1877 aa9.97□□□□□ -0.81
TSPAN1-205ENST00000472170 BAZ2AQ9UIF9 1905 aaKnown RBP9.96□□□□□ -0.81
TSPAN1-205ENST00000472170 MYCP01106 439 aaPredicted RBP9.96□□□□□ -0.82
TSPAN1-205ENST00000472170 CENPBP07199 599 aaPredicted RBP9.96□□□□□ -0.82
TSPAN1-205ENST00000472170 TSPY3P0CV98 308 aa9.96□□□□□ -0.82
TSPAN1-205ENST00000472170 TSPY8P0CW00 308 aa9.96□□□□□ -0.82
TSPAN1-205ENST00000472170 FLT3LGP49771 235 aa9.96□□□□□ -0.82
TSPAN1-205ENST00000472170 PRKCZQ05513 592 aa9.96□□□□□ -0.82
TSPAN1-205ENST00000472170 IRF5Q13568 498 aa9.96□□□□□ -0.82
TSPAN1-205ENST00000472170 SLFNL1Q499Z3 407 aa9.96□□□□□ -0.82
TSPAN1-205ENST00000472170 ZMYM1Q5SVZ6 1142 aa9.96□□□□□ -0.82
TSPAN1-205ENST00000472170 STK11IPQ8N1F8 1099 aa9.96□□□□□ -0.82
TSPAN1-205ENST00000472170 MB21D1Q8N884 522 aa9.96□□□□□ -0.82
TSPAN1-205ENST00000472170 SH3TC2Q8TF17 1288 aa9.96□□□□□ -0.82
TSPAN1-205ENST00000472170 SOCS4Q8WXH5 440 aa9.96□□□□□ -0.82
TSPAN1-205ENST00000472170 ZNF333Q96JL9 665 aa9.96□□□□□ -0.82
TSPAN1-205ENST00000472170 RNF208Q9H0X6 261 aa9.96□□□□□ -0.82
TSPAN1-205ENST00000472170 RPAP3Q9H6T3 665 aaPredicted RBP9.96□□□□□ -0.82
TSPAN1-205ENST00000472170 MORF4L1Q9UBU8 362 aa9.96□□□□□ -0.82
TSPAN1-205ENST00000472170 FLOT1O75955 427 aa9.95□□□□□ -0.82
TSPAN1-205ENST00000472170 AKR1B1P15121 316 aa9.95□□□□□ -0.82
TSPAN1-205ENST00000472170 VCAM1P19320 739 aa9.95□□□□□ -0.82
TSPAN1-205ENST00000472170 RGS2P41220 211 aa9.95□□□□□ -0.82
TSPAN1-205ENST00000472170 ERVK-9P63128 1117 aa9.95□□□□□ -0.82
TSPAN1-205ENST00000472170 ERVK-24P63145 666 aa9.95□□□□□ -0.82
TSPAN1-205ENST00000472170 JAG1P78504 1218 aa9.95□□□□□ -0.82
TSPAN1-205ENST00000472170 NUCB1Q02818 461 aa9.95□□□□□ -0.82
TSPAN1-205ENST00000472170 PLEKHH3Q7Z736 793 aa9.95□□□□□ -0.82
TSPAN1-205ENST00000472170 SLC44A5Q8NCS7 719 aa9.95□□□□□ -0.82
TSPAN1-205ENST00000472170 ACER1Q8TDN7 264 aa9.95□□□□□ -0.82
TSPAN1-205ENST00000472170 OTUD7AQ8TE49 926 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms