RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 TSGA10IPQ3SY00 556 aa16.58■□□□□ 0.24
SSR4-207ENST00000471724 SPRYD7Q5W111 196 aa16.58■□□□□ 0.24
SSR4-207ENST00000471724 IQCA1Q86XH1 822 aa16.58■□□□□ 0.24
SSR4-207ENST00000471724 SH2D4AQ9H788 454 aa16.58■□□□□ 0.24
SSR4-207ENST00000471724 ARHGEF10LQ9HCE6 1279 aa16.58■□□□□ 0.24
SSR4-207ENST00000471724 PRDM10Q9NQV6 1147 aa16.58■□□□□ 0.24
SSR4-207ENST00000471724 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.58■□□□□ 0.24
SSR4-207ENST00000471724 B4E1Z4 1266 aa16.57■□□□□ 0.24
SSR4-207ENST00000471724 KDM4AO75164 1064 aa16.57■□□□□ 0.24
SSR4-207ENST00000471724 JAG1P78504 1218 aa16.57■□□□□ 0.24
SSR4-207ENST00000471724 TFAP4Q01664 338 aa16.57■□□□□ 0.24
SSR4-207ENST00000471724 KIF23Q02241 960 aaPredicted RBP16.57■□□□□ 0.24
SSR4-207ENST00000471724 SHROOM1Q2M3G4 852 aaPredicted RBP16.57■□□□□ 0.24
SSR4-207ENST00000471724 CCDC178Q5BJE1 867 aa16.57■□□□□ 0.24
SSR4-207ENST00000471724 FAM47AQ5JRC9 791 aa16.57■□□□□ 0.24
SSR4-207ENST00000471724 ZNF280CQ8ND82 737 aa16.57■□□□□ 0.24
SSR4-207ENST00000471724 KCNB2Q92953 911 aa16.57■□□□□ 0.24
SSR4-207ENST00000471724 FEZ1Q99689 392 aa16.57■□□□□ 0.24
SSR4-207ENST00000471724 WDR18Q9BV38 432 aa16.57■□□□□ 0.24
SSR4-207ENST00000471724 TACC3Q9Y6A5 838 aa16.57■□□□□ 0.24
SSR4-207ENST00000471724 ZHX2Q9Y6X8 837 aa16.57■□□□□ 0.24
SSR4-207ENST00000471724 IGKV6D-41A0A0C4DH26 115 aa16.56■□□□□ 0.24
SSR4-207ENST00000471724 GUCY1A2P33402 732 aa16.56■□□□□ 0.24
SSR4-207ENST00000471724 SNAPC2Q13487 334 aa16.56■□□□□ 0.24
SSR4-207ENST00000471724 STOX1Q6ZVD7 989 aa16.56■□□□□ 0.24
SSR4-207ENST00000471724 UBAC1Q9BSL1 405 aa16.56■□□□□ 0.24
SSR4-207ENST00000471724 INCENPQ9NQS7 918 aa16.56■□□□□ 0.24
SSR4-207ENST00000471724 TCP11L1Q9NUJ3 509 aa16.56■□□□□ 0.24
SSR4-207ENST00000471724 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.56■□□□□ 0.24
SSR4-207ENST00000471724 SYNPO2Q9UMS6 1093 aa16.56■□□□□ 0.24
SSR4-207ENST00000471724 KCNH4Q9UQ05 1017 aa16.56■□□□□ 0.24
SSR4-207ENST00000471724 MANSC4A6NHS7 340 aaPredicted RBP16.55■□□□□ 0.24
SSR4-207ENST00000471724 CXCL11O14625 94 aa16.55■□□□□ 0.24
SSR4-207ENST00000471724 IRF6O14896 467 aa16.55■□□□□ 0.24
SSR4-207ENST00000471724 TTLL1O95922 423 aa16.55■□□□□ 0.24
SSR4-207ENST00000471724 HMGB1P09429 215 aaKnown RBP16.55■□□□□ 0.24
SSR4-207ENST00000471724 GTF2A2P52657 109 aa16.55■□□□□ 0.24
SSR4-207ENST00000471724 ANAPC15P60006 121 aa16.55■□□□□ 0.24
SSR4-207ENST00000471724 SART3Q15020 963 aaKnown RBP16.55■□□□□ 0.24
SSR4-207ENST00000471724 CNKSR2Q8WXI2 1034 aa16.55■□□□□ 0.24
SSR4-207ENST00000471724 CEP95Q96GE4 821 aa16.55■□□□□ 0.24
SSR4-207ENST00000471724 NYAP2Q9P242 653 aa16.55■□□□□ 0.24
SSR4-207ENST00000471724 AFG3L2Q9Y4W6 797 aa16.55■□□□□ 0.24
SSR4-207ENST00000471724 SNX14Q9Y5W7 946 aa16.55■□□□□ 0.24
SSR4-207ENST00000471724 TAF6LQ9Y6J9 622 aa16.55■□□□□ 0.24
SSR4-207ENST00000471724 WDR19Q8NEZ3 1342 aa16.54■□□□□ 0.24
SSR4-207ENST00000471724 TRIM75PA6NK02 468 aa16.54■□□□□ 0.24
SSR4-207ENST00000471724 C19orf81C9J6K1 198 aa16.54■□□□□ 0.24
SSR4-207ENST00000471724 USP17L10C9JJH3 530 aa16.54■□□□□ 0.24
SSR4-207ENST00000471724 SEC24BO95487 1268 aa16.54■□□□□ 0.24
SSR4-207ENST00000471724 HSPA8P11142 646 aaKnown RBP16.54■□□□□ 0.24
SSR4-207ENST00000471724 CETPP11597 493 aa16.54■□□□□ 0.24
SSR4-207ENST00000471724 PSMA5P28066 241 aa16.54■□□□□ 0.24
SSR4-207ENST00000471724 MCM5P33992 734 aa16.54■□□□□ 0.24
SSR4-207ENST00000471724 GJA5P36382 358 aa16.54■□□□□ 0.24
SSR4-207ENST00000471724 USP14P54578 494 aa16.54■□□□□ 0.24
SSR4-207ENST00000471724 SREBF2Q12772 1141 aa16.54■□□□□ 0.24
SSR4-207ENST00000471724 SPP2Q13103 211 aa16.54■□□□□ 0.24
SSR4-207ENST00000471724 CCDC84Q86UT8 332 aaPredicted RBP16.54■□□□□ 0.24
SSR4-207ENST00000471724 MB21D2Q8IYB1 491 aaPredicted RBP16.54■□□□□ 0.24
SSR4-207ENST00000471724 NEK1Q96PY6 1258 aa16.54■□□□□ 0.24
SSR4-207ENST00000471724 MTA3Q9BTC8 594 aa16.54■□□□□ 0.24
SSR4-207ENST00000471724 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.54■□□□□ 0.24
SSR4-207ENST00000471724 KIAA1683Q9H0B3 1180 aa16.54■□□□□ 0.24
SSR4-207ENST00000471724 SAGE1Q9NXZ1 904 aa16.54■□□□□ 0.24
SSR4-207ENST00000471724 MTMR4Q9NYA4 1195 aa16.54■□□□□ 0.24
SSR4-207ENST00000471724 PARP14Q460N5 1801 aa16.54■□□□□ 0.24
SSR4-207ENST00000471724 ERICH2A1L162 156 aa16.53■□□□□ 0.24
SSR4-207ENST00000471724 EEF2P13639 858 aaKnown RBP16.53■□□□□ 0.24
SSR4-207ENST00000471724 LBX1P52954 281 aa16.53■□□□□ 0.24
SSR4-207ENST00000471724 BACE1P56817 501 aa16.53■□□□□ 0.24
SSR4-207ENST00000471724 ATP2B2Q01814 1243 aa16.53■□□□□ 0.24
SSR4-207ENST00000471724 MTMR2Q13614 643 aa16.53■□□□□ 0.24
SSR4-207ENST00000471724 CLEC10AQ8IUN9 316 aa16.53■□□□□ 0.24
SSR4-207ENST00000471724 RASEFQ8IZ41 740 aa16.53■□□□□ 0.24
SSR4-207ENST00000471724 ZIC5Q96T25 663 aa16.53■□□□□ 0.24
SSR4-207ENST00000471724 BACH2Q9BYV9 841 aa16.53■□□□□ 0.24
SSR4-207ENST00000471724 GOPCQ9HD26 462 aa16.53■□□□□ 0.24
SSR4-207ENST00000471724 ZSWIM5Q9P217 1185 aa16.53■□□□□ 0.24
SSR4-207ENST00000471724 STX8Q9UNK0 236 aa16.53■□□□□ 0.24
SSR4-207ENST00000471724 TNKSO95271 1327 aa16.52■□□□□ 0.24
SSR4-207ENST00000471724 A0A0G2JLL6 359 aaPredicted RBP16.52■□□□□ 0.24
SSR4-207ENST00000471724 INHBEP58166 350 aa16.52■□□□□ 0.24
SSR4-207ENST00000471724 MKRN3Q13064 507 aaKnown RBP16.52■□□□□ 0.24
SSR4-207ENST00000471724 SH3D19Q5HYK7 790 aa16.52■□□□□ 0.24
SSR4-207ENST00000471724 USP17L2Q6R6M4 530 aa16.52■□□□□ 0.24
SSR4-207ENST00000471724 FASTKD5Q7L8L6 764 aaKnown RBP16.52■□□□□ 0.24
SSR4-207ENST00000471724 PRRT2Q7Z6L0 340 aaPredicted RBP16.52■□□□□ 0.24
SSR4-207ENST00000471724 PROCA1Q8NCQ7 364 aaPredicted RBP16.52■□□□□ 0.24
SSR4-207ENST00000471724 JAKMIP1Q96N16 626 aaKnown RBP16.52■□□□□ 0.24
SSR4-207ENST00000471724 TTC14Q96N46 770 aa16.52■□□□□ 0.24
SSR4-207ENST00000471724 ZSCAN10Q96SZ4 725 aaPredicted RBP16.52■□□□□ 0.24
SSR4-207ENST00000471724 TMOD4Q9NZQ9 345 aa16.52■□□□□ 0.24
SSR4-207ENST00000471724 TMX2Q9Y320 296 aa16.52■□□□□ 0.24
SSR4-207ENST00000471724 PCNTO95613 3336 aa16.51■□□□□ 0.23
SSR4-207ENST00000471724 CCL15-CCL14A0A0B4J2E2 113 aa16.51■□□□□ 0.23
SSR4-207ENST00000471724 PRC1O43663 620 aa16.51■□□□□ 0.23
SSR4-207ENST00000471724 NMT2O60551 498 aa16.51■□□□□ 0.23
SSR4-207ENST00000471724 NOVP48745 357 aa16.51■□□□□ 0.23
SSR4-207ENST00000471724 HMGCS2P54868 508 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms