RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 TNNI3KQ59H18 835 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 RSRC2Q7L4I2 434 aaKnown RBP9.55□□□□□ -0.88
CD47-204ENST00000471694 APOBEC3FQ8IUX4 373 aaKnown RBP9.55□□□□□ -0.88
CD47-204ENST00000471694 FPGT-TNNI3KV9GXZ4 949 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 V9GY48 417 aaPredicted RBP9.55□□□□□ -0.88
CD47-204ENST00000471694 ZNF277Q9NRM2 450 aaPredicted RBP9.55□□□□□ -0.88
CD47-204ENST00000471694 ANAPC4Q9UJX5 808 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 SLFN13Q68D06 897 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 TRIM50Q86XT4 487 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 GTPBP4Q9BZE4 634 aaKnown RBP9.55□□□□□ -0.88
CD47-204ENST00000471694 LEMD3Q9Y2U8 911 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 PCDHA1Q9Y5I3 950 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 ZNF532Q9HCE3 1301 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 PIK3C2GO75747 1445 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 EXOC3O60645 756 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 UBXN1Q04323 297 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 CHRNDQ07001 517 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 EHBP1Q8NDI1 1231 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 CHMP6Q96FZ7 201 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 TMEM2Q9UHN6 1383 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 NONOQ15233 471 aaKnown RBP eCLIP9.55□□□□□ -0.88
CD47-204ENST00000471694 KRT25Q7Z3Z0 450 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 SRP68Q9UHB9 627 aaKnown RBP9.55□□□□□ -0.88
CD47-204ENST00000471694 ARHGEF37A1IGU5 675 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 BNIP3LO60238 219 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 GIGYF1O75420 1035 aaPredicted RBP9.55□□□□□ -0.88
CD47-204ENST00000471694 USP17L8P0C7I0 530 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 PHKG2P15735 406 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 RNF219Q5W0B1 726 aaPredicted RBP9.55□□□□□ -0.88
CD47-204ENST00000471694 SCYL2Q6P3W7 929 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 EXOC8Q8IYI6 725 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 RBM46Q8TBY0 533 aaKnown RBP9.55□□□□□ -0.88
CD47-204ENST00000471694 SNX25Q9H3E2 840 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 ZFYVE28Q9HCC9 887 aa9.55□□□□□ -0.88
CD47-204ENST00000471694 GPAA1O43292 621 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 SDSP20132 328 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 IRX5P78411 483 aaPredicted RBP9.54□□□□□ -0.88
CD47-204ENST00000471694 PRR16Q569H4 304 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 C7orf31Q8N865 590 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 UBXN4Q92575 508 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 GJD4Q96KN9 370 aaPredicted RBP9.54□□□□□ -0.88
CD47-204ENST00000471694 SEPT10Q9P0V9 454 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 NDUFB9Q9Y6M9 179 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 RALGAPBQ86X10 1494 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 KDM6BO15054 1643 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 TTC41PQ6P2S7 1318 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 TNPO2O14787 897 aaKnown RBP9.54□□□□□ -0.88
CD47-204ENST00000471694 SPOPO43791 374 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 KRT10P13645 584 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 KRT81Q14533 505 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 MAP3K7O43318 606 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 ERCC5P28715 1186 aaPredicted RBP9.54□□□□□ -0.88
CD47-204ENST00000471694 ITIH3Q06033 890 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 DMP1Q13316 513 aaPredicted RBP9.54□□□□□ -0.88
CD47-204ENST00000471694 CASC4Q6P4E1 433 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 CEP57Q86XR8 500 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 MRPL50Q8N5N7 158 aaKnown RBP9.54□□□□□ -0.88
CD47-204ENST00000471694 PSTPIP2Q9H939 334 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.54□□□□□ -0.88
CD47-204ENST00000471694 SLC12A6Q9UHW9 1150 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 ASAP1Q9ULH1 1129 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 TMEM191BP0C7N4 346 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 AOC3Q16853 763 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 SPATA24Q86W54 205 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 EXOC4Q96A65 974 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 HESX1Q9UBX0 185 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 ZFYVE9O95405 1425 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 BICRAQ9NZM4 1560 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 YY1P25490 414 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 SATB1Q01826 763 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 ZNF467Q7Z7K2 595 aaPredicted RBP9.54□□□□□ -0.88
CD47-204ENST00000471694 PGBD3Q8N328 593 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 KLHDC4Q8TBB5 520 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 OTUD5Q96G74 571 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 NCAPGQ9BPX3 1015 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 INPP5FQ9Y2H2 1132 aa9.54□□□□□ -0.88
CD47-204ENST00000471694 SHTN1A0MZ66 631 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 KRT24Q2M2I5 525 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 CNNM4Q6P4Q7 775 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 SRGAP1Q7Z6B7 1085 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 CSRNP2Q9H175 543 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 ITM2BQ9Y287 266 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 IBTKQ9P2D0 1353 aaPredicted RBP9.53□□□□□ -0.88
CD47-204ENST00000471694 DEXIO95424 95 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 MARK3P27448 753 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 SPAG1Q07617 926 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 PLA2G4DQ86XP0 818 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 CEP112Q8N8E3 955 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 CCDC85CA6NKD9 419 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 TNNC1P63316 161 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 SREBF2Q12772 1141 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 NFX1Q12986 1120 aaKnown RBP9.53□□□□□ -0.88
CD47-204ENST00000471694 PTPN14Q15678 1187 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 CCDC157Q569K6 752 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 CCDC25Q86WR0 208 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 ZNF341Q9BYN7 854 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 CPSF3Q9UKF6 684 aaKnown RBP9.53□□□□□ -0.88
CD47-204ENST00000471694 UBN2Q6ZU65 1347 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 HEXIM1O94992 359 aaKnown RBP9.53□□□□□ -0.88
CD47-204ENST00000471694 LTKP29376 864 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms