RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 USP17L21D6R901 530 aa28.13■■■□□ 2.09
RNF220-208ENST00000471494 ZFYP08048 801 aaPredicted RBP28.13■■■□□ 2.09
RNF220-208ENST00000471494 LRRFIP1Q32MZ4 808 aaKnown RBP28.13■■■□□ 2.09
RNF220-208ENST00000471494 C12orf60Q5U649 245 aa28.13■■■□□ 2.09
RNF220-208ENST00000471494 OTUD7AQ8TE49 926 aaPredicted RBP28.13■■■□□ 2.09
RNF220-208ENST00000471494 GTF3C2Q8WUA4 911 aaPredicted RBP28.13■■■□□ 2.09
RNF220-208ENST00000471494 APPBP2Q92624 585 aa28.13■■■□□ 2.09
RNF220-208ENST00000471494 BRCA2P51587 3418 aa28.12■■■□□ 2.09
RNF220-208ENST00000471494 RNF113AO15541 343 aaKnown RBP28.12■■■□□ 2.09
RNF220-208ENST00000471494 ADCY3O60266 1144 aa28.12■■■□□ 2.09
RNF220-208ENST00000471494 GLRX3O76003 335 aaKnown RBP28.12■■■□□ 2.09
RNF220-208ENST00000471494 MX1P20591 662 aa28.12■■■□□ 2.09
RNF220-208ENST00000471494 GUCY1A2P33402 732 aa28.12■■■□□ 2.09
RNF220-208ENST00000471494 UBXN2AP68543 259 aa28.12■■■□□ 2.09
RNF220-208ENST00000471494 IRF5Q13568 498 aa28.12■■■□□ 2.09
RNF220-208ENST00000471494 TMEM179Q6ZVK1 233 aa28.12■■■□□ 2.09
RNF220-208ENST00000471494 CYP2D7A0A087X1C5 515 aa28.11■■■□□ 2.09
RNF220-208ENST00000471494 USP17L15C9J2P7 530 aa28.11■■■□□ 2.09
RNF220-208ENST00000471494 USP17L13C9JLJ4 530 aa28.11■■■□□ 2.09
RNF220-208ENST00000471494 USP17L11C9JVI0 530 aa28.11■■■□□ 2.09
RNF220-208ENST00000471494 USP17L18D6R9N7 530 aa28.11■■■□□ 2.09
RNF220-208ENST00000471494 USP17L22D6RA61 530 aa28.11■■■□□ 2.09
RNF220-208ENST00000471494 USP17L17D6RBQ6 530 aa28.11■■■□□ 2.09
RNF220-208ENST00000471494 USP17L19D6RCP7 530 aa28.11■■■□□ 2.09
RNF220-208ENST00000471494 USP17L20D6RJB6 530 aa28.11■■■□□ 2.09
RNF220-208ENST00000471494 USP17L24Q0WX57 530 aa28.11■■■□□ 2.09
RNF220-208ENST00000471494 HDAC1Q13547 482 aaPredicted RBP28.11■■■□□ 2.09
RNF220-208ENST00000471494 MTFR1Q15390 333 aa28.11■■■□□ 2.09
RNF220-208ENST00000471494 PI4K2BQ8TCG2 481 aa28.11■■■□□ 2.09
RNF220-208ENST00000471494 STRBPQ96SI9 672 aaKnown RBP28.11■■■□□ 2.09
RNF220-208ENST00000471494 VCAM1P19320 739 aa28.1■■■□□ 2.09
RNF220-208ENST00000471494 AAMPQ13685 434 aa28.1■■■□□ 2.09
RNF220-208ENST00000471494 ANKRD45Q5TZF3 282 aa28.1■■■□□ 2.09
RNF220-208ENST00000471494 GPRC5AQ8NFJ5 357 aa28.1■■■□□ 2.09
RNF220-208ENST00000471494 GCC1Q96CN9 775 aa28.1■■■□□ 2.09
RNF220-208ENST00000471494 ARPP21Q9UBL0 812 aaPredicted RBP28.1■■■□□ 2.09
RNF220-208ENST00000471494 PLXNB2O15031 1838 aa28.09■■■□□ 2.09
RNF220-208ENST00000471494 ELNP15502 786 aa28.09■■■□□ 2.09
RNF220-208ENST00000471494 PXYLP1Q8TE99 480 aa28.09■■■□□ 2.09
RNF220-208ENST00000471494 OSBP2Q969R2 916 aa28.09■■■□□ 2.09
RNF220-208ENST00000471494 PAGR1Q9BTK6 254 aa28.09■■■□□ 2.09
RNF220-208ENST00000471494 CCL5P13501 91 aa28.08■■■□□ 2.09
RNF220-208ENST00000471494 CDK8P49336 464 aa28.08■■■□□ 2.09
RNF220-208ENST00000471494 CTR9Q6PD62 1173 aa28.08■■■□□ 2.09
RNF220-208ENST00000471494 C16orf86Q6ZW13 317 aa28.08■■■□□ 2.09
RNF220-208ENST00000471494 CCDC17Q96LX7 622 aa28.08■■■□□ 2.09
RNF220-208ENST00000471494 FSD1Q9BTV5 496 aa28.08■■■□□ 2.09
RNF220-208ENST00000471494 TXNRD2Q9NNW7 524 aa28.08■■■□□ 2.09
RNF220-208ENST00000471494 SMIM22K7EJ46 135 aa28.07■■■□□ 2.08
RNF220-208ENST00000471494 GPAA1O43292 621 aa28.07■■■□□ 2.08
RNF220-208ENST00000471494 AKR1B1P15121 316 aa28.07■■■□□ 2.08
RNF220-208ENST00000471494 RBPJLQ9UBG7 517 aa28.07■■■□□ 2.08
RNF220-208ENST00000471494 PEX10O60683 326 aa28.06■■■□□ 2.08
RNF220-208ENST00000471494 ERVK-9P63128 1117 aa28.06■■■□□ 2.08
RNF220-208ENST00000471494 ERVK-24P63145 666 aa28.06■■■□□ 2.08
RNF220-208ENST00000471494 GIMAP6Q6P9H5 292 aa28.06■■■□□ 2.08
RNF220-208ENST00000471494 CATSPERGQ6ZRH7 1159 aa28.06■■■□□ 2.08
RNF220-208ENST00000471494 CCAR1Q8IX12 1150 aaKnown RBP28.06■■■□□ 2.08
RNF220-208ENST00000471494 RNF208Q9H0X6 261 aa28.06■■■□□ 2.08
RNF220-208ENST00000471494 RPAP3Q9H6T3 665 aaPredicted RBP28.06■■■□□ 2.08
RNF220-208ENST00000471494 ARHGEF10LQ9HCE6 1279 aa28.06■■■□□ 2.08
RNF220-208ENST00000471494 A0A1W2PRG0 241 aa28.05■■■□□ 2.08
RNF220-208ENST00000471494 GSG1L2A8MUP6 293 aa28.05■■■□□ 2.08
RNF220-208ENST00000471494 INHAP05111 366 aa28.05■■■□□ 2.08
RNF220-208ENST00000471494 GNAT2P19087 354 aa28.05■■■□□ 2.08
RNF220-208ENST00000471494 ICA1Q05084 483 aa28.05■■■□□ 2.08
RNF220-208ENST00000471494 PRPF38BQ5VTL8 546 aaKnown RBP28.05■■■□□ 2.08
RNF220-208ENST00000471494 SALL3Q9BXA9 1300 aa28.05■■■□□ 2.08
RNF220-208ENST00000471494 SH2D4AQ9H788 454 aa28.05■■■□□ 2.08
RNF220-208ENST00000471494 MKI67P46013 3256 aaKnown RBP28.04■■■□□ 2.08
RNF220-208ENST00000471494 M0R2C6 588 aa28.04■■■□□ 2.08
RNF220-208ENST00000471494 MAPK4P31152 587 aa28.04■■■□□ 2.08
RNF220-208ENST00000471494 SBK1Q52WX2 424 aa28.04■■■□□ 2.08
RNF220-208ENST00000471494 NKX2-3Q8TAU0 364 aa28.04■■■□□ 2.08
RNF220-208ENST00000471494 GREB1LQ9C091 1923 aaPredicted RBP28.03■■■□□ 2.08
RNF220-208ENST00000471494 GJB1P08034 283 aa28.03■■■□□ 2.08
RNF220-208ENST00000471494 TDO2P48775 406 aa28.03■■■□□ 2.08
RNF220-208ENST00000471494 CLEC10AQ8IUN9 316 aa28.03■■■□□ 2.08
RNF220-208ENST00000471494 RABGAP1Q9Y3P9 1069 aa28.03■■■□□ 2.08
RNF220-208ENST00000471494 APPP05067 770 aa28.02■■■□□ 2.08
RNF220-208ENST00000471494 SOCS4Q8WXH5 440 aa28.02■■■□□ 2.08
RNF220-208ENST00000471494 UNC93B1Q9H1C4 597 aa28.02■■■□□ 2.08
RNF220-208ENST00000471494 CWC22Q9HCG8 908 aaKnown RBP28.02■■■□□ 2.08
RNF220-208ENST00000471494 GJD2Q9UKL4 321 aa28.02■■■□□ 2.08
RNF220-208ENST00000471494 ROBO3Q96MS0 1386 aa28.01■■■□□ 2.07
RNF220-208ENST00000471494 RLFQ13129 1914 aa28.01■■■□□ 2.07
RNF220-208ENST00000471494 MINDY4BA8MYZ0 360 aa28.01■■■□□ 2.07
RNF220-208ENST00000471494 CCNA1P78396 465 aa28.01■■■□□ 2.07
RNF220-208ENST00000471494 Q3C1V9 767 aa28.01■■■□□ 2.07
RNF220-208ENST00000471494 TANGO6Q9C0B7 1094 aa28.01■■■□□ 2.07
RNF220-208ENST00000471494 PORCNQ9H237 461 aa28.01■■■□□ 2.07
RNF220-208ENST00000471494 EPB41L4AQ9HCS5 686 aaPredicted RBP28.01■■■□□ 2.07
RNF220-208ENST00000471494 PARP14Q460N5 1801 aa28.01■■■□□ 2.07
RNF220-208ENST00000471494 GJA8P48165 433 aa28■■■□□ 2.07
RNF220-208ENST00000471494 POTEEQ6S8J3 1075 aa28■■■□□ 2.07
RNF220-208ENST00000471494 LBX2Q6XYB7 198 aa28■■■□□ 2.07
RNF220-208ENST00000471494 LPAR1Q92633 364 aa28■■■□□ 2.07
RNF220-208ENST00000471494 SHISA4Q96DD7 197 aa28■■■□□ 2.07
RNF220-208ENST00000471494 NUDT12Q9BQG2 462 aa28■■■□□ 2.07
RNF220-208ENST00000471494 RWDD1Q9H446 243 aaPredicted RBP28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms