RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 FEZ1Q99689 392 aa21.08■□□□□ 0.97
VPS72-204ENST00000471423 CFHR5Q9BXR6 569 aa21.08■□□□□ 0.97
VPS72-204ENST00000471423 GREB1LQ9C091 1923 aaPredicted RBP21.08■□□□□ 0.96
VPS72-204ENST00000471423 LAMA4Q16363 1823 aa21.07■□□□□ 0.96
VPS72-204ENST00000471423 PDHXO00330 501 aa21.07■□□□□ 0.96
VPS72-204ENST00000471423 HAND2P61296 217 aa21.07■□□□□ 0.96
VPS72-204ENST00000471423 ICA1Q05084 483 aa21.07■□□□□ 0.96
VPS72-204ENST00000471423 ZYXQ15942 572 aaKnown RBP21.07■□□□□ 0.96
VPS72-204ENST00000471423 SH3D19Q5HYK7 790 aa21.07■□□□□ 0.96
VPS72-204ENST00000471423 TREML2Q5T2D2 321 aa21.07■□□□□ 0.96
VPS72-204ENST00000471423 PROCA1Q8NCQ7 364 aaPredicted RBP21.07■□□□□ 0.96
VPS72-204ENST00000471423 ACER1Q8TDN7 264 aa21.07■□□□□ 0.96
VPS72-204ENST00000471423 ZCCHC17Q9NP64 241 aaKnown RBP21.07■□□□□ 0.96
VPS72-204ENST00000471423 TACC3Q9Y6A5 838 aa21.07■□□□□ 0.96
VPS72-204ENST00000471423 INCENPQ9NQS7 918 aa21.06■□□□□ 0.96
VPS72-204ENST00000471423 AGTPBP1Q9UPW5 1226 aa21.06■□□□□ 0.96
VPS72-204ENST00000471423 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.06■□□□□ 0.96
VPS72-204ENST00000471423 C19orf81C9J6K1 198 aa21.05■□□□□ 0.96
VPS72-204ENST00000471423 ZNF444Q8N0Y2 327 aaPredicted RBP21.05■□□□□ 0.96
VPS72-204ENST00000471423 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.05■□□□□ 0.96
VPS72-204ENST00000471423 NBPF3Q9H094 633 aa21.05■□□□□ 0.96
VPS72-204ENST00000471423 ZFYVE28Q9HCC9 887 aa21.05■□□□□ 0.96
VPS72-204ENST00000471423 PRDM10Q9NQV6 1147 aa21.05■□□□□ 0.96
VPS72-204ENST00000471423 TMOD4Q9NZQ9 345 aa21.05■□□□□ 0.96
VPS72-204ENST00000471423 A0A1W2PRG0 241 aa21.04■□□□□ 0.96
VPS72-204ENST00000471423 FAM47AQ5JRC9 791 aa21.04■□□□□ 0.96
VPS72-204ENST00000471423 KIAA1683Q9H0B3 1180 aa21.04■□□□□ 0.96
VPS72-204ENST00000471423 EMILIN3Q9NT22 766 aa21.04■□□□□ 0.96
VPS72-204ENST00000471423 PLIN4Q96Q06 1357 aa21.03■□□□□ 0.96
VPS72-204ENST00000471423 CDC45O75419 566 aa21.03■□□□□ 0.96
VPS72-204ENST00000471423 CYP2C8P10632 490 aa21.03■□□□□ 0.96
VPS72-204ENST00000471423 USP14P54578 494 aa21.03■□□□□ 0.96
VPS72-204ENST00000471423 PTH1RQ03431 593 aa21.03■□□□□ 0.96
VPS72-204ENST00000471423 USP17L2Q6R6M4 530 aa21.03■□□□□ 0.96
VPS72-204ENST00000471423 TBC1D10CQ8IV04 446 aa21.03■□□□□ 0.96
VPS72-204ENST00000471423 PARK7Q99497 189 aaKnown RBP21.03■□□□□ 0.96
VPS72-204ENST00000471423 ESYT1Q9BSJ8 1104 aa21.03■□□□□ 0.96
VPS72-204ENST00000471423 KANSL2Q9H9L4 492 aa21.03■□□□□ 0.96
VPS72-204ENST00000471423 ARHGEF10LQ9HCE6 1279 aa21.03■□□□□ 0.96
VPS72-204ENST00000471423 TOMM22Q9NS69 142 aa21.03■□□□□ 0.96
VPS72-204ENST00000471423 SLC45A1Q9Y2W3 748 aa21.03■□□□□ 0.96
VPS72-204ENST00000471423 GPR25O00155 361 aa21.02■□□□□ 0.96
VPS72-204ENST00000471423 ZNF213O14771 459 aa21.02■□□□□ 0.96
VPS72-204ENST00000471423 ORC4O43929 436 aa21.02■□□□□ 0.96
VPS72-204ENST00000471423 FGRP09769 529 aa21.02■□□□□ 0.96
VPS72-204ENST00000471423 TSPY3P0CV98 308 aa21.02■□□□□ 0.96
VPS72-204ENST00000471423 TSPY8P0CW00 308 aa21.02■□□□□ 0.96
VPS72-204ENST00000471423 EEF2P13639 858 aaKnown RBP21.02■□□□□ 0.96
VPS72-204ENST00000471423 ATP2B2Q01814 1243 aa21.02■□□□□ 0.96
VPS72-204ENST00000471423 SIAH1Q8IUQ4 282 aa21.02■□□□□ 0.96
VPS72-204ENST00000471423 ZNF296Q8WUU4 475 aaPredicted RBP21.02■□□□□ 0.96
VPS72-204ENST00000471423 STAG1Q8WVM7 1258 aa21.02■□□□□ 0.96
VPS72-204ENST00000471423 C12orf42Q96LP6 360 aa21.02■□□□□ 0.96
VPS72-204ENST00000471423 CTNNA3Q9UI47 895 aa21.02■□□□□ 0.96
VPS72-204ENST00000471423 CASP8AP2Q9UKL3 1982 aa21.01■□□□□ 0.95
VPS72-204ENST00000471423 IGKV6D-41A0A0C4DH26 115 aa21.01■□□□□ 0.95
VPS72-204ENST00000471423 TLR2O60603 784 aa21.01■□□□□ 0.95
VPS72-204ENST00000471423 TFAP4Q01664 338 aa21.01■□□□□ 0.95
VPS72-204ENST00000471423 IMMTQ16891 758 aaKnown RBP21.01■□□□□ 0.95
VPS72-204ENST00000471423 NOM1Q5C9Z4 860 aaKnown RBP21.01■□□□□ 0.95
VPS72-204ENST00000471423 RRP12Q5JTH9 1297 aaKnown RBP21.01■□□□□ 0.95
VPS72-204ENST00000471423 AKNAD1Q5T1N1 836 aa21.01■□□□□ 0.95
VPS72-204ENST00000471423 CASC1Q6TDU7 716 aa21.01■□□□□ 0.95
VPS72-204ENST00000471423 NEDD1Q8NHV4 660 aa21.01■□□□□ 0.95
VPS72-204ENST00000471423 SH2D4AQ9H788 454 aa21.01■□□□□ 0.95
VPS72-204ENST00000471423 NEDD4P46934 1319 aa21.01■□□□□ 0.95
VPS72-204ENST00000471423 ADGRA2Q96PE1 1338 aa21.01■□□□□ 0.95
VPS72-204ENST00000471423 TSPY2A6NKD2 308 aa21■□□□□ 0.95
VPS72-204ENST00000471423 RANBP6O60518 1105 aaKnown RBP21■□□□□ 0.95
VPS72-204ENST00000471423 VCAM1P19320 739 aa21■□□□□ 0.95
VPS72-204ENST00000471423 PABPC4Q13310 644 aaKnown RBP eCLIP21■□□□□ 0.95
VPS72-204ENST00000471423 MFSD6Q6ZSS7 791 aa21■□□□□ 0.95
VPS72-204ENST00000471423 CEP95Q96GE4 821 aa21■□□□□ 0.95
VPS72-204ENST00000471423 RNF41Q9H4P4 317 aaPredicted RBP21■□□□□ 0.95
VPS72-204ENST00000471423 PNMA3Q9UL41 463 aa21■□□□□ 0.95
VPS72-204ENST00000471423 TMX2Q9Y320 296 aa21■□□□□ 0.95
VPS72-204ENST00000471423 FKTNO75072 461 aa20.99■□□□□ 0.95
VPS72-204ENST00000471423 SMCR8Q8TEV9 937 aaPredicted RBP20.99■□□□□ 0.95
VPS72-204ENST00000471423 ASCC2Q9H1I8 757 aaPredicted RBP20.99■□□□□ 0.95
VPS72-204ENST00000471423 CPA4Q9UI42 421 aa20.99■□□□□ 0.95
VPS72-204ENST00000471423 U3KPZ7 1027 aaPredicted RBP20.99■□□□□ 0.95
VPS72-204ENST00000471423 PCP11498 1178 aaKnown RBP20.98■□□□□ 0.95
VPS72-204ENST00000471423 IRX3P78415 501 aaPredicted RBP20.98■□□□□ 0.95
VPS72-204ENST00000471423 KIAA1755Q5JYT7 1200 aa20.98■□□□□ 0.95
VPS72-204ENST00000471423 COL13A1Q5TAT6 717 aaPredicted RBP20.98■□□□□ 0.95
VPS72-204ENST00000471423 KIAA1211Q6ZU35 1233 aa20.98■□□□□ 0.95
VPS72-204ENST00000471423 MAP4K1Q92918 833 aa20.98■□□□□ 0.95
VPS72-204ENST00000471423 LSG1Q9H089 658 aaKnown RBP20.98■□□□□ 0.95
VPS72-204ENST00000471423 VCPKMTQ9H867 229 aa20.98■□□□□ 0.95
VPS72-204ENST00000471423 MTMR4Q9NYA4 1195 aa20.98■□□□□ 0.95
VPS72-204ENST00000471423 NYAP2Q9P242 653 aa20.98■□□□□ 0.95
VPS72-204ENST00000471423 NMT2O60551 498 aa20.97■□□□□ 0.95
VPS72-204ENST00000471423 OSBPP22059 807 aa20.97■□□□□ 0.95
VPS72-204ENST00000471423 HOXA7P31268 230 aaPredicted RBP20.97■□□□□ 0.95
VPS72-204ENST00000471423 C17orf99Q6UX52 265 aa20.97■□□□□ 0.95
VPS72-204ENST00000471423 SPICE1Q8N0Z3 855 aa20.97■□□□□ 0.95
VPS72-204ENST00000471423 NKX2-3Q8TAU0 364 aa20.97■□□□□ 0.95
VPS72-204ENST00000471423 RPAP3Q9H6T3 665 aaPredicted RBP20.97■□□□□ 0.95
VPS72-204ENST00000471423 ANO2Q9NQ90 1003 aa20.97■□□□□ 0.95
VPS72-204ENST00000471423 CLIP2Q9UDT6 1046 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms