RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.35□□□□□ -1.23
SMNDC1-204ENST00000471297 TAF1LQ8IZX4 1826 aa7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 NPHP1O15259 732 aa7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 PDE8BO95263 885 aa7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 ATP2B4P23634 1241 aa7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 TM4SF1P30408 202 aa7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 BECN1Q14457 450 aa7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 NFIXQ14938 502 aa7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 LRRFIP1Q32MZ4 808 aaKnown RBP7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 GORABQ5T7V8 394 aa7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 RIPOR1Q6ZS17 1223 aa7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 SMIM5Q71RC9 77 aa7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 AMIGO3Q86WK7 504 aa7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 ANKRD18AQ8IVF6 992 aa7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 LPIN2Q92539 896 aa7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 VTI1AQ96AJ9 217 aa7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 ZNF512BQ96KM6 892 aaPredicted RBP7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 DIAPH3Q9NSV4 1193 aa7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 BSDC1Q9NW68 430 aaPredicted RBP7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 TLR7Q9NYK1 1049 aaKnown RBP7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 CXXC1Q9P0U4 656 aaPredicted RBP7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 SCN7AQ01118 1682 aa7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 ZNF609O15014 1411 aa7.34□□□□□ -1.23
SMNDC1-204ENST00000471297 CARMIL3Q8ND23 1372 aa7.33□□□□□ -1.24
SMNDC1-204ENST00000471297 ABCC12Q96J65 1359 aa7.33□□□□□ -1.24
SMNDC1-204ENST00000471297 MAP4K4O95819 1239 aaPredicted RBP7.33□□□□□ -1.24
SMNDC1-204ENST00000471297 IFIT1P09914 478 aaKnown RBP7.33□□□□□ -1.24
SMNDC1-204ENST00000471297 UQCRFS1P1P0C7P4 283 aa7.33□□□□□ -1.24
SMNDC1-204ENST00000471297 GYS1P13807 737 aa7.33□□□□□ -1.24
SMNDC1-204ENST00000471297 SLC5A1P13866 664 aa7.33□□□□□ -1.24
SMNDC1-204ENST00000471297 MCCP23508 829 aa7.33□□□□□ -1.24
SMNDC1-204ENST00000471297 PUM3Q15397 648 aaKnown RBP7.33□□□□□ -1.24
SMNDC1-204ENST00000471297 ATP2B3Q16720 1220 aa7.33□□□□□ -1.24
SMNDC1-204ENST00000471297 TTC39AQ5SRH9 613 aa7.33□□□□□ -1.24
SMNDC1-204ENST00000471297 KIAA1211Q6ZU35 1233 aa7.33□□□□□ -1.24
SMNDC1-204ENST00000471297 NLGN1Q8N2Q7 840 aa7.33□□□□□ -1.24
SMNDC1-204ENST00000471297 VGLL2Q8N8G2 317 aa7.33□□□□□ -1.24
SMNDC1-204ENST00000471297 GPAMQ9HCL2 828 aa7.33□□□□□ -1.24
SMNDC1-204ENST00000471297 SEC31BQ9NQW1 1179 aa7.33□□□□□ -1.24
SMNDC1-204ENST00000471297 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.33□□□□□ -1.24
SMNDC1-204ENST00000471297 ZDHHC3Q9NYG2 299 aa7.33□□□□□ -1.24
SMNDC1-204ENST00000471297 TFCP2L1Q9NZI6 479 aa7.33□□□□□ -1.24
SMNDC1-204ENST00000471297 RFX7Q2KHR2 1363 aa7.33□□□□□ -1.24
SMNDC1-204ENST00000471297 RAD50Q92878 1312 aa7.32□□□□□ -1.24
SMNDC1-204ENST00000471297 SGSM2O43147 1006 aa7.32□□□□□ -1.24
SMNDC1-204ENST00000471297 SERPINB2P05120 415 aa7.32□□□□□ -1.24
SMNDC1-204ENST00000471297 FGFR2P21802 821 aa7.32□□□□□ -1.24
SMNDC1-204ENST00000471297 VEGFBP49765 207 aa7.32□□□□□ -1.24
SMNDC1-204ENST00000471297 HIRAP54198 1017 aaPredicted RBP7.32□□□□□ -1.24
SMNDC1-204ENST00000471297 RPS8P62241 208 aaKnown RBP7.32□□□□□ -1.24
SMNDC1-204ENST00000471297 ST5P78524 1137 aa7.32□□□□□ -1.24
SMNDC1-204ENST00000471297 SF3B2Q13435 895 aaKnown RBP7.32□□□□□ -1.24
SMNDC1-204ENST00000471297 DDX46Q7L014 1031 aaKnown RBP7.32□□□□□ -1.24
SMNDC1-204ENST00000471297 ALDH16A1Q8IZ83 802 aa7.32□□□□□ -1.24
SMNDC1-204ENST00000471297 CNBD1Q8NA66 436 aa7.32□□□□□ -1.24
SMNDC1-204ENST00000471297 C1orf216Q8TAB5 229 aa7.32□□□□□ -1.24
SMNDC1-204ENST00000471297 CAMKK2Q96RR4 588 aa7.32□□□□□ -1.24
SMNDC1-204ENST00000471297 FSD1Q9BTV5 496 aa7.32□□□□□ -1.24
SMNDC1-204ENST00000471297 PHACTR1Q9C0D0 580 aa7.32□□□□□ -1.24
SMNDC1-204ENST00000471297 MYH3P11055 1940 aa7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 TERTO14746 1132 aaKnown RBP7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 ANAPC15P60006 121 aa7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 CHRNDQ07001 517 aa7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 UBE4AQ14139 1066 aa7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 RABEP1Q15276 862 aa7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 TTF1Q15361 905 aaPredicted RBP7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 DBN1Q16643 649 aa7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 ZNF827Q17R98 1081 aa7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 RIC1Q4ADV7 1423 aa7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 ARSJQ5FYB0 599 aaPredicted RBP7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 C1orf53Q5VUE5 145 aa7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 CWC27Q6UX04 472 aaKnown RBP7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 COL23A1Q86Y22 540 aaPredicted RBP7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 NPAS3Q8IXF0 933 aa7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 PGBD3Q8N328 593 aa7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 KBTBD3Q8NAB2 608 aa7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 C7orf43Q8WVR3 580 aa7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 SNX21Q969T3 373 aa7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 ZIC5Q96T25 663 aa7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 DNAJC2Q99543 621 aaKnown RBP7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 ANKRD2Q9GZV1 360 aa7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 RUBCNLQ9H714 662 aa7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 ANO2Q9NQ90 1003 aa7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 CUEDC1Q9NWM3 386 aaPredicted RBP7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 PAG1Q9NWQ8 432 aa7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 LAMB2P55268 1798 aa7.31□□□□□ -1.24
SMNDC1-204ENST00000471297 COL24A1Q17RW2 1714 aa7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 DDX60Q8IY21 1712 aaKnown RBP7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 POLRMTO00411 1230 aaKnown RBP7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 ZFYP08048 801 aaPredicted RBP7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 ARID4AP29374 1257 aaPredicted RBP7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 ADORA1P30542 326 aa7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 BAG6P46379 1132 aa7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 GRAPQ13588 217 aa7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 PRR5LQ6MZQ0 368 aa7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 PHLDB3Q6NSJ2 640 aa7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 CAPN12Q6ZSI9 719 aa7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 VWA5B2Q8N398 1253 aa7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 GRAPLQ8TC17 118 aaPredicted RBP7.3□□□□□ -1.24
SMNDC1-204ENST00000471297 IL17RAQ96F46 866 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms