RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, human

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1-208	ENST00000471250	CTCFL	Q8NI51	663 aa	Predicted RBP	30.17	■■■□□ 2.42
U2AF1-208	ENST00000471250	AIFM3	Q96NN9	605 aa		30.17	■■■□□ 2.42
U2AF1-208	ENST00000471250	MYH15	Q9Y2K3	1946 aa		30.16	■■■□□ 2.42
U2AF1-208	ENST00000471250	RASSF7	Q02833	373 aa		30.16	■■■□□ 2.42
U2AF1-208	ENST00000471250	SH3BP5L	Q7L8J4	393 aa		30.16	■■■□□ 2.42
U2AF1-208	ENST00000471250	PNMA1	Q8ND90	353 aa		30.16	■■■□□ 2.42
U2AF1-208	ENST00000471250	RNF26	Q9BY78	433 aa	Predicted RBP	30.16	■■■□□ 2.42
U2AF1-208	ENST00000471250	COL2A1	P02458	1487 aa	Predicted RBP	30.16	■■■□□ 2.42
U2AF1-208	ENST00000471250	DDTL	A6NHG4	134 aa	Predicted RBP	30.15	■■■□□ 2.42
U2AF1-208	ENST00000471250	SHMT1	P34896	483 aa		30.15	■■■□□ 2.42
U2AF1-208	ENST00000471250	FUT2	Q10981	343 aa		30.15	■■■□□ 2.42
U2AF1-208	ENST00000471250	TMTC3	Q6ZXV5	915 aa		30.15	■■■□□ 2.42
U2AF1-208	ENST00000471250	TMEM47	Q9BQJ4	181 aa		30.15	■■■□□ 2.42
U2AF1-208	ENST00000471250	PI4KB	Q9UBF8	816 aa		30.15	■■■□□ 2.42
U2AF1-208	ENST00000471250	DEXI	O95424	95 aa		30.14	■■■□□ 2.42
U2AF1-208	ENST00000471250	CMTR1	Q8N1G2	835 aa	Known RBP	30.14	■■■□□ 2.42
U2AF1-208	ENST00000471250	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	30.14	■■■□□ 2.42
U2AF1-208	ENST00000471250	TMOD2	Q9NZR1	351 aa		30.14	■■■□□ 2.42
U2AF1-208	ENST00000471250	FIBP	O43427	364 aa		30.14	■■■□□ 2.41
U2AF1-208	ENST00000471250	GJB4	Q9NTQ9	266 aa		30.14	■■■□□ 2.41
U2AF1-208	ENST00000471250	ATRNL1	Q5VV63	1379 aa		30.13	■■■□□ 2.41
U2AF1-208	ENST00000471250	PLEKHA8P1	O95397	391 aa		30.13	■■■□□ 2.41
U2AF1-208	ENST00000471250	AKR1B1	P15121	316 aa		30.13	■■■□□ 2.41
U2AF1-208	ENST00000471250	MMP14	P50281	582 aa		30.13	■■■□□ 2.41
U2AF1-208	ENST00000471250	KRT40	Q6A162	431 aa		30.13	■■■□□ 2.41
U2AF1-208	ENST00000471250	CCDC82	Q8N4S0	544 aa		30.13	■■■□□ 2.41
U2AF1-208	ENST00000471250	GPT2	Q8TD30	523 aa		30.13	■■■□□ 2.41
U2AF1-208	ENST00000471250	ZNF70	Q9UC06	446 aa	Predicted RBP	30.13	■■■□□ 2.41
U2AF1-208	ENST00000471250	STX8	Q9UNK0	236 aa		30.13	■■■□□ 2.41
U2AF1-208	ENST00000471250	MYH6	P13533	1939 aa		30.12	■■■□□ 2.41
U2AF1-208	ENST00000471250	IGKV6D-41	A0A0C4DH26	115 aa		30.12	■■■□□ 2.41
U2AF1-208	ENST00000471250	PRPF3	O43395	683 aa	Known RBP	30.12	■■■□□ 2.41
U2AF1-208	ENST00000471250	KIF5B	P33176	963 aa		30.12	■■■□□ 2.41
U2AF1-208	ENST00000471250	GUCY1A2	P33402	732 aa		30.12	■■■□□ 2.41
U2AF1-208	ENST00000471250	PRELP	P51888	382 aa		30.12	■■■□□ 2.41
U2AF1-208	ENST00000471250	FOXP4	Q8IVH2	680 aa	Predicted RBP	30.12	■■■□□ 2.41
U2AF1-208	ENST00000471250	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	30.12	■■■□□ 2.41
U2AF1-208	ENST00000471250	CEP95	Q96GE4	821 aa		30.12	■■■□□ 2.41
U2AF1-208	ENST00000471250	UBE2Q2L	H0YL09	131 aa		30.11	■■■□□ 2.41
U2AF1-208	ENST00000471250	MBD3	O95983	291 aa		30.11	■■■□□ 2.41
U2AF1-208	ENST00000471250	GRM4	Q14833	912 aa		30.11	■■■□□ 2.41
U2AF1-208	ENST00000471250	ZBED3	Q96IU2	234 aa	Predicted RBP	30.11	■■■□□ 2.41
U2AF1-208	ENST00000471250	DNAJC18	Q9H819	358 aa		30.11	■■■□□ 2.41
U2AF1-208	ENST00000471250	TOP1	P11387	765 aa	Known RBP	30.11	■■■□□ 2.41
U2AF1-208	ENST00000471250	TRIM29	Q14134	588 aa		30.11	■■■□□ 2.41
U2AF1-208	ENST00000471250	SPDYE2	Q495Y8	402 aa		30.11	■■■□□ 2.41
U2AF1-208	ENST00000471250	METTL16	Q86W50	562 aa	Known RBP	30.11	■■■□□ 2.41
U2AF1-208	ENST00000471250	CCDC17	Q96LX7	622 aa		30.11	■■■□□ 2.41
U2AF1-208	ENST00000471250	SCAND2P	Q9GZW5	306 aa	Predicted RBP	30.11	■■■□□ 2.41
U2AF1-208	ENST00000471250	GREB1L	Q9C091	1923 aa	Predicted RBP	30.1	■■■□□ 2.41
U2AF1-208	ENST00000471250	FZD9	O00144	591 aa		30.1	■■■□□ 2.41
U2AF1-208	ENST00000471250	GADD45B	O75293	160 aa	Predicted RBP	30.1	■■■□□ 2.41
U2AF1-208	ENST00000471250	RPS12	P25398	132 aa	Known RBP	30.1	■■■□□ 2.41
U2AF1-208	ENST00000471250	AKAP17A	Q02040	695 aa	Known RBP	30.1	■■■□□ 2.41
U2AF1-208	ENST00000471250	KIF23	Q02241	960 aa	Predicted RBP	30.1	■■■□□ 2.41
U2AF1-208	ENST00000471250	GSE1	Q14687	1217 aa		30.1	■■■□□ 2.41
U2AF1-208	ENST00000471250	ATL3	Q6DD88	541 aa		30.1	■■■□□ 2.41
U2AF1-208	ENST00000471250	SRBD1	Q8N5C6	995 aa	Known RBP	30.1	■■■□□ 2.41
U2AF1-208	ENST00000471250	MTMR4	Q9NYA4	1195 aa		30.1	■■■□□ 2.41
U2AF1-208	ENST00000471250	TFIP11	Q9UBB9	837 aa	Known RBP	30.09	■■■□□ 2.41
U2AF1-208	ENST00000471250	CNTNAP5	Q8WYK1	1306 aa		30.09	■■■□□ 2.41
U2AF1-208	ENST00000471250	ELP1	O95163	1332 aa		30.08	■■■□□ 2.41
U2AF1-208	ENST00000471250	FKBP1C	Q5VVH2	108 aa		30.08	■■■□□ 2.41
U2AF1-208	ENST00000471250	BRAP	Q7Z569	592 aa		30.08	■■■□□ 2.41
U2AF1-208	ENST00000471250	CFAP45	Q9UL16	551 aa		30.08	■■■□□ 2.41
U2AF1-208	ENST00000471250	CLRN2	A0PK11	232 aa		30.07	■■■□□ 2.41
U2AF1-208	ENST00000471250	GNAQ	P50148	359 aa		30.07	■■■□□ 2.41
U2AF1-208	ENST00000471250	EIF6	P56537	245 aa	Known RBP	30.07	■■■□□ 2.41
U2AF1-208	ENST00000471250	PKN1	Q16512	942 aa		30.07	■■■□□ 2.41
U2AF1-208	ENST00000471250	FAM151A	Q8WW52	585 aa		30.07	■■■□□ 2.41
U2AF1-208	ENST00000471250	ZNF396	Q96N95	335 aa	Predicted RBP	30.07	■■■□□ 2.41
U2AF1-208	ENST00000471250	FHDC1	Q9C0D6	1143 aa	Predicted RBP	30.07	■■■□□ 2.41
U2AF1-208	ENST00000471250	GZF1	Q9H116	711 aa	Predicted RBP	30.07	■■■□□ 2.41
U2AF1-208	ENST00000471250	TCP10L2	B9ZVM9	353 aa		30.07	■■■□□ 2.4
U2AF1-208	ENST00000471250	ZNF280A	P59817	542 aa	Predicted RBP	30.07	■■■□□ 2.4
U2AF1-208	ENST00000471250	UBE2H	P62256	183 aa		30.07	■■■□□ 2.4
U2AF1-208	ENST00000471250	TATDN1	Q6P1N9	297 aa		30.07	■■■□□ 2.4
U2AF1-208	ENST00000471250	TRIM34	Q9BYJ4	488 aa		30.07	■■■□□ 2.4
U2AF1-208	ENST00000471250	MAD2L2	Q9UI95	211 aa		30.07	■■■□□ 2.4
U2AF1-208	ENST00000471250		V9GY48	417 aa	Predicted RBP	30.07	■■■□□ 2.4
U2AF1-208	ENST00000471250	SLURP2	P0DP57	97 aa		30.06	■■■□□ 2.4
U2AF1-208	ENST00000471250	MYOZ2	Q9NPC6	264 aa		30.06	■■■□□ 2.4
U2AF1-208	ENST00000471250	KIF28P	B7ZC32	967 aa		30.05	■■■□□ 2.4
U2AF1-208	ENST00000471250	LEO1	Q8WVC0	666 aa	Predicted RBP	30.05	■■■□□ 2.4
U2AF1-208	ENST00000471250	SPATA32	Q96LK8	384 aa		30.05	■■■□□ 2.4
U2AF1-208	ENST00000471250	PALM3	A6NDB9	673 aa	Predicted RBP	30.04	■■■□□ 2.4
U2AF1-208	ENST00000471250	PPP4R3B	Q5MIZ7	849 aa		30.04	■■■□□ 2.4
U2AF1-208	ENST00000471250	CNTNAP1	P78357	1384 aa		30.04	■■■□□ 2.4
U2AF1-208	ENST00000471250	MYO1B	O43795	1136 aa		30.04	■■■□□ 2.4
U2AF1-208	ENST00000471250	CERKL	Q49MI3	558 aa	Predicted RBP	30.04	■■■□□ 2.4
U2AF1-208	ENST00000471250	STAG2	Q8N3U4	1231 aa		30.04	■■■□□ 2.4
U2AF1-208	ENST00000471250	DPF2	Q92785	391 aa		30.04	■■■□□ 2.4
U2AF1-208	ENST00000471250	FAM196B	A6NMK8	535 aa		30.03	■■■□□ 2.4
U2AF1-208	ENST00000471250	WNT10B	O00744	389 aa		30.03	■■■□□ 2.4
U2AF1-208	ENST00000471250	TTLL1	O95922	423 aa		30.03	■■■□□ 2.4
U2AF1-208	ENST00000471250	MMP1	P03956	469 aa		30.03	■■■□□ 2.4
U2AF1-208	ENST00000471250	LZTS2	Q9BRK4	669 aa		30.03	■■■□□ 2.4
U2AF1-208	ENST00000471250	RBM27	Q9P2N5	1060 aa	Known RBP	30.03	■■■□□ 2.4
U2AF1-208	ENST00000471250	SHTN1	A0MZ66	631 aa		30.02	■■■□□ 2.4
U2AF1-208	ENST00000471250	XBP1	P17861	261 aa		30.02	■■■□□ 2.4

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms