RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 ONECUT3O60422 494 aaPredicted RBP4.75□□□□□ -1.65
VPS50-210ENST00000471188 PYGLP06737 847 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 FECHP22830 423 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 MATR3P43243 847 aaKnown RBP eCLIP4.75□□□□□ -1.65
VPS50-210ENST00000471188 SYKP43405 635 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 COPS2P61201 443 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 MRPS25P82663 173 aaKnown RBP4.75□□□□□ -1.65
VPS50-210ENST00000471188 GUCY1A3Q02108 690 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 SF3A3Q12874 501 aaKnown RBP eCLIP4.75□□□□□ -1.65
VPS50-210ENST00000471188 GNPTABQ3T906 1256 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 ACCSLQ4AC99 568 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 NAA35Q5VZE5 725 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 MSL1Q68DK7 614 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 OTUD7BQ6GQQ9 843 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 WDR93Q6P2C0 686 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 TRIM74Q86UV6 250 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 TRIM73Q86UV7 250 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 TRMT44Q8IYL2 757 aaKnown RBP4.75□□□□□ -1.65
VPS50-210ENST00000471188 CLASRPQ8N2M8 674 aaKnown RBP4.75□□□□□ -1.65
VPS50-210ENST00000471188 GPATCH3Q96I76 525 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 FSD1Q9BTV5 496 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.75□□□□□ -1.65
VPS50-210ENST00000471188 ATP6V0A4Q9HBG4 840 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 BIN2Q9UBW5 565 aaPredicted RBP4.75□□□□□ -1.65
VPS50-210ENST00000471188 ADGRG1Q9Y653 693 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 EMILIN1Q9Y6C2 1016 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 RIMS2Q9UQ26 1411 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 GRIN2DO15399 1336 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 AOX1Q06278 1338 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 PTPDC1A2A3K4 754 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 ANKRD33BA6NCL7 494 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 GOLGA8KD6RF30 607 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 SPTLC2O15270 562 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 HSF2BPO75031 334 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 SRGAP2O75044 1071 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 RASSF9O75901 435 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 USP14P54578 494 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 HDLBPQ00341 1268 aaKnown RBP4.75□□□□□ -1.65
VPS50-210ENST00000471188 PTGDRQ13258 359 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 NMIQ13287 307 aaPredicted RBP4.75□□□□□ -1.65
VPS50-210ENST00000471188 PNOCQ13519 176 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 PDCD2Q16342 344 aaPredicted RBP4.75□□□□□ -1.65
VPS50-210ENST00000471188 NUTM2GQ5VZR2 741 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 RCSD1Q6JBY9 416 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 RAD9BQ6WBX8 426 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 PNMA8AQ86V59 439 aaPredicted RBP4.75□□□□□ -1.65
VPS50-210ENST00000471188 FUKQ8N0W3 1084 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 ZNF473Q8WTR7 871 aaKnown RBP4.75□□□□□ -1.65
VPS50-210ENST00000471188 SPAG5Q96R06 1193 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 NFE2L3Q9Y4A8 694 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 UBR1Q8IWV7 1749 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 MINK1Q8N4C8 1332 aaPredicted RBP4.75□□□□□ -1.65
VPS50-210ENST00000471188 UGGT1Q9NYU2 1555 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 AGPSO00116 658 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 OPLAHO14841 1288 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 NBPF7P0C2Y1 421 aaPredicted RBP4.75□□□□□ -1.65
VPS50-210ENST00000471188 HPDP32754 393 aaPredicted RBP4.75□□□□□ -1.65
VPS50-210ENST00000471188 LSP1P33241 339 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 ADD1P35611 737 aaKnown RBP4.75□□□□□ -1.65
VPS50-210ENST00000471188 SLC8A3P57103 927 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 ICA1Q05084 483 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 PPP1R7Q15435 360 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 HIBCHQ6NVY1 386 aaPredicted RBP4.75□□□□□ -1.65
VPS50-210ENST00000471188 STK11IPQ8N1F8 1099 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 KLHL23Q8NBE8 558 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 ARL8AQ96BM9 186 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 NEK1Q96PY6 1258 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 NCOA5Q9HCD5 579 aaKnown RBP4.75□□□□□ -1.65
VPS50-210ENST00000471188 HDAC6Q9UBN7 1215 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 TSPYL4Q9UJ04 414 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 TSR3Q9UJK0 312 aaKnown RBP4.75□□□□□ -1.65
VPS50-210ENST00000471188 CLIC4Q9Y696 253 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 RPS6KL1Q9Y6S9 549 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 LRRC7Q96NW7 1537 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 DUOX2Q9NRD8 1548 aa4.75□□□□□ -1.65
VPS50-210ENST00000471188 ABL1P00519 1130 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 CLTAP09496 248 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 NEFHP12036 1026 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 PFKFB1P16118 471 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 USP4Q13107 963 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 LAMB3Q13751 1172 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 KLHL10Q6JEL2 608 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 SLC30A9Q6PML9 568 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 LAPTM4BQ86VI4 370 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 ARHGEF25Q86VW2 580 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 RASSF8Q8NHQ8 419 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 KCNG4Q8TDN1 519 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 TCP11Q8WWU5 503 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 RRP36Q96EU6 259 aaKnown RBP4.74□□□□□ -1.65
VPS50-210ENST00000471188 STAMBPL1Q96FJ0 436 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 XAGE2Q96GT9 111 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 CCT8L2Q96SF2 557 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 SLF1Q9BQI6 1058 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 FAM167BQ9BTA0 163 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 BATF3Q9NR55 127 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 INTS13Q9NVM9 706 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 SBNO2Q9Y2G9 1366 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 A6NNZ2 444 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 SMIM24O75264 130 aa4.74□□□□□ -1.65
VPS50-210ENST00000471188 UPP2O95045 317 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms