RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 ARHGEF25Q86VW2 580 aa8.17□□□□□ -1.1
GPNMB-208ENST00000470994 C2CD4AQ8NCU7 369 aaPredicted RBP8.17□□□□□ -1.1
GPNMB-208ENST00000470994 EDEM1Q92611 657 aa8.17□□□□□ -1.1
GPNMB-208ENST00000470994 EZH1Q92800 747 aaPredicted RBP8.17□□□□□ -1.1
GPNMB-208ENST00000470994 CLP1Q92989 425 aaKnown RBP8.17□□□□□ -1.1
GPNMB-208ENST00000470994 NXPE3Q969Y0 559 aa8.17□□□□□ -1.1
GPNMB-208ENST00000470994 HHIPQ96QV1 700 aa8.17□□□□□ -1.1
GPNMB-208ENST00000470994 CARD11Q9BXL7 1154 aa8.17□□□□□ -1.1
GPNMB-208ENST00000470994 NLRP2Q9NX02 1062 aa8.17□□□□□ -1.1
GPNMB-208ENST00000470994 BRD4O60885 1362 aaPredicted RBP8.17□□□□□ -1.1
GPNMB-208ENST00000470994 AATKQ6ZMQ8 1374 aa8.17□□□□□ -1.1
GPNMB-208ENST00000470994 PLCH1Q4KWH8 1693 aa8.17□□□□□ -1.1
GPNMB-208ENST00000470994 KCNQ2O43526 872 aa8.16□□□□□ -1.1
GPNMB-208ENST00000470994 TRPA1O75762 1119 aa8.16□□□□□ -1.1
GPNMB-208ENST00000470994 DRD2P14416 443 aa8.16□□□□□ -1.1
GPNMB-208ENST00000470994 USP6P35125 1406 aa8.16□□□□□ -1.1
GPNMB-208ENST00000470994 CRB1P82279 1406 aa8.16□□□□□ -1.1
GPNMB-208ENST00000470994 DNM1Q05193 864 aaKnown RBP8.16□□□□□ -1.1
GPNMB-208ENST00000470994 SOX4Q06945 474 aaPredicted RBP8.16□□□□□ -1.1
GPNMB-208ENST00000470994 NFXL1Q6ZNB6 911 aa8.16□□□□□ -1.1
GPNMB-208ENST00000470994 ATCAYQ86WG3 371 aa8.16□□□□□ -1.1
GPNMB-208ENST00000470994 MARCH10Q8NA82 808 aaPredicted RBP8.16□□□□□ -1.1
GPNMB-208ENST00000470994 PARD3Q8TEW0 1356 aa8.16□□□□□ -1.1
GPNMB-208ENST00000470994 PAK6Q9NQU5 681 aaPredicted RBP8.16□□□□□ -1.1
GPNMB-208ENST00000470994 NWD2Q9ULI1 1742 aa8.16□□□□□ -1.1
GPNMB-208ENST00000470994 CAMTA1Q9Y6Y1 1673 aa8.16□□□□□ -1.1
GPNMB-208ENST00000470994 BRWD3Q6RI45 1802 aa8.15□□□□□ -1.1
GPNMB-208ENST00000470994 TRPM3Q9HCF6 1732 aaPredicted RBP8.15□□□□□ -1.1
GPNMB-208ENST00000470994 DISP2A7MBM2 1401 aa8.15□□□□□ -1.1
GPNMB-208ENST00000470994 KTN1Q86UP2 1357 aaKnown RBP8.15□□□□□ -1.1
GPNMB-208ENST00000470994 WDR17Q8IZU2 1322 aa8.15□□□□□ -1.1
GPNMB-208ENST00000470994 HDGFL2Q7Z4V5 671 aaPredicted RBP8.15□□□□□ -1.1
GPNMB-208ENST00000470994 ASAP3Q8TDY4 903 aa8.15□□□□□ -1.1
GPNMB-208ENST00000470994 ACSBG1Q96GR2 724 aa8.15□□□□□ -1.1
GPNMB-208ENST00000470994 ZKSCAN3Q9BRR0 538 aa8.15□□□□□ -1.1
GPNMB-208ENST00000470994 ZFYVE1Q9HBF4 777 aa8.15□□□□□ -1.1
GPNMB-208ENST00000470994 ALS2Q96Q42 1657 aa8.14□□□□□ -1.11
GPNMB-208ENST00000470994 TTC21AQ8NDW8 1320 aa8.14□□□□□ -1.11
GPNMB-208ENST00000470994 FAM170BA6NMN3 283 aa8.14□□□□□ -1.11
GPNMB-208ENST00000470994 PLSCR1O15162 318 aa8.14□□□□□ -1.11
GPNMB-208ENST00000470994 ATG7O95352 703 aa8.14□□□□□ -1.11
GPNMB-208ENST00000470994 ZBTB7AO95365 584 aa8.14□□□□□ -1.11
GPNMB-208ENST00000470994 YY1P25490 414 aa8.14□□□□□ -1.11
GPNMB-208ENST00000470994 ADMP35318 185 aa8.14□□□□□ -1.11
GPNMB-208ENST00000470994 GSTM4Q03013 218 aa8.14□□□□□ -1.11
GPNMB-208ENST00000470994 TMEM164Q5U3C3 297 aa8.14□□□□□ -1.11
GPNMB-208ENST00000470994 NME9Q86XW9 330 aa8.14□□□□□ -1.11
GPNMB-208ENST00000470994 STK11IPQ8N1F8 1099 aa8.14□□□□□ -1.11
GPNMB-208ENST00000470994 LTV1Q96GA3 475 aaPredicted RBP8.14□□□□□ -1.11
GPNMB-208ENST00000470994 CHRDQ9H2X0 955 aa8.14□□□□□ -1.11
GPNMB-208ENST00000470994 SLC12A5Q9H2X9 1139 aa8.14□□□□□ -1.11
GPNMB-208ENST00000470994 LRRC4CQ9HCJ2 640 aa8.14□□□□□ -1.11
GPNMB-208ENST00000470994 STK32BQ9NY57 414 aa8.14□□□□□ -1.11
GPNMB-208ENST00000470994 SLC5A6Q9Y289 635 aa8.14□□□□□ -1.11
GPNMB-208ENST00000470994 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.14□□□□□ -1.11
GPNMB-208ENST00000470994 COL5A2P05997 1499 aaPredicted RBP8.13□□□□□ -1.11
GPNMB-208ENST00000470994 PHACTR2O75167 634 aa8.13□□□□□ -1.11
GPNMB-208ENST00000470994 PDGFAP04085 211 aa8.13□□□□□ -1.11
GPNMB-208ENST00000470994 ESRRAP11474 423 aaPredicted RBP8.13□□□□□ -1.11
GPNMB-208ENST00000470994 ADH5P11766 374 aa8.13□□□□□ -1.11
GPNMB-208ENST00000470994 MZF1P28698 734 aaPredicted RBP8.13□□□□□ -1.11
GPNMB-208ENST00000470994 TXNRD1Q16881 649 aa8.13□□□□□ -1.11
GPNMB-208ENST00000470994 NOM1Q5C9Z4 860 aaKnown RBP8.13□□□□□ -1.11
GPNMB-208ENST00000470994 HELQQ8TDG4 1101 aa8.13□□□□□ -1.11
GPNMB-208ENST00000470994 KRTAP4-9Q9BYQ8 210 aa8.13□□□□□ -1.11
GPNMB-208ENST00000470994 BHLHE41Q9C0J9 482 aaPredicted RBP8.13□□□□□ -1.11
GPNMB-208ENST00000470994 OVOS2A0A0G2JMS6 1433 aa8.12□□□□□ -1.11
GPNMB-208ENST00000470994 OVOS2A0A0J9YW53 1432 aa8.12□□□□□ -1.11
GPNMB-208ENST00000470994 OVOS2Q6IE36 1432 aa8.12□□□□□ -1.11
GPNMB-208ENST00000470994 NRAPQ86VF7 1730 aa8.12□□□□□ -1.11
GPNMB-208ENST00000470994 DLGAP3O95886 979 aa8.12□□□□□ -1.11
GPNMB-208ENST00000470994 PLCL1Q15111 1095 aa8.12□□□□□ -1.11
GPNMB-208ENST00000470994 PKN1Q16512 942 aa8.12□□□□□ -1.11
GPNMB-208ENST00000470994 SHISA5Q8N114 240 aa8.12□□□□□ -1.11
GPNMB-208ENST00000470994 DDX54Q8TDD1 881 aaKnown RBP8.12□□□□□ -1.11
GPNMB-208ENST00000470994 SNX29Q8TEQ0 813 aa8.12□□□□□ -1.11
GPNMB-208ENST00000470994 TERF2IPQ9NYB0 399 aa8.12□□□□□ -1.11
GPNMB-208ENST00000470994 ZC3H7BQ9UGR2 993 aaKnown RBP8.12□□□□□ -1.11
GPNMB-208ENST00000470994 ABCA3Q99758 1704 aa8.12□□□□□ -1.11
GPNMB-208ENST00000470994 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.11□□□□□ -1.11
GPNMB-208ENST00000470994 IL2RBP14784 551 aa8.11□□□□□ -1.11
GPNMB-208ENST00000470994 RAB6AP20340 208 aa8.11□□□□□ -1.11
GPNMB-208ENST00000470994 ATP2B4P23634 1241 aa8.11□□□□□ -1.11
GPNMB-208ENST00000470994 COL19A1Q14993 1142 aa8.11□□□□□ -1.11
GPNMB-208ENST00000470994 ALKBH2Q6NS38 261 aa8.11□□□□□ -1.11
GPNMB-208ENST00000470994 ANKRD24Q8TF21 1146 aa8.11□□□□□ -1.11
GPNMB-208ENST00000470994 PDGFDQ9GZP0 370 aaPredicted RBP8.11□□□□□ -1.11
GPNMB-208ENST00000470994 GGNBP2Q9H3C7 697 aa8.11□□□□□ -1.11
GPNMB-208ENST00000470994 ARHGEF28Q8N1W1 1705 aaKnown RBP8.11□□□□□ -1.11
GPNMB-208ENST00000470994 THSD7AQ9UPZ6 1657 aa8.11□□□□□ -1.11
GPNMB-208ENST00000470994 TONSLQ96HA7 1378 aa8.1□□□□□ -1.11
GPNMB-208ENST00000470994 PAPLNO95428 1278 aa8.1□□□□□ -1.11
GPNMB-208ENST00000470994 AMPHP49418 695 aa8.1□□□□□ -1.11
GPNMB-208ENST00000470994 EHHADHQ08426 723 aa8.1□□□□□ -1.11
GPNMB-208ENST00000470994 SLC15A2Q16348 729 aa8.1□□□□□ -1.11
GPNMB-208ENST00000470994 ZNF765Q7L2R6 523 aa8.1□□□□□ -1.11
GPNMB-208ENST00000470994 GATA6Q92908 595 aa8.1□□□□□ -1.11
GPNMB-208ENST00000470994 SEPT3Q9UH03 358 aa8.1□□□□□ -1.11
GPNMB-208ENST00000470994 ACTL7BQ9Y614 415 aa8.1□□□□□ -1.11
GPNMB-208ENST00000470994 CPSF1Q10570 1443 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms