RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 ZNF569Q5MCW4 686 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 SPATA1Q5VX52 437 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 RAD9BQ6WBX8 426 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 IGSF22Q8N9C0 903 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 AIFM3Q96NN9 605 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 TEX13AQ9BXU3 409 aaPredicted RBP12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 IRX2Q9BZI1 471 aaPredicted RBP12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 ZSWIM4Q9H7M6 989 aa12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 CWC25Q9NXE8 425 aaPredicted RBP12.82□□□□□ -0.36
SRGAP3-204ENST00000470951 MYO5AQ9Y4I1 1855 aaKnown RBP12.81□□□□□ -0.36
SRGAP3-204ENST00000470951 PHLPP1O60346 1717 aa12.81□□□□□ -0.36
SRGAP3-204ENST00000470951 SOS2Q07890 1332 aaPredicted RBP12.81□□□□□ -0.36
SRGAP3-204ENST00000470951 SAFBQ15424 915 aaKnown RBP eCLIP12.81□□□□□ -0.36
SRGAP3-204ENST00000470951 NTRK3Q16288 839 aa12.81□□□□□ -0.36
SRGAP3-204ENST00000470951 TTC31Q49AM3 519 aaPredicted RBP12.81□□□□□ -0.36
SRGAP3-204ENST00000470951 APTXQ7Z2E3 356 aaKnown RBP12.81□□□□□ -0.36
SRGAP3-204ENST00000470951 SGMS1Q86VZ5 419 aa12.81□□□□□ -0.36
SRGAP3-204ENST00000470951 TMTC1Q8IUR5 882 aa12.81□□□□□ -0.36
SRGAP3-204ENST00000470951 STK11IPQ8N1F8 1099 aa12.81□□□□□ -0.36
SRGAP3-204ENST00000470951 FBXO41Q8TF61 875 aa12.81□□□□□ -0.36
SRGAP3-204ENST00000470951 SAMSN1Q9NSI8 373 aaKnown RBP12.81□□□□□ -0.36
SRGAP3-204ENST00000470951 FBXO2Q9UK22 296 aaPredicted RBP12.81□□□□□ -0.36
SRGAP3-204ENST00000470951 CEP131Q9UPN4 1083 aa12.81□□□□□ -0.36
SRGAP3-204ENST00000470951 TBC1D2BQ9UPU7 963 aa12.81□□□□□ -0.36
SRGAP3-204ENST00000470951 ATRNO75882 1429 aa12.81□□□□□ -0.36
SRGAP3-204ENST00000470951 RGPD5Q99666 1765 aa12.81□□□□□ -0.36
SRGAP3-204ENST00000470951 FOXN1O15353 648 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 ZBTB43O43298 467 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 AARSP49588 968 aaKnown RBP eCLIP12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 CORO7P57737 925 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 RBL2Q08999 1139 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 RAPGEF4Q8WZA2 1011 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 CEP89Q96ST8 783 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 FAM107BQ9H098 131 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 KDM4CQ9H3R0 1056 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 ADD3Q9UEY8 706 aaKnown RBP12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 SERTAD1Q9UHV2 236 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 WWC3Q9ULE0 1092 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 CCDC196A0A1B0GTZ2 297 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 POLR2DO15514 142 aaKnown RBP12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 GPAA1O43292 621 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 PPFIA4O75335 1185 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 ZMYND10O75800 440 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 PHKG2P15735 406 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 VSNL1P62760 191 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 MAP9Q49MG5 647 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 HSP90AA4PQ58FG1 418 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 CDKAL1Q5VV42 579 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 RAB11FIP4Q86YS3 637 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 TBC1D22AQ8WUA7 517 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 CALR3Q96L12 384 aaKnown RBP12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 FAM210AQ96ND0 272 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 MED15Q96RN5 788 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 FOXP1Q9H334 677 aaPredicted RBP12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 NID2Q14112 1375 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 UBN2Q6ZU65 1347 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 CHD4Q14839 1912 aa12.8□□□□□ -0.36
SRGAP3-204ENST00000470951 EIF3CLB5ME19 914 aaKnown RBP12.79□□□□□ -0.36
SRGAP3-204ENST00000470951 SSRP1Q08945 709 aaKnown RBP12.79□□□□□ -0.36
SRGAP3-204ENST00000470951 TRIM14Q14142 442 aa12.79□□□□□ -0.36
SRGAP3-204ENST00000470951 LRRC24Q50LG9 513 aa12.79□□□□□ -0.36
SRGAP3-204ENST00000470951 SLC9C2Q5TAH2 1124 aa12.79□□□□□ -0.36
SRGAP3-204ENST00000470951 MCTP2Q6DN12 878 aa12.79□□□□□ -0.36
SRGAP3-204ENST00000470951 TRMT44Q8IYL2 757 aaKnown RBP12.79□□□□□ -0.36
SRGAP3-204ENST00000470951 CCDC102AQ96A19 550 aa12.79□□□□□ -0.36
SRGAP3-204ENST00000470951 EIF3CQ99613 913 aaKnown RBP12.79□□□□□ -0.36
SRGAP3-204ENST00000470951 IGSF5Q9NSI5 407 aa12.79□□□□□ -0.36
SRGAP3-204ENST00000470951 SRPRBQ9Y5M8 271 aaKnown RBP12.79□□□□□ -0.36
SRGAP3-204ENST00000470951 AHDC1Q5TGY3 1603 aaPredicted RBP12.79□□□□□ -0.36
SRGAP3-204ENST00000470951 ACTN4O43707 911 aaKnown RBP12.79□□□□□ -0.36
SRGAP3-204ENST00000470951 MMP1P03956 469 aa12.79□□□□□ -0.36
SRGAP3-204ENST00000470951 LIFRP42702 1097 aa12.79□□□□□ -0.36
SRGAP3-204ENST00000470951 LRRC31Q6UY01 552 aa12.79□□□□□ -0.36
SRGAP3-204ENST00000470951 SLC35F6Q8N357 371 aa12.79□□□□□ -0.36
SRGAP3-204ENST00000470951 PUS7LQ9H0K6 701 aaKnown RBP12.79□□□□□ -0.36
SRGAP3-204ENST00000470951 GOLGA8AA7E2F4 631 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 TEX33O43247 280 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 N4BP1O75113 896 aaKnown RBP12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 FMNL1O95466 1100 aaPredicted RBP12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 CPP00450 1065 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 EFCAB13Q8IY85 973 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 IFNL2Q8IZJ0 200 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 CCDC148Q8NFR7 591 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 CABLES1Q8TDN4 633 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 PHKBQ93100 1093 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 DCAF5Q96JK2 942 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 NBPF3Q9H094 633 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 SPATA31A3Q5VYP0 1347 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 SYNRGQ9UMZ2 1314 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 TRPM3Q9HCF6 1732 aaPredicted RBP12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 COL16A1Q07092 1604 aaPredicted RBP12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 AKAP11Q9UKA4 1901 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 RANBP6O60518 1105 aaKnown RBP12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 RHOXF2BP0C7M4 288 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 IFNAR1P17181 557 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 TATP17735 454 aaPredicted RBP12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 AMPD2Q01433 879 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 CUL4BQ13620 913 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 SART3Q15020 963 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms