RNA–Protein interactions for RNA: ENST00000470771.1

ABCA4-204, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-204ENST00000470771 SGPL1O95470 568 aa16.49■□□□□ 0.23
ABCA4-204ENST00000470771 ZYXQ15942 572 aaKnown RBP16.49■□□□□ 0.23
ABCA4-204ENST00000470771 SHROOM1Q2M3G4 852 aaPredicted RBP16.49■□□□□ 0.23
ABCA4-204ENST00000470771 SDR42E1Q8WUS8 393 aa16.49■□□□□ 0.23
ABCA4-204ENST00000470771 DPF3Q92784 378 aa16.49■□□□□ 0.23
ABCA4-204ENST00000470771 NUDT12Q9BQG2 462 aa16.49■□□□□ 0.23
ABCA4-204ENST00000470771 UNC93B1Q9H1C4 597 aa16.49■□□□□ 0.23
ABCA4-204ENST00000470771 RBPJLQ9UBG7 517 aa16.49■□□□□ 0.23
ABCA4-204ENST00000470771 ZSWIM8A7E2V4 1837 aa16.49■□□□□ 0.23
ABCA4-204ENST00000470771 FOCADQ5VW36 1801 aa16.49■□□□□ 0.23
ABCA4-204ENST00000470771 ATAD5Q96QE3 1844 aa16.49■□□□□ 0.23
ABCA4-204ENST00000470771 SMARCA5O60264 1052 aaPredicted RBP16.48■□□□□ 0.23
ABCA4-204ENST00000470771 HMGCRP04035 888 aa16.48■□□□□ 0.23
ABCA4-204ENST00000470771 XRCC5P13010 732 aaKnown RBP16.48■□□□□ 0.23
ABCA4-204ENST00000470771 ERVK-9P63128 1117 aa16.48■□□□□ 0.23
ABCA4-204ENST00000470771 ERVK-24P63145 666 aa16.48■□□□□ 0.23
ABCA4-204ENST00000470771 GABPAQ06546 454 aa16.48■□□□□ 0.23
ABCA4-204ENST00000470771 TMEM179Q6ZVK1 233 aa16.48■□□□□ 0.23
ABCA4-204ENST00000470771 CCDC17Q96LX7 622 aa16.48■□□□□ 0.23
ABCA4-204ENST00000470771 PAGR1Q9BTK6 254 aa16.48■□□□□ 0.23
ABCA4-204ENST00000470771 SH2D4AQ9H788 454 aa16.48■□□□□ 0.23
ABCA4-204ENST00000470771 HOXC10Q9NYD6 342 aa16.48■□□□□ 0.23
ABCA4-204ENST00000470771 ZBTB47Q9UFB7 747 aaPredicted RBP16.48■□□□□ 0.23
ABCA4-204ENST00000470771 GJD2Q9UKL4 321 aa16.48■□□□□ 0.23
ABCA4-204ENST00000470771 RABGAP1Q9Y3P9 1069 aa16.48■□□□□ 0.23
ABCA4-204ENST00000470771 MYH1P12882 1939 aa16.48■□□□□ 0.23
ABCA4-204ENST00000470771 LOC285556D6RIA3 1793 aa16.47■□□□□ 0.23
ABCA4-204ENST00000470771 SEPT2Q15019 361 aa16.47■□□□□ 0.23
ABCA4-204ENST00000470771 CATSPERGQ6ZRH7 1159 aa16.47■□□□□ 0.23
ABCA4-204ENST00000470771 ACER1Q8TDN7 264 aa16.47■□□□□ 0.23
ABCA4-204ENST00000470771 DEFB118Q96PH6 123 aa16.47■□□□□ 0.23
ABCA4-204ENST00000470771 HMX1Q9NP08 348 aaPredicted RBP16.47■□□□□ 0.23
ABCA4-204ENST00000470771 SLC4A4Q9Y6R1 1079 aa16.47■□□□□ 0.23
ABCA4-204ENST00000470771 CEP290O15078 2479 aa16.47■□□□□ 0.23
ABCA4-204ENST00000470771 MGAMO43451 1857 aa16.46■□□□□ 0.23
ABCA4-204ENST00000470771 CDK5RAP2Q96SN8 1893 aa16.46■□□□□ 0.23
ABCA4-204ENST00000470771 ZFYP08048 801 aaPredicted RBP16.46■□□□□ 0.23
ABCA4-204ENST00000470771 VCAM1P19320 739 aa16.46■□□□□ 0.23
ABCA4-204ENST00000470771 PLEKHH3Q7Z736 793 aa16.46■□□□□ 0.23
ABCA4-204ENST00000470771 SHISA4Q96DD7 197 aa16.46■□□□□ 0.23
ABCA4-204ENST00000470771 ARHGEF10LQ9HCE6 1279 aa16.46■□□□□ 0.23
ABCA4-204ENST00000470771 TXNRD2Q9NNW7 524 aa16.46■□□□□ 0.23
ABCA4-204ENST00000470771 SIPA1L1O43166 1804 aa16.45■□□□□ 0.22
ABCA4-204ENST00000470771 USP17L12C9JPN9 530 aa16.45■□□□□ 0.22
ABCA4-204ENST00000470771 USP17L21D6R901 530 aa16.45■□□□□ 0.22
ABCA4-204ENST00000470771 ERC2O15083 957 aa16.45■□□□□ 0.22
ABCA4-204ENST00000470771 PRKAB2O43741 272 aa16.45■□□□□ 0.22
ABCA4-204ENST00000470771 FARP2O94887 1054 aaPredicted RBP16.45■□□□□ 0.22
ABCA4-204ENST00000470771 CYP2B6P20813 491 aa16.45■□□□□ 0.22
ABCA4-204ENST00000470771 RGS2P41220 211 aa16.45■□□□□ 0.22
ABCA4-204ENST00000470771 COG2Q14746 738 aa16.45■□□□□ 0.22
ABCA4-204ENST00000470771 C12orf60Q5U649 245 aa16.45■□□□□ 0.22
ABCA4-204ENST00000470771 RPAP3Q9H6T3 665 aaPredicted RBP16.45■□□□□ 0.22
ABCA4-204ENST00000470771 PAK6Q9NQU5 681 aaPredicted RBP16.45■□□□□ 0.22
ABCA4-204ENST00000470771 NR2E3Q9Y5X4 410 aa16.45■□□□□ 0.22
ABCA4-204ENST00000470771 RPTORQ8N122 1335 aa16.45■□□□□ 0.22
ABCA4-204ENST00000470771 CYP2D6P10635 497 aa16.44■□□□□ 0.22
ABCA4-204ENST00000470771 Q3C1V9 767 aa16.44■□□□□ 0.22
ABCA4-204ENST00000470771 GIMAP6Q6P9H5 292 aa16.44■□□□□ 0.22
ABCA4-204ENST00000470771 LBX2Q6XYB7 198 aa16.44■□□□□ 0.22
ABCA4-204ENST00000470771 KBTBD3Q8NAB2 608 aa16.44■□□□□ 0.22
ABCA4-204ENST00000470771 LPAR1Q92633 364 aa16.44■□□□□ 0.22
ABCA4-204ENST00000470771 TANGO6Q9C0B7 1094 aa16.44■□□□□ 0.22
ABCA4-204ENST00000470771 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.44■□□□□ 0.22
ABCA4-204ENST00000470771 IVNS1ABPQ9Y6Y0 642 aa16.44■□□□□ 0.22
ABCA4-204ENST00000470771 H0YGN5 161 aa16.43■□□□□ 0.22
ABCA4-204ENST00000470771 ZKSCAN1P17029 563 aaPredicted RBP16.43■□□□□ 0.22
ABCA4-204ENST00000470771 GNAT2P19087 354 aa16.43■□□□□ 0.22
ABCA4-204ENST00000470771 GUCY1A2P33402 732 aa16.43■□□□□ 0.22
ABCA4-204ENST00000470771 WDR78Q5VTH9 848 aa16.43■□□□□ 0.22
ABCA4-204ENST00000470771 GPR142Q7Z601 462 aa16.43■□□□□ 0.22
ABCA4-204ENST00000470771 ANKLE1Q8NAG6 615 aa16.43■□□□□ 0.22
ABCA4-204ENST00000470771 DYNLL2Q96FJ2 89 aa16.43■□□□□ 0.22
ABCA4-204ENST00000470771 PUS7LQ9H0K6 701 aaKnown RBP16.43■□□□□ 0.22
ABCA4-204ENST00000470771 ZNF287Q9HBT7 754 aa16.43■□□□□ 0.22
ABCA4-204ENST00000470771 ARPP21Q9UBL0 812 aaPredicted RBP16.43■□□□□ 0.22
ABCA4-204ENST00000470771 RNF113AO15541 343 aaKnown RBP16.42■□□□□ 0.22
ABCA4-204ENST00000470771 CDK8P49336 464 aa16.42■□□□□ 0.22
ABCA4-204ENST00000470771 ICA1Q05084 483 aa16.42■□□□□ 0.22
ABCA4-204ENST00000470771 SLFNL1Q499Z3 407 aa16.42■□□□□ 0.22
ABCA4-204ENST00000470771 C16orf86Q6ZW13 317 aa16.42■□□□□ 0.22
ABCA4-204ENST00000470771 NECAB2Q7Z6G3 386 aa16.42■□□□□ 0.22
ABCA4-204ENST00000470771 UBE2Q1Q7Z7E8 422 aa16.42■□□□□ 0.22
ABCA4-204ENST00000470771 MB21D1Q8N884 522 aa16.42■□□□□ 0.22
ABCA4-204ENST00000470771 SLC44A5Q8NCS7 719 aa16.42■□□□□ 0.22
ABCA4-204ENST00000470771 STRBPQ96SI9 672 aaKnown RBP16.42■□□□□ 0.22
ABCA4-204ENST00000470771 CRISPLD2Q9H0B8 497 aa16.42■□□□□ 0.22
ABCA4-204ENST00000470771 PORCNQ9H237 461 aa16.42■□□□□ 0.22
ABCA4-204ENST00000470771 KANSL2Q9H9L4 492 aa16.42■□□□□ 0.22
ABCA4-204ENST00000470771 MKNK2Q9HBH9 465 aa16.42■□□□□ 0.22
ABCA4-204ENST00000470771 TMX2Q9Y320 296 aa16.42■□□□□ 0.22
ABCA4-204ENST00000470771 TTC41PQ6P2S7 1318 aa16.42■□□□□ 0.22
ABCA4-204ENST00000470771 SLC15A5A6NIM6 579 aa16.41■□□□□ 0.22
ABCA4-204ENST00000470771 ATP2B2Q01814 1243 aa16.41■□□□□ 0.22
ABCA4-204ENST00000470771 MAP2K5Q13163 448 aa16.41■□□□□ 0.22
ABCA4-204ENST00000470771 HABP4Q5JVS0 413 aaKnown RBP16.41■□□□□ 0.22
ABCA4-204ENST00000470771 MORN1Q5T089 497 aa16.41■□□□□ 0.22
ABCA4-204ENST00000470771 CTR9Q6PD62 1173 aa16.41■□□□□ 0.22
ABCA4-204ENST00000470771 APPBP2Q92624 585 aa16.41■□□□□ 0.22
ABCA4-204ENST00000470771 APBA2Q99767 749 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms