RNA–Protein interactions for RNA: ENST00000470600.1

TGFBR3-206, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 2

Gene TGFBR3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-206ENST00000470600 CERKLQ49MI3 558 aaPredicted RBP10.33□□□□□ -0.76
TGFBR3-206ENST00000470600 TREML2Q5T2D2 321 aa10.33□□□□□ -0.76
TGFBR3-206ENST00000470600 RASEFQ8IZ41 740 aa10.33□□□□□ -0.76
TGFBR3-206ENST00000470600 NEDD1Q8NHV4 660 aa10.33□□□□□ -0.76
TGFBR3-206ENST00000470600 SLC10A4Q96EP9 437 aa10.33□□□□□ -0.76
TGFBR3-206ENST00000470600 EMILIN3Q9NT22 766 aa10.33□□□□□ -0.76
TGFBR3-206ENST00000470600 RBM8AQ9Y5S9 174 aaKnown RBP10.33□□□□□ -0.76
TGFBR3-206ENST00000470600 SMCHD1A6NHR9 2005 aa10.33□□□□□ -0.76
TGFBR3-206ENST00000470600 LCTP09848 1927 aa10.33□□□□□ -0.76
TGFBR3-206ENST00000470600 MINDY4BA8MYZ0 360 aa10.32□□□□□ -0.76
TGFBR3-206ENST00000470600 CXCL11O14625 94 aa10.32□□□□□ -0.76
TGFBR3-206ENST00000470600 NMT2O60551 498 aa10.32□□□□□ -0.76
TGFBR3-206ENST00000470600 SEC23AQ15436 765 aa10.32□□□□□ -0.76
TGFBR3-206ENST00000470600 ABCB5Q2M3G0 1257 aa10.32□□□□□ -0.76
TGFBR3-206ENST00000470600 AKNAD1Q5T1N1 836 aa10.32□□□□□ -0.76
TGFBR3-206ENST00000470600 CYB5R4Q7L1T6 521 aa10.32□□□□□ -0.76
TGFBR3-206ENST00000470600 IFNL1Q8IU54 200 aa10.32□□□□□ -0.76
TGFBR3-206ENST00000470600 MB21D2Q8IYB1 491 aaPredicted RBP10.32□□□□□ -0.76
TGFBR3-206ENST00000470600 ZNF280CQ8ND82 737 aa10.32□□□□□ -0.76
TGFBR3-206ENST00000470600 CSADQ9Y600 493 aa10.32□□□□□ -0.76
TGFBR3-206ENST00000470600 ZHX2Q9Y6X8 837 aa10.32□□□□□ -0.76
TGFBR3-206ENST00000470600 DOCK3Q8IZD9 2030 aa10.32□□□□□ -0.76
TGFBR3-206ENST00000470600 MKI67P46013 3256 aaKnown RBP10.32□□□□□ -0.76
TGFBR3-206ENST00000470600 MANSC4A6NHS7 340 aaPredicted RBP10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 USP17L5A8MUK1 530 aa10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 SLC27A2O14975 620 aa10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 FOXN1O15353 648 aa10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 HSPA8P11142 646 aaKnown RBP10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 CTGFP29279 349 aa10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 BACE1P56817 501 aa10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 SPP2Q13103 211 aa10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 TSGA10IPQ3SY00 556 aa10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 FAM47AQ5JRC9 791 aa10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 TMEM179Q6ZVK1 233 aa10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 STK11IPQ8N1F8 1099 aa10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 CRACR2BQ8N4Y2 399 aaPredicted RBP10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 MKL1Q969V6 931 aa10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 CEP95Q96GE4 821 aa10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 CCDC17Q96LX7 622 aa10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 KIAA1683Q9H0B3 1180 aa10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 SENP2Q9HC62 589 aa10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 RNF186Q9NXI6 227 aa10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 MTMR4Q9NYA4 1195 aa10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 TMX2Q9Y320 296 aa10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 CASP8AP2Q9UKL3 1982 aa10.31□□□□□ -0.76
TGFBR3-206ENST00000470600 CCL15-CCL14A0A0B4J2E2 113 aa10.3□□□□□ -0.76
TGFBR3-206ENST00000470600 HSPA1AP0DMV8 641 aaKnown RBP10.3□□□□□ -0.76
TGFBR3-206ENST00000470600 HSPA1BP0DMV9 641 aaKnown RBP10.3□□□□□ -0.76
TGFBR3-206ENST00000470600 HMGCS2P54868 508 aa10.3□□□□□ -0.76
TGFBR3-206ENST00000470600 MTMR2Q13614 643 aa10.3□□□□□ -0.76
TGFBR3-206ENST00000470600 CCL15Q16663 113 aa10.3□□□□□ -0.76
TGFBR3-206ENST00000470600 SLC35G1Q2M3R5 365 aa10.3□□□□□ -0.76
TGFBR3-206ENST00000470600 ADCK5Q3MIX3 580 aa10.3□□□□□ -0.76
TGFBR3-206ENST00000470600 ANKRD23Q86SG2 305 aa10.3□□□□□ -0.76
TGFBR3-206ENST00000470600 ANKS1AQ92625 1134 aa10.3□□□□□ -0.76
TGFBR3-206ENST00000470600 TBC1D2Q9BYX2 928 aa10.3□□□□□ -0.76
TGFBR3-206ENST00000470600 NACAP1Q9BZK3 213 aa10.3□□□□□ -0.76
TGFBR3-206ENST00000470600 ZCCHC17Q9NP64 241 aaKnown RBP10.3□□□□□ -0.76
TGFBR3-206ENST00000470600 TCP11L1Q9NUJ3 509 aa10.3□□□□□ -0.76
TGFBR3-206ENST00000470600 NYAP2Q9P242 653 aa10.3□□□□□ -0.76
TGFBR3-206ENST00000470600 ZNF236Q9UL36 1845 aa10.3□□□□□ -0.76
TGFBR3-206ENST00000470600 TRIM75PA6NK02 468 aa10.29□□□□□ -0.76
TGFBR3-206ENST00000470600 E7EWF7 191 aa10.29□□□□□ -0.76
TGFBR3-206ENST00000470600 PEX10O60683 326 aa10.29□□□□□ -0.76
TGFBR3-206ENST00000470600 CNMDO75829 334 aa10.29□□□□□ -0.76
TGFBR3-206ENST00000470600 APPP05067 770 aa10.29□□□□□ -0.76
TGFBR3-206ENST00000470600 BCRP11274 1271 aa10.29□□□□□ -0.76
TGFBR3-206ENST00000470600 EEF2P13639 858 aaKnown RBP10.29□□□□□ -0.76
TGFBR3-206ENST00000470600 HOXA7P31268 230 aaPredicted RBP10.29□□□□□ -0.76
TGFBR3-206ENST00000470600 HSPA4P34932 840 aa10.29□□□□□ -0.76
TGFBR3-206ENST00000470600 GTF2A2P52657 109 aa10.29□□□□□ -0.76
TGFBR3-206ENST00000470600 MFAP1P55081 439 aaKnown RBP10.29□□□□□ -0.76
TGFBR3-206ENST00000470600 SNAPC2Q13487 334 aa10.29□□□□□ -0.76
TGFBR3-206ENST00000470600 NOM1Q5C9Z4 860 aaKnown RBP10.29□□□□□ -0.76
TGFBR3-206ENST00000470600 CREB3L3Q68CJ9 461 aa10.29□□□□□ -0.76
TGFBR3-206ENST00000470600 PROCA1Q8NCQ7 364 aaPredicted RBP10.29□□□□□ -0.76
TGFBR3-206ENST00000470600 REPS2Q8NFH8 660 aa10.29□□□□□ -0.76
TGFBR3-206ENST00000470600 USP26Q9BXU7 913 aa10.29□□□□□ -0.76
TGFBR3-206ENST00000470600 GPHNQ9NQX3 736 aaPredicted RBP10.29□□□□□ -0.76
TGFBR3-206ENST00000470600 SAGE1Q9NXZ1 904 aa10.29□□□□□ -0.76
TGFBR3-206ENST00000470600 AGTPBP1Q9UPW5 1226 aa10.29□□□□□ -0.76
TGFBR3-206ENST00000470600 B4E1Z4 1266 aa10.28□□□□□ -0.76
TGFBR3-206ENST00000470600 USP17L10C9JJH3 530 aa10.28□□□□□ -0.76
TGFBR3-206ENST00000470600 EPB41L2O43491 1005 aaKnown RBP10.28□□□□□ -0.76
TGFBR3-206ENST00000470600 SNHG28P0DPA3 235 aa10.28□□□□□ -0.76
TGFBR3-206ENST00000470600 PCP11498 1178 aaKnown RBP10.28□□□□□ -0.76
TGFBR3-206ENST00000470600 VCAM1P19320 739 aa10.28□□□□□ -0.76
TGFBR3-206ENST00000470600 TFAP4Q01664 338 aa10.28□□□□□ -0.76
TGFBR3-206ENST00000470600 ICA1Q05084 483 aa10.28□□□□□ -0.76
TGFBR3-206ENST00000470600 CRHR2Q13324 411 aa10.28□□□□□ -0.76
TGFBR3-206ENST00000470600 C17orf99Q6UX52 265 aa10.28□□□□□ -0.76
TGFBR3-206ENST00000470600 RUFY2Q8WXA3 655 aa10.28□□□□□ -0.76
TGFBR3-206ENST00000470600 VCPKMTQ9H867 229 aa10.28□□□□□ -0.76
TGFBR3-206ENST00000470600 ZSWIM5Q9P217 1185 aa10.28□□□□□ -0.76
TGFBR3-206ENST00000470600 SLC45A1Q9Y2W3 748 aa10.28□□□□□ -0.76
TGFBR3-206ENST00000470600 NDUFB10O96000 172 aa10.27□□□□□ -0.77
TGFBR3-206ENST00000470600 CETPP11597 493 aa10.27□□□□□ -0.77
TGFBR3-206ENST00000470600 EXOSC10Q01780 885 aaKnown RBP10.27□□□□□ -0.77
TGFBR3-206ENST00000470600 GRM1Q13255 1194 aa10.27□□□□□ -0.77
TGFBR3-206ENST00000470600 RAB3GAP1Q15042 981 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms