RNA–Protein interactions for RNA: ENST00000470581.1

SEMA3C-207, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-207ENST00000470581 C17orf99Q6UX52 265 aa29.47■■■□□ 2.31
SEMA3C-207ENST00000470581 MKNK2Q9HBH9 465 aa29.47■■■□□ 2.31
SEMA3C-207ENST00000470581 ROBO3Q96MS0 1386 aa29.47■■■□□ 2.31
SEMA3C-207ENST00000470581 ADGRA2Q96PE1 1338 aa29.46■■■□□ 2.31
SEMA3C-207ENST00000470581 HIP1O00291 1037 aa29.46■■■□□ 2.31
SEMA3C-207ENST00000470581 ZYXQ15942 572 aaKnown RBP29.46■■■□□ 2.31
SEMA3C-207ENST00000470581 ACER1Q8TDN7 264 aa29.46■■■□□ 2.31
SEMA3C-207ENST00000470581 PNMA3Q9UL41 463 aa29.46■■■□□ 2.31
SEMA3C-207ENST00000470581 ZNF589Q86UQ0 364 aaPredicted RBP29.45■■■□□ 2.31
SEMA3C-207ENST00000470581 SMCR8Q8TEV9 937 aaPredicted RBP29.45■■■□□ 2.31
SEMA3C-207ENST00000470581 KIAA1683Q9H0B3 1180 aa29.45■■■□□ 2.31
SEMA3C-207ENST00000470581 EMILIN3Q9NT22 766 aa29.45■■■□□ 2.31
SEMA3C-207ENST00000470581 CCDC171Q6TFL3 1326 aa29.45■■■□□ 2.3
SEMA3C-207ENST00000470581 OSBPP22059 807 aa29.44■■■□□ 2.3
SEMA3C-207ENST00000470581 USP14P54578 494 aa29.44■■■□□ 2.3
SEMA3C-207ENST00000470581 CWC27Q6UX04 472 aaKnown RBP29.44■■■□□ 2.3
SEMA3C-207ENST00000470581 ZNF287Q9HBT7 754 aa29.44■■■□□ 2.3
SEMA3C-207ENST00000470581 SLC3A2P08195 630 aaKnown RBP29.43■■■□□ 2.3
SEMA3C-207ENST00000470581 MFAP1P55081 439 aaKnown RBP29.43■■■□□ 2.3
SEMA3C-207ENST00000470581 PPARAQ07869 468 aa29.43■■■□□ 2.3
SEMA3C-207ENST00000470581 CCDC136Q96JN2 1154 aa29.43■■■□□ 2.3
SEMA3C-207ENST00000470581 TRIM17Q9Y577 477 aa29.43■■■□□ 2.3
SEMA3C-207ENST00000470581 RASA1P20936 1047 aa29.42■■■□□ 2.3
SEMA3C-207ENST00000470581 KIF22Q14807 665 aa29.42■■■□□ 2.3
SEMA3C-207ENST00000470581 ALX1Q15699 326 aa29.42■■■□□ 2.3
SEMA3C-207ENST00000470581 PKN2Q16513 984 aaKnown RBP29.42■■■□□ 2.3
SEMA3C-207ENST00000470581 ASCC2Q9H1I8 757 aaPredicted RBP29.42■■■□□ 2.3
SEMA3C-207ENST00000470581 HSPD1P10809 573 aaKnown RBP29.41■■■□□ 2.3
SEMA3C-207ENST00000470581 BCRP11274 1271 aa29.41■■■□□ 2.3
SEMA3C-207ENST00000470581 HOXA7P31268 230 aaPredicted RBP29.41■■■□□ 2.3
SEMA3C-207ENST00000470581 ICA1Q05084 483 aa29.41■■■□□ 2.3
SEMA3C-207ENST00000470581 PDE4BQ07343 736 aa29.41■■■□□ 2.3
SEMA3C-207ENST00000470581 ARHGEF6Q15052 776 aa29.41■■■□□ 2.3
SEMA3C-207ENST00000470581 OTOP1Q7RTM1 612 aa29.41■■■□□ 2.3
SEMA3C-207ENST00000470581 CLEC10AQ8IUN9 316 aa29.41■■■□□ 2.3
SEMA3C-207ENST00000470581 ZNF444Q8N0Y2 327 aaPredicted RBP29.41■■■□□ 2.3
SEMA3C-207ENST00000470581 ABHD8Q96I13 439 aa29.41■■■□□ 2.3
SEMA3C-207ENST00000470581 C12orf42Q96LP6 360 aa29.41■■■□□ 2.3
SEMA3C-207ENST00000470581 EFCC1Q9HA90 598 aa29.41■■■□□ 2.3
SEMA3C-207ENST00000470581 A0A1W2PRG0 241 aa29.4■■■□□ 2.3
SEMA3C-207ENST00000470581 PRDM1O75626 825 aa29.4■■■□□ 2.3
SEMA3C-207ENST00000470581 IRX3P78415 501 aaPredicted RBP29.4■■■□□ 2.3
SEMA3C-207ENST00000470581 LACTBP83111 547 aaPredicted RBP29.4■■■□□ 2.3
SEMA3C-207ENST00000470581 CAP1Q01518 475 aa29.4■■■□□ 2.3
SEMA3C-207ENST00000470581 ARHGEF10LQ9HCE6 1279 aa29.4■■■□□ 2.3
SEMA3C-207ENST00000470581 FGAP02671 866 aa29.39■■■□□ 2.3
SEMA3C-207ENST00000470581 IFFO2Q5TF58 517 aa29.39■■■□□ 2.3
SEMA3C-207ENST00000470581 KANSL2Q9H9L4 492 aa29.39■■■□□ 2.3
SEMA3C-207ENST00000470581 ECM2O94769 699 aaPredicted RBP29.38■■■□□ 2.29
SEMA3C-207ENST00000470581 SIAH1Q8IUQ4 282 aa29.38■■■□□ 2.29
SEMA3C-207ENST00000470581 ATP2B2Q01814 1243 aa29.37■■■□□ 2.29
SEMA3C-207ENST00000470581 CTDSPL2Q05D32 466 aa29.37■■■□□ 2.29
SEMA3C-207ENST00000470581 FBXO46Q6PJ61 603 aaPredicted RBP29.37■■■□□ 2.29
SEMA3C-207ENST00000470581 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.37■■■□□ 2.29
SEMA3C-207ENST00000470581 ARHGAP39Q9C0H5 1083 aa29.37■■■□□ 2.29
SEMA3C-207ENST00000470581 SH2D4AQ9H788 454 aa29.37■■■□□ 2.29
SEMA3C-207ENST00000470581 EEF2P13639 858 aaKnown RBP29.36■■■□□ 2.29
SEMA3C-207ENST00000470581 VCAM1P19320 739 aa29.36■■■□□ 2.29
SEMA3C-207ENST00000470581 GCLCP48506 637 aaPredicted RBP29.36■■■□□ 2.29
SEMA3C-207ENST00000470581 ANKRD13CQ8N6S4 541 aa29.36■■■□□ 2.29
SEMA3C-207ENST00000470581 P2RX7Q99572 595 aaKnown RBP29.36■■■□□ 2.29
SEMA3C-207ENST00000470581 ANAPC4Q9UJX5 808 aa29.36■■■□□ 2.29
SEMA3C-207ENST00000470581 TMX2Q9Y320 296 aa29.36■■■□□ 2.29
SEMA3C-207ENST00000470581 USP17L15C9J2P7 530 aa29.35■■■□□ 2.29
SEMA3C-207ENST00000470581 USP17L13C9JLJ4 530 aa29.35■■■□□ 2.29
SEMA3C-207ENST00000470581 USP17L11C9JVI0 530 aa29.35■■■□□ 2.29
SEMA3C-207ENST00000470581 USP17L18D6R9N7 530 aa29.35■■■□□ 2.29
SEMA3C-207ENST00000470581 USP17L22D6RA61 530 aa29.35■■■□□ 2.29
SEMA3C-207ENST00000470581 USP17L17D6RBQ6 530 aa29.35■■■□□ 2.29
SEMA3C-207ENST00000470581 USP17L19D6RCP7 530 aa29.35■■■□□ 2.29
SEMA3C-207ENST00000470581 USP17L20D6RJB6 530 aa29.35■■■□□ 2.29
SEMA3C-207ENST00000470581 USP17L24Q0WX57 530 aa29.35■■■□□ 2.29
SEMA3C-207ENST00000470581 ZSWIM8A7E2V4 1837 aa29.35■■■□□ 2.29
SEMA3C-207ENST00000470581 ZMYM6O95789 1325 aa29.35■■■□□ 2.29
SEMA3C-207ENST00000470581 GREB1LQ9C091 1923 aaPredicted RBP29.34■■■□□ 2.29
SEMA3C-207ENST00000470581 CAPN15O75808 1086 aa29.34■■■□□ 2.29
SEMA3C-207ENST00000470581 PSMC4P43686 418 aa29.34■■■□□ 2.29
SEMA3C-207ENST00000470581 SKAP1Q86WV1 359 aa29.34■■■□□ 2.29
SEMA3C-207ENST00000470581 FMNL1O95466 1100 aaPredicted RBP29.33■■■□□ 2.29
SEMA3C-207ENST00000470581 HERVK_113P62684 666 aa29.33■■■□□ 2.29
SEMA3C-207ENST00000470581 FAM110CQ1W6H9 321 aa29.33■■■□□ 2.29
SEMA3C-207ENST00000470581 CATSPERGQ6ZRH7 1159 aa29.33■■■□□ 2.29
SEMA3C-207ENST00000470581 RPAP3Q9H6T3 665 aaPredicted RBP29.33■■■□□ 2.29
SEMA3C-207ENST00000470581 INCENPQ9NQS7 918 aa29.33■■■□□ 2.29
SEMA3C-207ENST00000470581 PTPN22Q9Y2R2 807 aa29.33■■■□□ 2.29
SEMA3C-207ENST00000470581 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.33■■■□□ 2.29
SEMA3C-207ENST00000470581 TSPY3P0CV98 308 aa29.32■■■□□ 2.28
SEMA3C-207ENST00000470581 TSPY8P0CW00 308 aa29.32■■■□□ 2.28
SEMA3C-207ENST00000470581 CHMLP26374 656 aa29.32■■■□□ 2.28
SEMA3C-207ENST00000470581 CTGFP29279 349 aa29.32■■■□□ 2.28
SEMA3C-207ENST00000470581 FAM47AQ5JRC9 791 aa29.32■■■□□ 2.28
SEMA3C-207ENST00000470581 RUFY2Q8WXA3 655 aa29.32■■■□□ 2.28
SEMA3C-207ENST00000470581 TRIM47Q96LD4 638 aa29.32■■■□□ 2.28
SEMA3C-207ENST00000470581 VCPKMTQ9H867 229 aa29.32■■■□□ 2.28
SEMA3C-207ENST00000470581 HPS5Q9UPZ3 1129 aa29.32■■■□□ 2.28
SEMA3C-207ENST00000470581 GNRH1P01148 92 aa29.31■■■□□ 2.28
SEMA3C-207ENST00000470581 TFAP4Q01664 338 aa29.31■■■□□ 2.28
SEMA3C-207ENST00000470581 KIAA1755Q5JYT7 1200 aa29.31■■■□□ 2.28
SEMA3C-207ENST00000470581 LPAR1Q92633 364 aa29.31■■■□□ 2.28
SEMA3C-207ENST00000470581 NYAP2Q9P242 653 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms