RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-208ENST00000470458 ZMYM1Q5SVZ6 1142 aa12.98□□□□□ -0.33
RFTN1-208ENST00000470458 CTR9Q6PD62 1173 aa12.98□□□□□ -0.33
RFTN1-208ENST00000470458 CD99L2Q8TCZ2 262 aa12.98□□□□□ -0.33
RFTN1-208ENST00000470458 NAPBQ9H115 298 aa12.98□□□□□ -0.33
RFTN1-208ENST00000470458 R3HDMLQ9H3Y0 253 aa12.98□□□□□ -0.33
RFTN1-208ENST00000470458 SYNPO2Q9UMS6 1093 aa12.98□□□□□ -0.33
RFTN1-208ENST00000470458 HPS5Q9UPZ3 1129 aa12.98□□□□□ -0.33
RFTN1-208ENST00000470458 LOC285556D6RIA3 1793 aa12.98□□□□□ -0.33
RFTN1-208ENST00000470458 GSG1L2A8MUP6 293 aa12.97□□□□□ -0.33
RFTN1-208ENST00000470458 BCRP11274 1271 aa12.97□□□□□ -0.33
RFTN1-208ENST00000470458 PSMC4P43686 418 aa12.97□□□□□ -0.33
RFTN1-208ENST00000470458 CDK8P49336 464 aa12.97□□□□□ -0.33
RFTN1-208ENST00000470458 OSBP2Q969R2 916 aa12.97□□□□□ -0.33
RFTN1-208ENST00000470458 TRIM47Q96LD4 638 aa12.97□□□□□ -0.33
RFTN1-208ENST00000470458 TMEM106CQ9BVX2 250 aa12.97□□□□□ -0.33
RFTN1-208ENST00000470458 GOPCQ9HD26 462 aa12.97□□□□□ -0.33
RFTN1-208ENST00000470458 CPA4Q9UI42 421 aa12.97□□□□□ -0.33
RFTN1-208ENST00000470458 DDX60LQ5H9U9 1706 aaKnown RBP12.96□□□□□ -0.33
RFTN1-208ENST00000470458 MINDY4BA8MYZ0 360 aa12.96□□□□□ -0.33
RFTN1-208ENST00000470458 CAPN15O75808 1086 aa12.96□□□□□ -0.33
RFTN1-208ENST00000470458 SLC9C1Q4G0N8 1177 aa12.96□□□□□ -0.33
RFTN1-208ENST00000470458 TSHZ3Q63HK5 1081 aa12.96□□□□□ -0.33
RFTN1-208ENST00000470458 IFNL3Q8IZI9 196 aa12.96□□□□□ -0.33
RFTN1-208ENST00000470458 MB21D1Q8N884 522 aa12.96□□□□□ -0.33
RFTN1-208ENST00000470458 GPRC5AQ8NFJ5 357 aa12.96□□□□□ -0.33
RFTN1-208ENST00000470458 RAET1EQ8TD07 263 aa12.96□□□□□ -0.33
RFTN1-208ENST00000470458 RILPL2Q969X0 211 aa12.96□□□□□ -0.33
RFTN1-208ENST00000470458 ASCC2Q9H1I8 757 aaPredicted RBP12.96□□□□□ -0.33
RFTN1-208ENST00000470458 ADGRA2Q96PE1 1338 aa12.95□□□□□ -0.34
RFTN1-208ENST00000470458 TNPO2O14787 897 aaKnown RBP12.95□□□□□ -0.34
RFTN1-208ENST00000470458 PRKAB2O43741 272 aa12.95□□□□□ -0.34
RFTN1-208ENST00000470458 IGHDP01880 384 aa12.95□□□□□ -0.34
RFTN1-208ENST00000470458 CYP2C8P10632 490 aa12.95□□□□□ -0.34
RFTN1-208ENST00000470458 MAPK4P31152 587 aa12.95□□□□□ -0.34
RFTN1-208ENST00000470458 RGS19P49795 217 aa12.95□□□□□ -0.34
RFTN1-208ENST00000470458 ICA1Q05084 483 aa12.95□□□□□ -0.34
RFTN1-208ENST00000470458 RRP1BQ14684 758 aaKnown RBP12.95□□□□□ -0.34
RFTN1-208ENST00000470458 ALX1Q15699 326 aa12.95□□□□□ -0.34
RFTN1-208ENST00000470458 SLC4A8Q2Y0W8 1093 aa12.95□□□□□ -0.34
RFTN1-208ENST00000470458 PLEKHM2Q8IWE5 1019 aa12.95□□□□□ -0.34
RFTN1-208ENST00000470458 TRMT44Q8IYL2 757 aaKnown RBP12.95□□□□□ -0.34
RFTN1-208ENST00000470458 RUFY2Q8WXA3 655 aa12.95□□□□□ -0.34
RFTN1-208ENST00000470458 SRRDQ9UH36 339 aa12.95□□□□□ -0.34
RFTN1-208ENST00000470458 MGAMO43451 1857 aa12.95□□□□□ -0.34
RFTN1-208ENST00000470458 ROBO3Q96MS0 1386 aa12.94□□□□□ -0.34
RFTN1-208ENST00000470458 MYPNQ86TC9 1320 aa12.94□□□□□ -0.34
RFTN1-208ENST00000470458 UBXN2AP68543 259 aa12.94□□□□□ -0.34
RFTN1-208ENST00000470458 COG2Q14746 738 aa12.94□□□□□ -0.34
RFTN1-208ENST00000470458 SEPT2Q15019 361 aa12.94□□□□□ -0.34
RFTN1-208ENST00000470458 TREML2Q5T2D2 321 aa12.94□□□□□ -0.34
RFTN1-208ENST00000470458 LBX2Q6XYB7 198 aa12.94□□□□□ -0.34
RFTN1-208ENST00000470458 CATSPERGQ6ZRH7 1159 aa12.94□□□□□ -0.34
RFTN1-208ENST00000470458 SLAIN1Q8ND83 568 aa12.94□□□□□ -0.34
RFTN1-208ENST00000470458 OTUD7AQ8TE49 926 aaPredicted RBP12.94□□□□□ -0.34
RFTN1-208ENST00000470458 PXYLP1Q8TE99 480 aa12.94□□□□□ -0.34
RFTN1-208ENST00000470458 ARMC5Q96C12 935 aa12.94□□□□□ -0.34
RFTN1-208ENST00000470458 CWC22Q9HCG8 908 aaKnown RBP12.94□□□□□ -0.34
RFTN1-208ENST00000470458 DIAPH3Q9NSV4 1193 aa12.94□□□□□ -0.34
RFTN1-208ENST00000470458 MORF4L1Q9UBU8 362 aa12.94□□□□□ -0.34
RFTN1-208ENST00000470458 TMX2Q9Y320 296 aa12.94□□□□□ -0.34
RFTN1-208ENST00000470458 RABGAP1Q9Y3P9 1069 aa12.94□□□□□ -0.34
RFTN1-208ENST00000470458 ZMYM6O95789 1325 aa12.93□□□□□ -0.34
RFTN1-208ENST00000470458 WDR46O15213 610 aaKnown RBP12.93□□□□□ -0.34
RFTN1-208ENST00000470458 NEFLP07196 543 aa12.93□□□□□ -0.34
RFTN1-208ENST00000470458 HERVK_113P62684 666 aa12.93□□□□□ -0.34
RFTN1-208ENST00000470458 IRF5Q13568 498 aa12.93□□□□□ -0.34
RFTN1-208ENST00000470458 ANKRD13CQ8N6S4 541 aa12.93□□□□□ -0.34
RFTN1-208ENST00000470458 NKX2-3Q8TAU0 364 aa12.93□□□□□ -0.34
RFTN1-208ENST00000470458 RNF41Q9H4P4 317 aaPredicted RBP12.93□□□□□ -0.34
RFTN1-208ENST00000470458 EMILIN3Q9NT22 766 aa12.93□□□□□ -0.34
RFTN1-208ENST00000470458 NYAP2Q9P242 653 aa12.93□□□□□ -0.34
RFTN1-208ENST00000470458 CTNNA3Q9UI47 895 aa12.93□□□□□ -0.34
RFTN1-208ENST00000470458 M0R2C6 588 aa12.92□□□□□ -0.34
RFTN1-208ENST00000470458 TSPY3P0CV98 308 aa12.92□□□□□ -0.34
RFTN1-208ENST00000470458 TSPY8P0CW00 308 aa12.92□□□□□ -0.34
RFTN1-208ENST00000470458 SLURP2P0DP57 97 aa12.92□□□□□ -0.34
RFTN1-208ENST00000470458 FDX1P10109 184 aa12.92□□□□□ -0.34
RFTN1-208ENST00000470458 SDSP20132 328 aa12.92□□□□□ -0.34
RFTN1-208ENST00000470458 COPB2P35606 906 aa12.92□□□□□ -0.34
RFTN1-208ENST00000470458 MLLT1Q03111 559 aaPredicted RBP12.92□□□□□ -0.34
RFTN1-208ENST00000470458 PPARAQ07869 468 aa12.92□□□□□ -0.34
RFTN1-208ENST00000470458 CCDC178Q5BJE1 867 aa12.92□□□□□ -0.34
RFTN1-208ENST00000470458 SOCS4Q8WXH5 440 aa12.92□□□□□ -0.34
RFTN1-208ENST00000470458 VCPKMTQ9H867 229 aa12.92□□□□□ -0.34
RFTN1-208ENST00000470458 SLC5A4Q9NY91 659 aa12.92□□□□□ -0.34
RFTN1-208ENST00000470458 ANAPC4Q9UJX5 808 aa12.92□□□□□ -0.34
RFTN1-208ENST00000470458 STRNO43815 780 aa12.91□□□□□ -0.34
RFTN1-208ENST00000470458 TTLL1O95922 423 aa12.91□□□□□ -0.34
RFTN1-208ENST00000470458 CYP2D6P10635 497 aa12.91□□□□□ -0.34
RFTN1-208ENST00000470458 VCAM1P19320 739 aa12.91□□□□□ -0.34
RFTN1-208ENST00000470458 GRK4P32298 578 aa12.91□□□□□ -0.34
RFTN1-208ENST00000470458 CENPQQ7L2Z9 268 aaPredicted RBP12.91□□□□□ -0.34
RFTN1-208ENST00000470458 CCDC84Q86UT8 332 aaPredicted RBP12.91□□□□□ -0.34
RFTN1-208ENST00000470458 DYNLL2Q96FJ2 89 aa12.91□□□□□ -0.34
RFTN1-208ENST00000470458 P2RX7Q99572 595 aaKnown RBP12.91□□□□□ -0.34
RFTN1-208ENST00000470458 NUDT12Q9BQG2 462 aa12.91□□□□□ -0.34
RFTN1-208ENST00000470458 TANGO6Q9C0B7 1094 aa12.91□□□□□ -0.34
RFTN1-208ENST00000470458 IVNS1ABPQ9Y6Y0 642 aa12.91□□□□□ -0.34
RFTN1-208ENST00000470458 CCDC171Q6TFL3 1326 aa12.9□□□□□ -0.34
RFTN1-208ENST00000470458 XRCC5P13010 732 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms