RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 CYP4F22Q6NT55 531 aa7.98□□□□□ -1.13
VAMP3-202ENST00000470357 ZNF804AQ7Z570 1209 aa7.98□□□□□ -1.13
VAMP3-202ENST00000470357 KBTBD3Q8NAB2 608 aa7.98□□□□□ -1.13
VAMP3-202ENST00000470357 ITPKCQ96DU7 683 aa7.98□□□□□ -1.13
VAMP3-202ENST00000470357 CAPNS2Q96L46 248 aa7.98□□□□□ -1.13
VAMP3-202ENST00000470357 GPR101Q96P66 508 aaPredicted RBP7.98□□□□□ -1.13
VAMP3-202ENST00000470357 DNAJC2Q99543 621 aaKnown RBP7.98□□□□□ -1.13
VAMP3-202ENST00000470357 ZFAND3Q9H8U3 227 aa7.98□□□□□ -1.13
VAMP3-202ENST00000470357 GGA1Q9UJY5 639 aa7.98□□□□□ -1.13
VAMP3-202ENST00000470357 ABT1Q9ULW3 272 aaKnown RBP7.98□□□□□ -1.13
VAMP3-202ENST00000470357 PDE4DIPQ5VU43 2346 aa7.98□□□□□ -1.13
VAMP3-202ENST00000470357 ADORA1P30542 326 aa7.97□□□□□ -1.13
VAMP3-202ENST00000470357 HIBADHP31937 336 aaKnown RBP7.97□□□□□ -1.13
VAMP3-202ENST00000470357 MFAP1P55081 439 aaKnown RBP7.97□□□□□ -1.13
VAMP3-202ENST00000470357 RAB15P59190 212 aa7.97□□□□□ -1.13
VAMP3-202ENST00000470357 KIAA1211Q6ZU35 1233 aa7.97□□□□□ -1.13
VAMP3-202ENST00000470357 CCDC116Q8IYX3 515 aa7.97□□□□□ -1.13
VAMP3-202ENST00000470357 GPC2Q8N158 579 aa7.97□□□□□ -1.13
VAMP3-202ENST00000470357 SUPT20HQ8NEM7 779 aa7.97□□□□□ -1.13
VAMP3-202ENST00000470357 EYA3Q99504 573 aa7.97□□□□□ -1.13
VAMP3-202ENST00000470357 ESYT1Q9BSJ8 1104 aa7.97□□□□□ -1.13
VAMP3-202ENST00000470357 MCOLN1Q9GZU1 580 aa7.97□□□□□ -1.13
VAMP3-202ENST00000470357 ATP13A2Q9NQ11 1180 aa7.97□□□□□ -1.13
VAMP3-202ENST00000470357 DENND2AQ9ULE3 1009 aa7.97□□□□□ -1.13
VAMP3-202ENST00000470357 NSFL1CQ9UNZ2 370 aaKnown RBP7.97□□□□□ -1.13
VAMP3-202ENST00000470357 COL4A5P29400 1685 aa7.97□□□□□ -1.13
VAMP3-202ENST00000470357 MED23Q9ULK4 1368 aa7.97□□□□□ -1.13
VAMP3-202ENST00000470357 MYO5AQ9Y4I1 1855 aaKnown RBP7.96□□□□□ -1.13
VAMP3-202ENST00000470357 GOLIM4O00461 696 aa7.96□□□□□ -1.14
VAMP3-202ENST00000470357 AOC2O75106 756 aa7.96□□□□□ -1.14
VAMP3-202ENST00000470357 FRAT2O75474 233 aaPredicted RBP7.96□□□□□ -1.14
VAMP3-202ENST00000470357 UFL1O94874 794 aa7.96□□□□□ -1.14
VAMP3-202ENST00000470357 MCCP23508 829 aa7.96□□□□□ -1.14
VAMP3-202ENST00000470357 IARSP41252 1262 aaKnown RBP7.96□□□□□ -1.14
VAMP3-202ENST00000470357 PHKA1P46020 1223 aa7.96□□□□□ -1.14
VAMP3-202ENST00000470357 SCNN1DP51172 638 aa7.96□□□□□ -1.14
VAMP3-202ENST00000470357 WASHC4Q2M389 1173 aa7.96□□□□□ -1.14
VAMP3-202ENST00000470357 INTS6LQ5JSJ4 861 aaKnown RBP7.96□□□□□ -1.14
VAMP3-202ENST00000470357 PPP1R26Q5T8A7 1209 aaPredicted RBP7.96□□□□□ -1.14
VAMP3-202ENST00000470357 FBXO33Q7Z6M2 555 aa7.96□□□□□ -1.14
VAMP3-202ENST00000470357 RTKN2Q8IZC4 609 aa7.96□□□□□ -1.14
VAMP3-202ENST00000470357 ZGPATQ8N5A5 531 aaKnown RBP7.96□□□□□ -1.14
VAMP3-202ENST00000470357 SPATA5Q8NB90 893 aa7.96□□□□□ -1.14
VAMP3-202ENST00000470357 POM121Q96HA1 1249 aa7.96□□□□□ -1.14
VAMP3-202ENST00000470357 GMPR2Q9P2T1 348 aaKnown RBP7.96□□□□□ -1.14
VAMP3-202ENST00000470357 MAST2Q6P0Q8 1798 aa7.96□□□□□ -1.14
VAMP3-202ENST00000470357 TRAF5O00463 557 aa7.95□□□□□ -1.14
VAMP3-202ENST00000470357 MAP4K4O95819 1239 aaPredicted RBP7.95□□□□□ -1.14
VAMP3-202ENST00000470357 BMP1P13497 986 aa7.95□□□□□ -1.14
VAMP3-202ENST00000470357 MAP2K2P36507 400 aa7.95□□□□□ -1.14
VAMP3-202ENST00000470357 ANP32AP39687 249 aaKnown RBP7.95□□□□□ -1.14
VAMP3-202ENST00000470357 EPS15P42566 896 aa7.95□□□□□ -1.14
VAMP3-202ENST00000470357 ECE1P42892 770 aa7.95□□□□□ -1.14
VAMP3-202ENST00000470357 MCAMP43121 646 aa7.95□□□□□ -1.14
VAMP3-202ENST00000470357 GPSM2P81274 684 aa7.95□□□□□ -1.14
VAMP3-202ENST00000470357 MAP3K12Q12852 859 aa7.95□□□□□ -1.14
VAMP3-202ENST00000470357 NBPF20Q3BBV1 942 aa7.95□□□□□ -1.14
VAMP3-202ENST00000470357 SPTY2D1Q68D10 685 aaPredicted RBP7.95□□□□□ -1.14
VAMP3-202ENST00000470357 DPP8Q6V1X1 898 aaPredicted RBP7.95□□□□□ -1.14
VAMP3-202ENST00000470357 FAM84BQ96KN1 310 aaPredicted RBP7.95□□□□□ -1.14
VAMP3-202ENST00000470357 PSMD1Q99460 953 aa7.95□□□□□ -1.14
VAMP3-202ENST00000470357 HELLSQ9NRZ9 838 aa7.95□□□□□ -1.14
VAMP3-202ENST00000470357 HMG20BQ9P0W2 317 aa7.95□□□□□ -1.14
VAMP3-202ENST00000470357 ESPNB1AK53 854 aa7.94□□□□□ -1.14
VAMP3-202ENST00000470357 RNF113AO15541 343 aaKnown RBP7.94□□□□□ -1.14
VAMP3-202ENST00000470357 SGSM2O43147 1006 aa7.94□□□□□ -1.14
VAMP3-202ENST00000470357 ZAP70P43403 619 aa7.94□□□□□ -1.14
VAMP3-202ENST00000470357 GYG1P46976 350 aa7.94□□□□□ -1.14
VAMP3-202ENST00000470357 VAC14Q08AM6 782 aa7.94□□□□□ -1.14
VAMP3-202ENST00000470357 RASGRF1Q13972 1273 aa7.94□□□□□ -1.14
VAMP3-202ENST00000470357 MCMDC2Q4G0Z9 681 aa7.94□□□□□ -1.14
VAMP3-202ENST00000470357 CWC27Q6UX04 472 aaKnown RBP7.94□□□□□ -1.14
VAMP3-202ENST00000470357 TRIM46Q7Z4K8 759 aa7.94□□□□□ -1.14
VAMP3-202ENST00000470357 SAPCD2Q86UD0 394 aa7.94□□□□□ -1.14
VAMP3-202ENST00000470357 SLC51AQ86UW1 340 aa7.94□□□□□ -1.14
VAMP3-202ENST00000470357 TBC1D16Q8TBP0 767 aa7.94□□□□□ -1.14
VAMP3-202ENST00000470357 WDR66Q8TBY9 1149 aa7.94□□□□□ -1.14
VAMP3-202ENST00000470357 TBC1D32Q96NH3 1257 aa7.94□□□□□ -1.14
VAMP3-202ENST00000470357 C22orf23Q9BZE7 217 aa7.94□□□□□ -1.14
VAMP3-202ENST00000470357 ZC3H12CQ9C0D7 883 aaKnown RBP7.94□□□□□ -1.14
VAMP3-202ENST00000470357 COA1Q9GZY4 146 aa7.94□□□□□ -1.14
VAMP3-202ENST00000470357 VPS33BQ9H267 617 aa7.94□□□□□ -1.14
VAMP3-202ENST00000470357 RBM19Q9Y4C8 960 aaKnown RBP7.94□□□□□ -1.14
VAMP3-202ENST00000470357 IDH1O75874 414 aaKnown RBP7.93□□□□□ -1.14
VAMP3-202ENST00000470357 CYP2E1P05181 493 aaPredicted RBP7.93□□□□□ -1.14
VAMP3-202ENST00000470357 IL1R1P14778 569 aa7.93□□□□□ -1.14
VAMP3-202ENST00000470357 RBM25P49756 843 aaKnown RBP7.93□□□□□ -1.14
VAMP3-202ENST00000470357 DHX9Q08211 1270 aaKnown RBP7.93□□□□□ -1.14
VAMP3-202ENST00000470357 NMIQ13287 307 aaPredicted RBP7.93□□□□□ -1.14
VAMP3-202ENST00000470357 SCARF1Q14162 830 aa7.93□□□□□ -1.14
VAMP3-202ENST00000470357 UBE3CQ15386 1083 aa7.93□□□□□ -1.14
VAMP3-202ENST00000470357 USP50Q70EL3 339 aaPredicted RBP7.93□□□□□ -1.14
VAMP3-202ENST00000470357 TDRD7Q8NHU6 1098 aaKnown RBP7.93□□□□□ -1.14
VAMP3-202ENST00000470357 TBC1D22AQ8WUA7 517 aa7.93□□□□□ -1.14
VAMP3-202ENST00000470357 APPBP2Q92624 585 aa7.93□□□□□ -1.14
VAMP3-202ENST00000470357 ZIC5Q96T25 663 aa7.93□□□□□ -1.14
VAMP3-202ENST00000470357 RTFDC1Q9BY42 306 aaPredicted RBP7.93□□□□□ -1.14
VAMP3-202ENST00000470357 ANO2Q9NQ90 1003 aa7.93□□□□□ -1.14
VAMP3-202ENST00000470357 TMPRSS4Q9NRS4 437 aa7.93□□□□□ -1.14
VAMP3-202ENST00000470357 LRP2BPQ9P2M1 347 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms