RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 GLTPD2A6NH11 291 aa17.67■□□□□ 0.42
COL4A5-203ENST00000470339 GOLGA8AA7E2F4 631 aa17.67■□□□□ 0.42
COL4A5-203ENST00000470339 CPLX1O14810 134 aa17.67■□□□□ 0.42
COL4A5-203ENST00000470339 CTDNEP1O95476 244 aa17.67■□□□□ 0.42
COL4A5-203ENST00000470339 AKR1B1P15121 316 aa17.67■□□□□ 0.42
COL4A5-203ENST00000470339 TROAPQ12815 778 aa17.67■□□□□ 0.42
COL4A5-203ENST00000470339 MICU3Q86XE3 530 aa17.67■□□□□ 0.42
COL4A5-203ENST00000470339 TRPM4Q8TD43 1214 aa17.67■□□□□ 0.42
COL4A5-203ENST00000470339 HOOK2Q96ED9 719 aa17.67■□□□□ 0.42
COL4A5-203ENST00000470339 TMEM39BQ9GZU3 492 aa17.67■□□□□ 0.42
COL4A5-203ENST00000470339 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.67■□□□□ 0.42
COL4A5-203ENST00000470339 NCOA5Q9HCD5 579 aaKnown RBP17.67■□□□□ 0.42
COL4A5-203ENST00000470339 RBM28Q9NW13 759 aaKnown RBP17.67■□□□□ 0.42
COL4A5-203ENST00000470339 MTMR4Q9NYA4 1195 aa17.67■□□□□ 0.42
COL4A5-203ENST00000470339 PPP2R3BQ9Y5P8 575 aa17.67■□□□□ 0.42
COL4A5-203ENST00000470339 TOP1P11387 765 aaKnown RBP17.66■□□□□ 0.42
COL4A5-203ENST00000470339 RTN1Q16799 776 aa17.66■□□□□ 0.42
COL4A5-203ENST00000470339 RGS22Q8NE09 1264 aa17.66■□□□□ 0.42
COL4A5-203ENST00000470339 CEP95Q96GE4 821 aa17.66■□□□□ 0.42
COL4A5-203ENST00000470339 TEPSINQ96N21 525 aa17.66■□□□□ 0.42
COL4A5-203ENST00000470339 DEFB129Q9H1M3 183 aa17.66■□□□□ 0.42
COL4A5-203ENST00000470339 FAM217BQ9NTX9 383 aaPredicted RBP17.66■□□□□ 0.42
COL4A5-203ENST00000470339 MYH6P13533 1939 aa17.66■□□□□ 0.42
COL4A5-203ENST00000470339 ADD1P35611 737 aaKnown RBP17.65■□□□□ 0.42
COL4A5-203ENST00000470339 HIRAP54198 1017 aaPredicted RBP17.65■□□□□ 0.42
COL4A5-203ENST00000470339 RAB3GAP1Q15042 981 aa17.65■□□□□ 0.42
COL4A5-203ENST00000470339 TMEM179Q6ZVK1 233 aa17.65■□□□□ 0.42
COL4A5-203ENST00000470339 PNMA1Q8ND90 353 aa17.65■□□□□ 0.42
COL4A5-203ENST00000470339 TMEM47Q9BQJ4 181 aa17.65■□□□□ 0.42
COL4A5-203ENST00000470339 KANSL2Q9H9L4 492 aa17.65■□□□□ 0.42
COL4A5-203ENST00000470339 STX8Q9UNK0 236 aa17.65■□□□□ 0.42
COL4A5-203ENST00000470339 WDR90Q96KV7 1748 aa17.64■□□□□ 0.41
COL4A5-203ENST00000470339 PTPDC1A2A3K4 754 aa17.64■□□□□ 0.41
COL4A5-203ENST00000470339 TTLL1O95922 423 aa17.64■□□□□ 0.41
COL4A5-203ENST00000470339 IFNAR1P17181 557 aa17.64■□□□□ 0.41
COL4A5-203ENST00000470339 CDC27P30260 824 aa17.64■□□□□ 0.41
COL4A5-203ENST00000470339 KIF5BP33176 963 aa17.64■□□□□ 0.41
COL4A5-203ENST00000470339 NTRK3Q16288 839 aa17.64■□□□□ 0.41
COL4A5-203ENST00000470339 ABCB5Q2M3G0 1257 aa17.64■□□□□ 0.41
COL4A5-203ENST00000470339 ANGEL2Q5VTE6 544 aaKnown RBP17.64■□□□□ 0.41
COL4A5-203ENST00000470339 USP50Q70EL3 339 aaPredicted RBP17.64■□□□□ 0.41
COL4A5-203ENST00000470339 MKL1Q969V6 931 aa17.64■□□□□ 0.41
COL4A5-203ENST00000470339 MYL10Q9BUA6 226 aa17.64■□□□□ 0.41
COL4A5-203ENST00000470339 GINM1Q9NU53 330 aa17.64■□□□□ 0.41
COL4A5-203ENST00000470339 SYNPO2Q9UMS6 1093 aa17.64■□□□□ 0.41
COL4A5-203ENST00000470339 ASTN2O75129 1339 aaPredicted RBP17.64■□□□□ 0.41
COL4A5-203ENST00000470339 WDR33Q9C0J8 1336 aaKnown RBP17.64■□□□□ 0.41
COL4A5-203ENST00000470339 JAK2O60674 1132 aa17.63■□□□□ 0.41
COL4A5-203ENST00000470339 SYT1P21579 422 aa17.63■□□□□ 0.41
COL4A5-203ENST00000470339 FAM184AQ8NB25 1140 aa17.63■□□□□ 0.41
COL4A5-203ENST00000470339 CTCFLQ8NI51 663 aaPredicted RBP17.63■□□□□ 0.41
COL4A5-203ENST00000470339 ZC3H15Q8WU90 426 aaKnown RBP17.63■□□□□ 0.41
COL4A5-203ENST00000470339 NUP133Q8WUM0 1156 aa17.63■□□□□ 0.41
COL4A5-203ENST00000470339 CABP5Q9NP86 173 aa17.63■□□□□ 0.41
COL4A5-203ENST00000470339 NYAP2Q9P242 653 aa17.63■□□□□ 0.41
COL4A5-203ENST00000470339 STK36Q9NRP7 1315 aa17.63■□□□□ 0.41
COL4A5-203ENST00000470339 IQCA1LA6NCM1 817 aa17.62■□□□□ 0.41
COL4A5-203ENST00000470339 FAM196BA6NMK8 535 aa17.62■□□□□ 0.41
COL4A5-203ENST00000470339 MPHOSPH10O00566 681 aaKnown RBP17.62■□□□□ 0.41
COL4A5-203ENST00000470339 STX6O43752 255 aa17.62■□□□□ 0.41
COL4A5-203ENST00000470339 BRD1O95696 1058 aa17.62■□□□□ 0.41
COL4A5-203ENST00000470339 RXRAP19793 462 aa17.62■□□□□ 0.41
COL4A5-203ENST00000470339 GNAQP50148 359 aa17.62■□□□□ 0.41
COL4A5-203ENST00000470339 LARP1BQ659C4 914 aaKnown RBP17.62■□□□□ 0.41
COL4A5-203ENST00000470339 DCAF15Q66K64 600 aa17.62■□□□□ 0.41
COL4A5-203ENST00000470339 RAB11FIP4Q86YS3 637 aa17.62■□□□□ 0.41
COL4A5-203ENST00000470339 GGA3Q9NZ52 723 aa17.62■□□□□ 0.41
COL4A5-203ENST00000470339 ATAD5Q96QE3 1844 aa17.62■□□□□ 0.41
COL4A5-203ENST00000470339 SLURP2P0DP57 97 aa17.61■□□□□ 0.41
COL4A5-203ENST00000470339 FDPSP14324 419 aaKnown RBP17.61■□□□□ 0.41
COL4A5-203ENST00000470339 SSRP1Q08945 709 aaKnown RBP17.61■□□□□ 0.41
COL4A5-203ENST00000470339 GRM4Q14833 912 aa17.61■□□□□ 0.41
COL4A5-203ENST00000470339 CCDC144CPQ8IYA2 1237 aa17.61■□□□□ 0.41
COL4A5-203ENST00000470339 LZTS2Q9BRK4 669 aa17.61■□□□□ 0.41
COL4A5-203ENST00000470339 ORC3Q9UBD5 711 aaPredicted RBP17.61■□□□□ 0.41
COL4A5-203ENST00000470339 CLIP2Q9UDT6 1046 aa17.61■□□□□ 0.41
COL4A5-203ENST00000470339 FMNL1O95466 1100 aaPredicted RBP17.6■□□□□ 0.41
COL4A5-203ENST00000470339 SMARCA1P28370 1054 aa17.6■□□□□ 0.41
COL4A5-203ENST00000470339 GUCY1A2P33402 732 aa17.6■□□□□ 0.41
COL4A5-203ENST00000470339 EPHX2P34913 555 aa17.6■□□□□ 0.41
COL4A5-203ENST00000470339 CAP2P40123 477 aa17.6■□□□□ 0.41
COL4A5-203ENST00000470339 CLEC17AQ6ZS10 378 aa17.6■□□□□ 0.41
COL4A5-203ENST00000470339 CDAN1Q8IWY9 1227 aa17.6■□□□□ 0.41
COL4A5-203ENST00000470339 TRIM22Q8IYM9 498 aa17.6■□□□□ 0.41
COL4A5-203ENST00000470339 WASF1Q92558 559 aa17.6■□□□□ 0.41
COL4A5-203ENST00000470339 DCPSQ96C86 337 aaKnown RBP17.6■□□□□ 0.41
COL4A5-203ENST00000470339 DDX11Q96FC9 970 aa17.6■□□□□ 0.41
COL4A5-203ENST00000470339 RNF26Q9BY78 433 aaPredicted RBP17.6■□□□□ 0.41
COL4A5-203ENST00000470339 ZDHHC9Q9Y397 364 aa17.6■□□□□ 0.41
COL4A5-203ENST00000470339 PALM3A6NDB9 673 aaPredicted RBP17.59■□□□□ 0.41
COL4A5-203ENST00000470339 PHF20L1A8MW92 1017 aa17.59■□□□□ 0.41
COL4A5-203ENST00000470339 GH2P01242 217 aa17.59■□□□□ 0.41
COL4A5-203ENST00000470339 ZSCAN22P10073 491 aaPredicted RBP17.59■□□□□ 0.41
COL4A5-203ENST00000470339 FUT2Q10981 343 aa17.59■□□□□ 0.41
COL4A5-203ENST00000470339 PKP1Q13835 747 aa17.59■□□□□ 0.41
COL4A5-203ENST00000470339 RRP1BQ14684 758 aaKnown RBP17.59■□□□□ 0.41
COL4A5-203ENST00000470339 SEPT2Q15019 361 aa17.59■□□□□ 0.41
COL4A5-203ENST00000470339 SUPT20HL1Q3ZLR7 823 aa17.59■□□□□ 0.41
COL4A5-203ENST00000470339 TMTC3Q6ZXV5 915 aa17.59■□□□□ 0.41
COL4A5-203ENST00000470339 MIGA2Q7L4E1 593 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms