RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 EMILIN3Q9NT22 766 aa11.23□□□□□ -0.61
CCDC171-204ENST00000470191 DDX20Q9UHI6 824 aaKnown RBP11.23□□□□□ -0.61
CCDC171-204ENST00000470191 ZBTB21Q9ULJ3 1066 aa11.23□□□□□ -0.61
CCDC171-204ENST00000470191 NOB1Q9ULX3 412 aaKnown RBP11.23□□□□□ -0.61
CCDC171-204ENST00000470191 CNMDO75829 334 aa11.22□□□□□ -0.61
CCDC171-204ENST00000470191 GLRX3O76003 335 aaKnown RBP11.22□□□□□ -0.61
CCDC171-204ENST00000470191 MAP4K4O95819 1239 aaPredicted RBP11.22□□□□□ -0.61
CCDC171-204ENST00000470191 FLT1P17948 1338 aa11.22□□□□□ -0.61
CCDC171-204ENST00000470191 LAMA2P24043 3122 aaKnown RBP11.22□□□□□ -0.61
CCDC171-204ENST00000470191 EYSQ5T1H1 3165 aa11.22□□□□□ -0.61
CCDC171-204ENST00000470191 USP17L2Q6R6M4 530 aa11.22□□□□□ -0.61
CCDC171-204ENST00000470191 NPLOC4Q8TAT6 608 aa11.22□□□□□ -0.61
CCDC171-204ENST00000470191 BADQ92934 168 aa11.22□□□□□ -0.61
CCDC171-204ENST00000470191 ZNF521Q96K83 1311 aa11.22□□□□□ -0.61
CCDC171-204ENST00000470191 DHX36Q9H2U1 1008 aaKnown RBP11.22□□□□□ -0.61
CCDC171-204ENST00000470191 IVNS1ABPQ9Y6Y0 642 aa11.22□□□□□ -0.61
CCDC171-204ENST00000470191 E9PSI1 815 aa11.21□□□□□ -0.61
CCDC171-204ENST00000470191 BAG3O95817 575 aa11.21□□□□□ -0.61
CCDC171-204ENST00000470191 GH2P01242 217 aa11.21□□□□□ -0.61
CCDC171-204ENST00000470191 FOSL2P15408 326 aa11.21□□□□□ -0.61
CCDC171-204ENST00000470191 PTPREP23469 700 aa11.21□□□□□ -0.61
CCDC171-204ENST00000470191 ARID4AP29374 1257 aaPredicted RBP11.21□□□□□ -0.61
CCDC171-204ENST00000470191 DYNLL1P63167 89 aaKnown RBP11.21□□□□□ -0.61
CCDC171-204ENST00000470191 CCNA1P78396 465 aa11.21□□□□□ -0.61
CCDC171-204ENST00000470191 RAB3GAP1Q15042 981 aa11.21□□□□□ -0.61
CCDC171-204ENST00000470191 ALDH1L2Q3SY69 923 aa11.21□□□□□ -0.61
CCDC171-204ENST00000470191 ADGRA1Q86SQ6 560 aa11.21□□□□□ -0.61
CCDC171-204ENST00000470191 TRPV1Q8NER1 839 aa11.21□□□□□ -0.61
CCDC171-204ENST00000470191 LPAR1Q92633 364 aa11.21□□□□□ -0.61
CCDC171-204ENST00000470191 FERMT2Q96AC1 680 aa11.21□□□□□ -0.61
CCDC171-204ENST00000470191 CDCA7LQ96GN5 454 aa11.21□□□□□ -0.61
CCDC171-204ENST00000470191 PRDM6Q9NQX0 595 aa11.21□□□□□ -0.61
CCDC171-204ENST00000470191 HDAC5Q9UQL6 1122 aa11.21□□□□□ -0.61
CCDC171-204ENST00000470191 RABGAP1Q9Y3P9 1069 aa11.21□□□□□ -0.61
CCDC171-204ENST00000470191 ZNFX1Q9P2E3 1918 aaKnown RBP11.21□□□□□ -0.62
CCDC171-204ENST00000470191 SLC15A5A6NIM6 579 aa11.2□□□□□ -0.62
CCDC171-204ENST00000470191 USP17L15C9J2P7 530 aa11.2□□□□□ -0.62
CCDC171-204ENST00000470191 USP17L13C9JLJ4 530 aa11.2□□□□□ -0.62
CCDC171-204ENST00000470191 KBTBD13C9JR72 458 aa11.2□□□□□ -0.62
CCDC171-204ENST00000470191 USP17L11C9JVI0 530 aa11.2□□□□□ -0.62
CCDC171-204ENST00000470191 USP17L18D6R9N7 530 aa11.2□□□□□ -0.62
CCDC171-204ENST00000470191 USP17L22D6RA61 530 aa11.2□□□□□ -0.62
CCDC171-204ENST00000470191 USP17L17D6RBQ6 530 aa11.2□□□□□ -0.62
CCDC171-204ENST00000470191 USP17L19D6RCP7 530 aa11.2□□□□□ -0.62
CCDC171-204ENST00000470191 USP17L20D6RJB6 530 aa11.2□□□□□ -0.62
CCDC171-204ENST00000470191 DNM1LO00429 736 aa11.2□□□□□ -0.62
CCDC171-204ENST00000470191 HLA-DOAP06340 250 aa11.2□□□□□ -0.62
CCDC171-204ENST00000470191 USP17L24Q0WX57 530 aa11.2□□□□□ -0.62
CCDC171-204ENST00000470191 TRIM60Q495X7 471 aa11.2□□□□□ -0.62
CCDC171-204ENST00000470191 TTC39AQ5SRH9 613 aa11.2□□□□□ -0.62
CCDC171-204ENST00000470191 SLC39A5Q6ZMH5 540 aa11.2□□□□□ -0.62
CCDC171-204ENST00000470191 FOXP4Q8IVH2 680 aaPredicted RBP11.2□□□□□ -0.62
CCDC171-204ENST00000470191 GTF3C2Q8WUA4 911 aaPredicted RBP11.2□□□□□ -0.62
CCDC171-204ENST00000470191 TTYH1Q9H313 450 aaPredicted RBP11.2□□□□□ -0.62
CCDC171-204ENST00000470191 BTBD7Q9P203 1132 aa11.2□□□□□ -0.62
CCDC171-204ENST00000470191 UQCRFS1P1P0C7P4 283 aa11.19□□□□□ -0.62
CCDC171-204ENST00000470191 PLCG2P16885 1265 aa11.19□□□□□ -0.62
CCDC171-204ENST00000470191 ADCYAP1R1P41586 468 aa11.19□□□□□ -0.62
CCDC171-204ENST00000470191 SLFN5Q08AF3 891 aa11.19□□□□□ -0.62
CCDC171-204ENST00000470191 G3BP1Q13283 466 aaKnown RBP eCLIP11.19□□□□□ -0.62
CCDC171-204ENST00000470191 PRAMEF19Q5SWL8 479 aa11.19□□□□□ -0.62
CCDC171-204ENST00000470191 SH3RF1Q7Z6J0 888 aa11.19□□□□□ -0.62
CCDC171-204ENST00000470191 DPP9Q86TI2 863 aa11.19□□□□□ -0.62
CCDC171-204ENST00000470191 MYH8P13535 1937 aa11.19□□□□□ -0.62
CCDC171-204ENST00000470191 MSCO60682 206 aa11.18□□□□□ -0.62
CCDC171-204ENST00000470191 MKRN4PQ13434 485 aaPredicted RBP11.18□□□□□ -0.62
CCDC171-204ENST00000470191 CATSPERGQ6ZRH7 1159 aa11.18□□□□□ -0.62
CCDC171-204ENST00000470191 MIGA1Q8NAN2 632 aa11.18□□□□□ -0.62
CCDC171-204ENST00000470191 ARRDC4Q8NCT1 418 aa11.18□□□□□ -0.62
CCDC171-204ENST00000470191 ACER1Q8TDN7 264 aa11.18□□□□□ -0.62
CCDC171-204ENST00000470191 API5Q9BZZ5 524 aaKnown RBP11.18□□□□□ -0.62
CCDC171-204ENST00000470191 RPAP3Q9H6T3 665 aaPredicted RBP11.18□□□□□ -0.62
CCDC171-204ENST00000470191 NAV1Q8NEY1 1877 aa11.18□□□□□ -0.62
CCDC171-204ENST00000470191 COL11A1P12107 1806 aaPredicted RBP11.18□□□□□ -0.62
CCDC171-204ENST00000470191 SMCHD1A6NHR9 2005 aa11.18□□□□□ -0.62
CCDC171-204ENST00000470191 PLXNA1Q9UIW2 1896 aa11.17□□□□□ -0.62
CCDC171-204ENST00000470191 PNMA6EA0A0J9YXQ4 647 aa11.17□□□□□ -0.62
CCDC171-204ENST00000470191 TRIM43BA6NCK2 446 aa11.17□□□□□ -0.62
CCDC171-204ENST00000470191 CYP2E1P05181 493 aaPredicted RBP11.17□□□□□ -0.62
CCDC171-204ENST00000470191 GNAI3P08754 354 aa11.17□□□□□ -0.62
CCDC171-204ENST00000470191 CYBAP13498 195 aa11.17□□□□□ -0.62
CCDC171-204ENST00000470191 VCAM1P19320 739 aa11.17□□□□□ -0.62
CCDC171-204ENST00000470191 CYP7A1P22680 504 aa11.17□□□□□ -0.62
CCDC171-204ENST00000470191 ADORA2AP29274 412 aa11.17□□□□□ -0.62
CCDC171-204ENST00000470191 ZAP70P43403 619 aa11.17□□□□□ -0.62
CCDC171-204ENST00000470191 USP5P45974 858 aa11.17□□□□□ -0.62
CCDC171-204ENST00000470191 GRB14Q14449 540 aa11.17□□□□□ -0.62
CCDC171-204ENST00000470191 PLS1Q14651 629 aa11.17□□□□□ -0.62
CCDC171-204ENST00000470191 ATF7IPQ6VMQ6 1270 aa11.17□□□□□ -0.62
CCDC171-204ENST00000470191 METTL16Q86W50 562 aaKnown RBP11.17□□□□□ -0.62
CCDC171-204ENST00000470191 PPM1EQ8WY54 764 aa11.17□□□□□ -0.62
CCDC171-204ENST00000470191 TRIM43Q96BQ3 446 aaPredicted RBP11.17□□□□□ -0.62
CCDC171-204ENST00000470191 RNPC3Q96LT9 517 aaKnown RBP11.17□□□□□ -0.62
CCDC171-204ENST00000470191 DBNDD2Q9BQY9 259 aa11.17□□□□□ -0.62
CCDC171-204ENST00000470191 PIH1D3Q9NQM4 214 aaKnown RBP11.17□□□□□ -0.62
CCDC171-204ENST00000470191 PDLIM7Q9NR12 457 aa11.17□□□□□ -0.62
CCDC171-204ENST00000470191 GINM1Q9NU53 330 aa11.17□□□□□ -0.62
CCDC171-204ENST00000470191 RAPGEFL1Q9UHV5 662 aa11.17□□□□□ -0.62
CCDC171-204ENST00000470191 ZNF236Q9UL36 1845 aa11.16□□□□□ -0.62
CCDC171-204ENST00000470191 POTEMA6NI47 508 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms