RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 CCDC74BQ96LY2 380 aa6.52□□□□□ -1.37
BRCA2-202ENST00000470094 TGIF2Q9GZN2 237 aa6.52□□□□□ -1.37
BRCA2-202ENST00000470094 CCSER2Q9H7U1 834 aa6.52□□□□□ -1.37
BRCA2-202ENST00000470094 CEP131Q9UPN4 1083 aa6.52□□□□□ -1.37
BRCA2-202ENST00000470094 SLC22A31A6NKX4 558 aa6.51□□□□□ -1.37
BRCA2-202ENST00000470094 FAM155AB1AL88 458 aaPredicted RBP6.51□□□□□ -1.37
BRCA2-202ENST00000470094 CBX7O95931 251 aa6.51□□□□□ -1.37
BRCA2-202ENST00000470094 RAG1P15918 1043 aa6.51□□□□□ -1.37
BRCA2-202ENST00000470094 KIR3DL1P43629 444 aa6.51□□□□□ -1.37
BRCA2-202ENST00000470094 CHMP4BP1P59074 171 aa6.51□□□□□ -1.37
BRCA2-202ENST00000470094 LRRFIP1Q32MZ4 808 aaKnown RBP6.51□□□□□ -1.37
BRCA2-202ENST00000470094 ARSHQ5FYA8 562 aa6.51□□□□□ -1.37
BRCA2-202ENST00000470094 OVOS1Q6IE37 1185 aa6.51□□□□□ -1.37
BRCA2-202ENST00000470094 FLCNQ8NFG4 579 aa6.51□□□□□ -1.37
BRCA2-202ENST00000470094 GPRASP2Q96D09 838 aa6.51□□□□□ -1.37
BRCA2-202ENST00000470094 HRASLS5Q96KN8 279 aa6.51□□□□□ -1.37
BRCA2-202ENST00000470094 TNKS2Q9H2K2 1166 aa6.51□□□□□ -1.37
BRCA2-202ENST00000470094 PLAGL2Q9UPG8 496 aa6.51□□□□□ -1.37
BRCA2-202ENST00000470094 SLC5A6Q9Y289 635 aa6.51□□□□□ -1.37
BRCA2-202ENST00000470094 CNTNAP4Q9C0A0 1308 aa6.5□□□□□ -1.37
BRCA2-202ENST00000470094 ADAMTS4O75173 837 aa6.5□□□□□ -1.37
BRCA2-202ENST00000470094 ZNF865P0CJ78 1059 aaPredicted RBP6.5□□□□□ -1.37
BRCA2-202ENST00000470094 IMPDH2P12268 514 aa6.5□□□□□ -1.37
BRCA2-202ENST00000470094 ERCC5P28715 1186 aaPredicted RBP6.5□□□□□ -1.37
BRCA2-202ENST00000470094 CLCN7P51798 805 aa6.5□□□□□ -1.37
BRCA2-202ENST00000470094 PRKCQQ04759 706 aa6.5□□□□□ -1.37
BRCA2-202ENST00000470094 RAD51AP2Q09MP3 1159 aa6.5□□□□□ -1.37
BRCA2-202ENST00000470094 COL9A2Q14055 689 aaPredicted RBP6.5□□□□□ -1.37
BRCA2-202ENST00000470094 SPACA3Q8IXA5 215 aa6.5□□□□□ -1.37
BRCA2-202ENST00000470094 PPP1R13LQ8WUF5 828 aa6.5□□□□□ -1.37
BRCA2-202ENST00000470094 BCL7CQ8WUZ0 217 aaPredicted RBP6.5□□□□□ -1.37
BRCA2-202ENST00000470094 TMEM40Q8WWA1 233 aa6.5□□□□□ -1.37
BRCA2-202ENST00000470094 FBXL18Q96ME1 805 aa6.5□□□□□ -1.37
BRCA2-202ENST00000470094 FERD3LQ96RJ6 166 aa6.5□□□□□ -1.37
BRCA2-202ENST00000470094 VAV3Q9UKW4 847 aa6.5□□□□□ -1.37
BRCA2-202ENST00000470094 SNX11Q9Y5W9 270 aa6.5□□□□□ -1.37
BRCA2-202ENST00000470094 PRR33A8MZF0 331 aa6.49□□□□□ -1.37
BRCA2-202ENST00000470094 RGS13O14921 159 aa6.49□□□□□ -1.37
BRCA2-202ENST00000470094 GBP1P32455 592 aa6.49□□□□□ -1.37
BRCA2-202ENST00000470094 GP2P55259 537 aaKnown RBP6.49□□□□□ -1.37
BRCA2-202ENST00000470094 AOC3Q16853 763 aa6.49□□□□□ -1.37
BRCA2-202ENST00000470094 NKPD1Q17RQ9 610 aa6.49□□□□□ -1.37
BRCA2-202ENST00000470094 FBXW10Q5XX13 1052 aa6.49□□□□□ -1.37
BRCA2-202ENST00000470094 NLRC3Q7RTR2 1065 aa6.49□□□□□ -1.37
BRCA2-202ENST00000470094 BAHD1Q8TBE0 780 aaPredicted RBP6.49□□□□□ -1.37
BRCA2-202ENST00000470094 KIF2CQ99661 725 aa6.49□□□□□ -1.37
BRCA2-202ENST00000470094 ACBD3Q9H3P7 528 aa6.49□□□□□ -1.37
BRCA2-202ENST00000470094 CNNM2Q9H8M5 875 aa6.49□□□□□ -1.37
BRCA2-202ENST00000470094 ZNRF3Q9ULT6 936 aa6.49□□□□□ -1.37
BRCA2-202ENST00000470094 INPP5FQ9Y2H2 1132 aa6.49□□□□□ -1.37
BRCA2-202ENST00000470094 CAPN6Q9Y6Q1 641 aa6.49□□□□□ -1.37
BRCA2-202ENST00000470094 MEIS3P2A8K0S8 358 aa6.48□□□□□ -1.37
BRCA2-202ENST00000470094 GJA8P48165 433 aa6.48□□□□□ -1.37
BRCA2-202ENST00000470094 CDKAL1Q5VV42 579 aa6.48□□□□□ -1.37
BRCA2-202ENST00000470094 CDCP2Q5VXM1 449 aa6.48□□□□□ -1.37
BRCA2-202ENST00000470094 TP53INP2Q8IXH6 220 aa6.48□□□□□ -1.37
BRCA2-202ENST00000470094 RASGRP4Q8TDF6 673 aa6.48□□□□□ -1.37
BRCA2-202ENST00000470094 RNF141Q8WVD5 230 aa6.48□□□□□ -1.37
BRCA2-202ENST00000470094 ATG4CQ96DT6 458 aa6.48□□□□□ -1.37
BRCA2-202ENST00000470094 ANTXR1Q9H6X2 564 aa6.48□□□□□ -1.37
BRCA2-202ENST00000470094 PPT2Q9UMR5 302 aa6.48□□□□□ -1.37
BRCA2-202ENST00000470094 EFR3BQ9Y2G0 817 aa6.48□□□□□ -1.37
BRCA2-202ENST00000470094 BNIP3Q12983 259 aa6.47□□□□□ -1.37
BRCA2-202ENST00000470094 ZNF574Q6ZN55 896 aaPredicted RBP6.47□□□□□ -1.37
BRCA2-202ENST00000470094 AGBL5Q8NDL9 886 aa6.47□□□□□ -1.37
BRCA2-202ENST00000470094 PIWIL2Q8TC59 973 aaKnown RBP6.47□□□□□ -1.37
BRCA2-202ENST00000470094 ASB11Q8WXH4 323 aa6.47□□□□□ -1.37
BRCA2-202ENST00000470094 KREMEN1Q96MU8 473 aa6.47□□□□□ -1.37
BRCA2-202ENST00000470094 ASPNQ9BXN1 380 aa6.47□□□□□ -1.37
BRCA2-202ENST00000470094 PAK6Q9NQU5 681 aaPredicted RBP6.47□□□□□ -1.37
BRCA2-202ENST00000470094 GINM1Q9NU53 330 aa6.47□□□□□ -1.37
BRCA2-202ENST00000470094 KCNH3Q9ULD8 1083 aa6.47□□□□□ -1.37
BRCA2-202ENST00000470094 H3BS24 57 aa6.46□□□□□ -1.38
BRCA2-202ENST00000470094 NME1P15531 152 aaKnown RBP6.46□□□□□ -1.38
BRCA2-202ENST00000470094 POLR2BP30876 1174 aaKnown RBP6.46□□□□□ -1.38
BRCA2-202ENST00000470094 CCNFP41002 786 aa6.46□□□□□ -1.38
BRCA2-202ENST00000470094 SOX9P48436 509 aa6.46□□□□□ -1.38
BRCA2-202ENST00000470094 TNK2Q07912 1038 aa6.46□□□□□ -1.38
BRCA2-202ENST00000470094 NFXL1Q6ZNB6 911 aa6.46□□□□□ -1.38
BRCA2-202ENST00000470094 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.46□□□□□ -1.38
BRCA2-202ENST00000470094 OAS3Q9Y6K5 1087 aaKnown RBP6.46□□□□□ -1.38
BRCA2-202ENST00000470094 PITPNM2Q9BZ72 1349 aa6.46□□□□□ -1.38
BRCA2-202ENST00000470094 TNFRSF10CO14798 259 aa6.45□□□□□ -1.38
BRCA2-202ENST00000470094 UBOX5O94941 541 aa6.45□□□□□ -1.38
BRCA2-202ENST00000470094 CD8BP10966 210 aa6.45□□□□□ -1.38
BRCA2-202ENST00000470094 CD96P40200 585 aa6.45□□□□□ -1.38
BRCA2-202ENST00000470094 RNF4P78317 190 aa6.45□□□□□ -1.38
BRCA2-202ENST00000470094 IKZF1Q13422 519 aa6.45□□□□□ -1.38
BRCA2-202ENST00000470094 ANGEL2Q5VTE6 544 aaKnown RBP6.45□□□□□ -1.38
BRCA2-202ENST00000470094 CCDC81Q6ZN84 652 aa6.45□□□□□ -1.38
BRCA2-202ENST00000470094 SPRED2Q7Z698 418 aa6.45□□□□□ -1.38
BRCA2-202ENST00000470094 Q96M66 194 aa6.45□□□□□ -1.38
BRCA2-202ENST00000470094 HSPA12BQ96MM6 686 aa6.45□□□□□ -1.38
BRCA2-202ENST00000470094 CRBNQ96SW2 442 aa6.45□□□□□ -1.38
BRCA2-202ENST00000470094 ST14Q9Y5Y6 855 aa6.45□□□□□ -1.38
BRCA2-202ENST00000470094 NASPP49321 788 aaPredicted RBP6.44□□□□□ -1.38
BRCA2-202ENST00000470094 GNL2Q13823 731 aaKnown RBP6.44□□□□□ -1.38
BRCA2-202ENST00000470094 PLCL1Q15111 1095 aa6.44□□□□□ -1.38
BRCA2-202ENST00000470094 THAP5Q7Z6K1 395 aa6.44□□□□□ -1.38
BRCA2-202ENST00000470094 WFDC3Q8IUB2 231 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms