RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 ATF7IPQ6VMQ6 1270 aa22.39■■□□□ 1.17
TTC28-205ENST00000469670 CDX2Q99626 313 aaPredicted RBP22.39■■□□□ 1.17
TTC28-205ENST00000469670 FEZ1Q99689 392 aa22.39■■□□□ 1.17
TTC28-205ENST00000469670 HOXC6P09630 235 aa22.38■■□□□ 1.17
TTC28-205ENST00000469670 TRMT2AQ8IZ69 625 aaKnown RBP22.38■■□□□ 1.17
TTC28-205ENST00000469670 MAST2Q6P0Q8 1798 aa22.38■■□□□ 1.17
TTC28-205ENST00000469670 CYP2C19P33261 490 aa22.37■■□□□ 1.17
TTC28-205ENST00000469670 GRB14Q14449 540 aa22.37■■□□□ 1.17
TTC28-205ENST00000469670 TTC39AQ5SRH9 613 aa22.37■■□□□ 1.17
TTC28-205ENST00000469670 CATSPERGQ6ZRH7 1159 aa22.37■■□□□ 1.17
TTC28-205ENST00000469670 NPLOC4Q8TAT6 608 aa22.37■■□□□ 1.17
TTC28-205ENST00000469670 ATP11BQ9Y2G3 1177 aa22.37■■□□□ 1.17
TTC28-205ENST00000469670 IVNS1ABPQ9Y6Y0 642 aa22.37■■□□□ 1.17
TTC28-205ENST00000469670 CYP2E1P05181 493 aaPredicted RBP22.36■■□□□ 1.17
TTC28-205ENST00000469670 USP14P54578 494 aa22.36■■□□□ 1.17
TTC28-205ENST00000469670 SHHQ15465 462 aa22.36■■□□□ 1.17
TTC28-205ENST00000469670 TRPV1Q8NER1 839 aa22.36■■□□□ 1.17
TTC28-205ENST00000469670 MAFAQ8NHW3 353 aaPredicted RBP22.36■■□□□ 1.17
TTC28-205ENST00000469670 SEMA6BQ9H3T3 888 aa22.36■■□□□ 1.17
TTC28-205ENST00000469670 BTBD7Q9P203 1132 aa22.36■■□□□ 1.17
TTC28-205ENST00000469670 LAMA2P24043 3122 aaKnown RBP22.35■■□□□ 1.17
TTC28-205ENST00000469670 DYNLL1P63167 89 aaKnown RBP22.35■■□□□ 1.17
TTC28-205ENST00000469670 GJC2Q5T442 439 aaPredicted RBP22.35■■□□□ 1.17
TTC28-205ENST00000469670 TATDN1Q6P1N9 297 aa22.35■■□□□ 1.17
TTC28-205ENST00000469670 LBX2Q6XYB7 198 aa22.35■■□□□ 1.17
TTC28-205ENST00000469670 FRMPD3Q5JV73 1810 aa22.35■■□□□ 1.17
TTC28-205ENST00000469670 VCANP13611 3396 aa22.35■■□□□ 1.17
TTC28-205ENST00000469670 PNMA6EA0A0J9YXQ4 647 aa22.34■■□□□ 1.17
TTC28-205ENST00000469670 VCAM1P19320 739 aa22.34■■□□□ 1.17
TTC28-205ENST00000469670 RAB3GAP1Q15042 981 aa22.34■■□□□ 1.17
TTC28-205ENST00000469670 CCDC158Q5M9N0 1113 aa22.34■■□□□ 1.17
TTC28-205ENST00000469670 C9orf50Q5SZB4 431 aa22.34■■□□□ 1.17
TTC28-205ENST00000469670 ARHGAP45Q92619 1136 aa22.34■■□□□ 1.17
TTC28-205ENST00000469670 KIAA1683Q9H0B3 1180 aa22.34■■□□□ 1.17
TTC28-205ENST00000469670 DNAH12Q6ZR08 3092 aa22.34■■□□□ 1.17
TTC28-205ENST00000469670 IGSF3O75054 1194 aa22.33■■□□□ 1.17
TTC28-205ENST00000469670 IGHA2P01877 340 aa22.33■■□□□ 1.17
TTC28-205ENST00000469670 GNAI2P04899 355 aa22.33■■□□□ 1.17
TTC28-205ENST00000469670 CYBAP13498 195 aa22.33■■□□□ 1.17
TTC28-205ENST00000469670 SLC39A5Q6ZMH5 540 aa22.33■■□□□ 1.17
TTC28-205ENST00000469670 ARRDC4Q8NCT1 418 aa22.33■■□□□ 1.17
TTC28-205ENST00000469670 DBNDD2Q9BQY9 259 aa22.33■■□□□ 1.17
TTC28-205ENST00000469670 PRDM5Q9NQX1 630 aaPredicted RBP22.33■■□□□ 1.17
TTC28-205ENST00000469670 SPDYE16A6NNV3 312 aaPredicted RBP22.32■■□□□ 1.16
TTC28-205ENST00000469670 TNNI3KQ59H18 835 aa22.32■■□□□ 1.16
TTC28-205ENST00000469670 ACER1Q8TDN7 264 aa22.32■■□□□ 1.16
TTC28-205ENST00000469670 MYLIPQ8WY64 445 aa22.32■■□□□ 1.16
TTC28-205ENST00000469670 GPR108Q9NPR9 543 aa22.32■■□□□ 1.16
TTC28-205ENST00000469670 PIH1D3Q9NQM4 214 aaKnown RBP22.32■■□□□ 1.16
TTC28-205ENST00000469670 SERPINB13Q9UIV8 391 aa22.32■■□□□ 1.16
TTC28-205ENST00000469670 FPGT-TNNI3KV9GXZ4 949 aa22.32■■□□□ 1.16
TTC28-205ENST00000469670 SPTBN5Q9NRC6 3674 aaKnown RBP22.31■■□□□ 1.16
TTC28-205ENST00000469670 KBTBD13C9JR72 458 aa22.31■■□□□ 1.16
TTC28-205ENST00000469670 CYP7A1P22680 504 aa22.31■■□□□ 1.16
TTC28-205ENST00000469670 ZAP70P43403 619 aa22.31■■□□□ 1.16
TTC28-205ENST00000469670 USP5P45974 858 aa22.31■■□□□ 1.16
TTC28-205ENST00000469670 RARSP54136 660 aaKnown RBP22.31■■□□□ 1.16
TTC28-205ENST00000469670 SMAD3P84022 425 aaKnown RBP22.31■■□□□ 1.16
TTC28-205ENST00000469670 DPP9Q86TI2 863 aa22.31■■□□□ 1.16
TTC28-205ENST00000469670 BADQ92934 168 aa22.31■■□□□ 1.16
TTC28-205ENST00000469670 RPAP3Q9H6T3 665 aaPredicted RBP22.31■■□□□ 1.16
TTC28-205ENST00000469670 LTBP2Q14767 1821 aa22.3■■□□□ 1.16
TTC28-205ENST00000469670 ABCB5Q2M3G0 1257 aa22.3■■□□□ 1.16
TTC28-205ENST00000469670 TRIM60Q495X7 471 aa22.3■■□□□ 1.16
TTC28-205ENST00000469670 CERKLQ49MI3 558 aaPredicted RBP22.3■■□□□ 1.16
TTC28-205ENST00000469670 ANO1Q5XXA6 986 aa22.3■■□□□ 1.16
TTC28-205ENST00000469670 OLFML2BQ68BL8 750 aa22.3■■□□□ 1.16
TTC28-205ENST00000469670 EHD4Q9H223 541 aa22.3■■□□□ 1.16
TTC28-205ENST00000469670 TTYH1Q9H313 450 aaPredicted RBP22.3■■□□□ 1.16
TTC28-205ENST00000469670 PRDM6Q9NQX0 595 aa22.3■■□□□ 1.16
TTC28-205ENST00000469670 FOCADQ5VW36 1801 aa22.29■■□□□ 1.16
TTC28-205ENST00000469670 ADORA2AP29274 412 aa22.29■■□□□ 1.16
TTC28-205ENST00000469670 SNX17Q15036 470 aa22.29■■□□□ 1.16
TTC28-205ENST00000469670 MIGA1Q8NAN2 632 aa22.29■■□□□ 1.16
TTC28-205ENST00000469670 ZNF512BQ96KM6 892 aaPredicted RBP22.29■■□□□ 1.16
TTC28-205ENST00000469670 CABP5Q9NP86 173 aa22.29■■□□□ 1.16
TTC28-205ENST00000469670 PDLIM7Q9NR12 457 aa22.29■■□□□ 1.16
TTC28-205ENST00000469670 EYSQ5T1H1 3165 aa22.29■■□□□ 1.16
TTC28-205ENST00000469670 CDK5RAP2Q96SN8 1893 aa22.28■■□□□ 1.16
TTC28-205ENST00000469670 ZNF316A6NFI3 1004 aaPredicted RBP22.28■■□□□ 1.16
TTC28-205ENST00000469670 SEPT4O43236 478 aa22.28■■□□□ 1.16
TTC28-205ENST00000469670 MYCNP04198 464 aaPredicted RBP22.28■■□□□ 1.16
TTC28-205ENST00000469670 FOSL2P15408 326 aa22.28■■□□□ 1.16
TTC28-205ENST00000469670 TTC6Q86TZ1 520 aa22.28■■□□□ 1.16
TTC28-205ENST00000469670 MOV10L1Q9BXT6 1211 aaKnown RBP22.28■■□□□ 1.16
TTC28-205ENST00000469670 STRNO43815 780 aa22.27■■□□□ 1.16
TTC28-205ENST00000469670 OS9Q13438 667 aaPredicted RBP22.27■■□□□ 1.16
TTC28-205ENST00000469670 SH3RF1Q7Z6J0 888 aa22.27■■□□□ 1.16
TTC28-205ENST00000469670 CERS3Q8IU89 383 aa22.27■■□□□ 1.16
TTC28-205ENST00000469670 TRIM43BA6NCK2 446 aa22.26■■□□□ 1.15
TTC28-205ENST00000469670 IDH1O75874 414 aaKnown RBP22.26■■□□□ 1.15
TTC28-205ENST00000469670 ADCYAP1R1P41586 468 aa22.26■■□□□ 1.15
TTC28-205ENST00000469670 TRIM43Q96BQ3 446 aaPredicted RBP22.26■■□□□ 1.15
TTC28-205ENST00000469670 COBLO75128 1261 aa22.25■■□□□ 1.15
TTC28-205ENST00000469670 GUCY1A2P33402 732 aa22.25■■□□□ 1.15
TTC28-205ENST00000469670 SHMT1P34896 483 aa22.25■■□□□ 1.15
TTC28-205ENST00000469670 COG2Q14746 738 aa22.25■■□□□ 1.15
TTC28-205ENST00000469670 LRRC41Q15345 812 aa22.25■■□□□ 1.15
TTC28-205ENST00000469670 C1orf53Q5VUE5 145 aa22.25■■□□□ 1.15
TTC28-205ENST00000469670 FERMT2Q96AC1 680 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms