RNA–Protein interactions for RNA: ENST00000469380.1

CSF3R-209, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 2

Gene CSF3R, Length 321 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-209ENST00000469380 SMARCA1P28370 1054 aa13.48□□□□□ -0.25
CSF3R-209ENST00000469380 CEBPZQ03701 1054 aaKnown RBP13.48□□□□□ -0.25
CSF3R-209ENST00000469380 FAM160A1Q05DH4 1040 aa13.48□□□□□ -0.25
CSF3R-209ENST00000469380 GABPAQ06546 454 aa13.48□□□□□ -0.25
CSF3R-209ENST00000469380 CCDC173Q0VFZ6 552 aa13.48□□□□□ -0.25
CSF3R-209ENST00000469380 GRM4Q14833 912 aa13.48□□□□□ -0.25
CSF3R-209ENST00000469380 SF3A1Q15459 793 aaKnown RBP13.48□□□□□ -0.25
CSF3R-209ENST00000469380 RILPL1Q5EBL4 403 aa13.48□□□□□ -0.25
CSF3R-209ENST00000469380 APOBEC3HQ6NTF7 200 aaKnown RBP13.48□□□□□ -0.25
CSF3R-209ENST00000469380 CCDC73Q6ZRK6 1079 aa13.48□□□□□ -0.25
CSF3R-209ENST00000469380 CCAR1Q8IX12 1150 aaKnown RBP13.48□□□□□ -0.25
CSF3R-209ENST00000469380 PNMA1Q8ND90 353 aa13.48□□□□□ -0.25
CSF3R-209ENST00000469380 ENGASEQ8NFI3 743 aa13.48□□□□□ -0.25
CSF3R-209ENST00000469380 PSMD1Q99460 953 aa13.48□□□□□ -0.25
CSF3R-209ENST00000469380 PANK2Q9BZ23 570 aa13.48□□□□□ -0.25
CSF3R-209ENST00000469380 USP40Q9NVE5 1235 aa13.48□□□□□ -0.25
CSF3R-209ENST00000469380 SAP30BPQ9UHR5 308 aaKnown RBP13.48□□□□□ -0.25
CSF3R-209ENST00000469380 PCDHA7Q9UN72 937 aa13.48□□□□□ -0.25
CSF3R-209ENST00000469380 CLIC4Q9Y696 253 aa13.48□□□□□ -0.25
CSF3R-209ENST00000469380 PLIN4Q96Q06 1357 aa13.47□□□□□ -0.25
CSF3R-209ENST00000469380 NMT2O60551 498 aa13.47□□□□□ -0.25
CSF3R-209ENST00000469380 NR1I2O75469 434 aa13.47□□□□□ -0.25
CSF3R-209ENST00000469380 PLEKHA8P1O95397 391 aa13.47□□□□□ -0.25
CSF3R-209ENST00000469380 CAVIN2O95810 425 aa13.47□□□□□ -0.25
CSF3R-209ENST00000469380 CRKP46108 304 aa13.47□□□□□ -0.25
CSF3R-209ENST00000469380 PPP4R3BQ5MIZ7 849 aa13.47□□□□□ -0.25
CSF3R-209ENST00000469380 DIS3L2Q8IYB7 885 aaKnown RBP13.47□□□□□ -0.25
CSF3R-209ENST00000469380 SRBD1Q8N5C6 995 aaKnown RBP13.47□□□□□ -0.25
CSF3R-209ENST00000469380 MRPS27Q92552 414 aaKnown RBP13.47□□□□□ -0.25
CSF3R-209ENST00000469380 FBXW7Q969H0 707 aa13.47□□□□□ -0.25
CSF3R-209ENST00000469380 FTOQ9C0B1 505 aaKnown RBP eCLIP13.47□□□□□ -0.25
CSF3R-209ENST00000469380 TNMDQ9H2S6 317 aa13.47□□□□□ -0.25
CSF3R-209ENST00000469380 DBNDD1Q9H9R9 158 aa13.47□□□□□ -0.25
CSF3R-209ENST00000469380 SH3GLB2Q9NR46 395 aa13.47□□□□□ -0.25
CSF3R-209ENST00000469380 SERPINA10Q9UK55 444 aa13.47□□□□□ -0.25
CSF3R-209ENST00000469380 V9GY48 417 aaPredicted RBP13.47□□□□□ -0.25
CSF3R-209ENST00000469380 SLX4Q8IY92 1834 aa13.47□□□□□ -0.25
CSF3R-209ENST00000469380 CNTNAP5Q8WYK1 1306 aa13.46□□□□□ -0.25
CSF3R-209ENST00000469380 FAM237AA0A1B0GTK4 181 aa13.46□□□□□ -0.25
CSF3R-209ENST00000469380 BTBD18B2RXH4 712 aa13.46□□□□□ -0.25
CSF3R-209ENST00000469380 CMA1P23946 247 aa13.46□□□□□ -0.25
CSF3R-209ENST00000469380 SNW1Q13573 536 aaKnown RBP13.46□□□□□ -0.25
CSF3R-209ENST00000469380 PTPAQ15257 358 aa13.46□□□□□ -0.25
CSF3R-209ENST00000469380 CCDC93Q567U6 631 aa13.46□□□□□ -0.25
CSF3R-209ENST00000469380 AXDND1Q5T1B0 1012 aaPredicted RBP13.46□□□□□ -0.25
CSF3R-209ENST00000469380 SOGA3Q5TF21 947 aa13.46□□□□□ -0.25
CSF3R-209ENST00000469380 CDC42EP5Q6NZY7 148 aa13.46□□□□□ -0.25
CSF3R-209ENST00000469380 DEFB132Q7Z7B7 95 aa13.46□□□□□ -0.25
CSF3R-209ENST00000469380 PHF20Q9BVI0 1012 aa13.46□□□□□ -0.25
CSF3R-209ENST00000469380 IDI2Q9BXS1 227 aa13.46□□□□□ -0.25
CSF3R-209ENST00000469380 EHD4Q9H223 541 aa13.46□□□□□ -0.25
CSF3R-209ENST00000469380 DHX36Q9H2U1 1008 aaKnown RBP13.46□□□□□ -0.25
CSF3R-209ENST00000469380 BRMS1Q9HCU9 246 aa13.46□□□□□ -0.25
CSF3R-209ENST00000469380 CDK5RAP2Q96SN8 1893 aa13.45□□□□□ -0.26
CSF3R-209ENST00000469380 PALM3A6NDB9 673 aaPredicted RBP13.45□□□□□ -0.26
CSF3R-209ENST00000469380 KINO60870 393 aaKnown RBP13.45□□□□□ -0.26
CSF3R-209ENST00000469380 HLA-DOAP06340 250 aa13.45□□□□□ -0.26
CSF3R-209ENST00000469380 TOP1P11387 765 aaKnown RBP13.45□□□□□ -0.26
CSF3R-209ENST00000469380 SCG2P13521 617 aa13.45□□□□□ -0.26
CSF3R-209ENST00000469380 PFKFB3Q16875 520 aaPredicted RBP13.45□□□□□ -0.26
CSF3R-209ENST00000469380 FMR1NBQ8N0W7 255 aaPredicted RBP13.45□□□□□ -0.26
CSF3R-209ENST00000469380 CMTR1Q8N1G2 835 aaKnown RBP13.45□□□□□ -0.26
CSF3R-209ENST00000469380 CCDC82Q8N4S0 544 aa13.45□□□□□ -0.26
CSF3R-209ENST00000469380 FSIP1Q8NA03 581 aa13.45□□□□□ -0.26
CSF3R-209ENST00000469380 SLC44A5Q8NCS7 719 aa13.45□□□□□ -0.26
CSF3R-209ENST00000469380 PDLIM2Q96JY6 352 aa13.45□□□□□ -0.26
CSF3R-209ENST00000469380 TMEM47Q9BQJ4 181 aa13.45□□□□□ -0.26
CSF3R-209ENST00000469380 OSBPL5Q9H0X9 879 aaPredicted RBP13.45□□□□□ -0.26
CSF3R-209ENST00000469380 CEP131Q9UPN4 1083 aa13.45□□□□□ -0.26
CSF3R-209ENST00000469380 FOCADQ5VW36 1801 aa13.45□□□□□ -0.26
CSF3R-209ENST00000469380 IGKV6D-41A0A0C4DH26 115 aa13.44□□□□□ -0.26
CSF3R-209ENST00000469380 F8W031 263 aaPredicted RBP13.44□□□□□ -0.26
CSF3R-209ENST00000469380 UBE2Q2LH0YL09 131 aa13.44□□□□□ -0.26
CSF3R-209ENST00000469380 CUTAO60888 179 aa13.44□□□□□ -0.26
CSF3R-209ENST00000469380 BMP15O95972 392 aa13.44□□□□□ -0.26
CSF3R-209ENST00000469380 KCNA3P22001 575 aa13.44□□□□□ -0.26
CSF3R-209ENST00000469380 CALML3P27482 149 aa13.44□□□□□ -0.26
CSF3R-209ENST00000469380 KRT2P35908 639 aa13.44□□□□□ -0.26
CSF3R-209ENST00000469380 SCNN1DP51172 638 aa13.44□□□□□ -0.26
CSF3R-209ENST00000469380 TGFB2P61812 414 aa13.44□□□□□ -0.26
CSF3R-209ENST00000469380 GALNT17Q6IS24 598 aa13.44□□□□□ -0.26
CSF3R-209ENST00000469380 CCDC17Q96LX7 622 aa13.44□□□□□ -0.26
CSF3R-209ENST00000469380 TIGD1Q96MW7 591 aa13.44□□□□□ -0.26
CSF3R-209ENST00000469380 MXD3Q9BW11 206 aa13.44□□□□□ -0.26
CSF3R-209ENST00000469380 GOLPH3LQ9H4A5 285 aa13.44□□□□□ -0.26
CSF3R-209ENST00000469380 DDX4Q9NQI0 724 aaKnown RBP13.44□□□□□ -0.26
CSF3R-209ENST00000469380 KCNQ5Q9NR82 932 aa13.44□□□□□ -0.26
CSF3R-209ENST00000469380 MAD2L2Q9UI95 211 aa13.44□□□□□ -0.26
CSF3R-209ENST00000469380 SERPINB13Q9UIV8 391 aa13.44□□□□□ -0.26
CSF3R-209ENST00000469380 KCNJ14Q9UNX9 436 aa13.44□□□□□ -0.26
CSF3R-209ENST00000469380 PPIP5K2O43314 1243 aa13.43□□□□□ -0.26
CSF3R-209ENST00000469380 C21orf2O43822 256 aa13.43□□□□□ -0.26
CSF3R-209ENST00000469380 TOB1P50616 345 aaPredicted RBP13.43□□□□□ -0.26
CSF3R-209ENST00000469380 AOC3Q16853 763 aa13.43□□□□□ -0.26
CSF3R-209ENST00000469380 SLC4A8Q2Y0W8 1093 aa13.43□□□□□ -0.26
CSF3R-209ENST00000469380 TPRNQ4KMQ1 711 aa13.43□□□□□ -0.26
CSF3R-209ENST00000469380 SPZ1Q9BXG8 430 aa13.43□□□□□ -0.26
CSF3R-209ENST00000469380 STX8Q9UNK0 236 aa13.43□□□□□ -0.26
CSF3R-209ENST00000469380 ECM29Q5VYK3 1845 aa13.42□□□□□ -0.26
CSF3R-209ENST00000469380 TRAPPC10P48553 1259 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms