RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 NMT2O60551 498 aa13.75□□□□□ -0.21
VARS2-205ENST00000469358 PDE8AO60658 829 aa13.75□□□□□ -0.21
VARS2-205ENST00000469358 N4BP1O75113 896 aaKnown RBP13.75□□□□□ -0.21
VARS2-205ENST00000469358 TUBB4AP04350 444 aa13.75□□□□□ -0.21
VARS2-205ENST00000469358 LONRF2Q1L5Z9 754 aa13.75□□□□□ -0.21
VARS2-205ENST00000469358 PPFIBP1Q86W92 1011 aa13.75□□□□□ -0.21
VARS2-205ENST00000469358 GPR161Q8N6U8 529 aaKnown RBP13.75□□□□□ -0.21
VARS2-205ENST00000469358 KRT23Q9C075 422 aa13.75□□□□□ -0.21
VARS2-205ENST00000469358 PODXL2Q9NZ53 605 aa13.75□□□□□ -0.21
VARS2-205ENST00000469358 DDX60Q8IY21 1712 aaKnown RBP13.75□□□□□ -0.21
VARS2-205ENST00000469358 ATRNO75882 1429 aa13.75□□□□□ -0.21
VARS2-205ENST00000469358 UQCRFS1P1P0C7P4 283 aa13.74□□□□□ -0.21
VARS2-205ENST00000469358 PKN1Q16512 942 aa13.74□□□□□ -0.21
VARS2-205ENST00000469358 CADPS2Q86UW7 1296 aa13.74□□□□□ -0.21
VARS2-205ENST00000469358 DZIP3Q86Y13 1208 aaKnown RBP13.74□□□□□ -0.21
VARS2-205ENST00000469358 TRIM10Q9UDY6 481 aa13.74□□□□□ -0.21
VARS2-205ENST00000469358 MYH7P12883 1935 aa13.74□□□□□ -0.21
VARS2-205ENST00000469358 TNS2Q63HR2 1409 aa13.74□□□□□ -0.21
VARS2-205ENST00000469358 TRIM75PA6NK02 468 aa13.74□□□□□ -0.21
VARS2-205ENST00000469358 CYP7A1P22680 504 aa13.74□□□□□ -0.21
VARS2-205ENST00000469358 CHMP4BP1P59074 171 aa13.74□□□□□ -0.21
VARS2-205ENST00000469358 DYNLL1P63167 89 aaKnown RBP13.74□□□□□ -0.21
VARS2-205ENST00000469358 PPARAQ07869 468 aa13.74□□□□□ -0.21
VARS2-205ENST00000469358 DHX8Q14562 1220 aaKnown RBP13.74□□□□□ -0.21
VARS2-205ENST00000469358 SUSD4Q5VX71 490 aa13.74□□□□□ -0.21
VARS2-205ENST00000469358 SLC35F6Q8N357 371 aa13.74□□□□□ -0.21
VARS2-205ENST00000469358 WASF1Q92558 559 aa13.74□□□□□ -0.21
VARS2-205ENST00000469358 GOLGA1Q92805 767 aa13.74□□□□□ -0.21
VARS2-205ENST00000469358 DNAJC5Q9H3Z4 198 aa13.74□□□□□ -0.21
VARS2-205ENST00000469358 GYPCP04921 128 aa13.74□□□□□ -0.21
VARS2-205ENST00000469358 CYP19A1P11511 503 aaPredicted RBP13.74□□□□□ -0.21
VARS2-205ENST00000469358 CUL4BQ13620 913 aa13.74□□□□□ -0.21
VARS2-205ENST00000469358 SART3Q15020 963 aaKnown RBP13.74□□□□□ -0.21
VARS2-205ENST00000469358 ALX1Q15699 326 aa13.74□□□□□ -0.21
VARS2-205ENST00000469358 KIF4BQ2VIQ3 1234 aa13.74□□□□□ -0.21
VARS2-205ENST00000469358 ZNF512BQ96KM6 892 aaPredicted RBP13.74□□□□□ -0.21
VARS2-205ENST00000469358 TAB2Q9NYJ8 693 aa13.74□□□□□ -0.21
VARS2-205ENST00000469358 ADD3Q9UEY8 706 aaKnown RBP13.74□□□□□ -0.21
VARS2-205ENST00000469358 CDHR2Q9BYE9 1310 aa13.73□□□□□ -0.21
VARS2-205ENST00000469358 SLC5A1P13866 664 aa13.73□□□□□ -0.21
VARS2-205ENST00000469358 CAPN2P17655 700 aa13.73□□□□□ -0.21
VARS2-205ENST00000469358 CARD10Q9BWT7 1032 aa13.73□□□□□ -0.21
VARS2-205ENST00000469358 ANKZF1Q9H8Y5 726 aa13.73□□□□□ -0.21
VARS2-205ENST00000469358 TMEM51Q9NW97 253 aa13.73□□□□□ -0.21
VARS2-205ENST00000469358 COL5A2P05997 1499 aaPredicted RBP13.73□□□□□ -0.21
VARS2-205ENST00000469358 PPP1R3GB7ZBB8 358 aa13.73□□□□□ -0.21
VARS2-205ENST00000469358 STAG1Q8WVM7 1258 aa13.73□□□□□ -0.21
VARS2-205ENST00000469358 CNNM2Q9H8M5 875 aa13.73□□□□□ -0.21
VARS2-205ENST00000469358 SOS2Q07890 1332 aaPredicted RBP13.73□□□□□ -0.21
VARS2-205ENST00000469358 PHACTR2O75167 634 aa13.73□□□□□ -0.21
VARS2-205ENST00000469358 GYG1P46976 350 aa13.73□□□□□ -0.21
VARS2-205ENST00000469358 ERVK-24P63145 666 aa13.73□□□□□ -0.21
VARS2-205ENST00000469358 AKAP17AQ02040 695 aaKnown RBP13.73□□□□□ -0.21
VARS2-205ENST00000469358 SPATA1Q5VX52 437 aa13.73□□□□□ -0.21
VARS2-205ENST00000469358 ENAHQ8N8S7 591 aaPredicted RBP13.73□□□□□ -0.21
VARS2-205ENST00000469358 SPATA20Q8TB22 786 aa13.73□□□□□ -0.21
VARS2-205ENST00000469358 HINFPQ9BQA5 517 aa13.73□□□□□ -0.21
VARS2-205ENST00000469358 NACAP1Q9BZK3 213 aa13.73□□□□□ -0.21
VARS2-205ENST00000469358 UBXN6Q9BZV1 441 aa13.73□□□□□ -0.21
VARS2-205ENST00000469358 PDE11AQ9HCR9 933 aa13.73□□□□□ -0.21
VARS2-205ENST00000469358 DACH1Q9UI36 760 aa13.73□□□□□ -0.21
VARS2-205ENST00000469358 TXLNAP40222 546 aa13.72□□□□□ -0.21
VARS2-205ENST00000469358 RABGGTAQ92696 567 aa13.72□□□□□ -0.21
VARS2-205ENST00000469358 PLIN2Q99541 437 aa13.72□□□□□ -0.21
VARS2-205ENST00000469358 SLF1Q9BQI6 1058 aa13.72□□□□□ -0.21
VARS2-205ENST00000469358 MFAP3LO75121 409 aa13.72□□□□□ -0.21
VARS2-205ENST00000469358 LMAN1P49257 510 aa13.72□□□□□ -0.21
VARS2-205ENST00000469358 PTGDRQ13258 359 aa13.72□□□□□ -0.21
VARS2-205ENST00000469358 GPIHBP1Q8IV16 184 aa13.72□□□□□ -0.21
VARS2-205ENST00000469358 MTRQ99707 1265 aa13.72□□□□□ -0.21
VARS2-205ENST00000469358 UBR2Q8IWV8 1755 aa13.72□□□□□ -0.21
VARS2-205ENST00000469358 RRAGBQ5VZM2 374 aa13.71□□□□□ -0.21
VARS2-205ENST00000469358 NCAPH2Q6IBW4 605 aa13.71□□□□□ -0.21
VARS2-205ENST00000469358 JAG2Q9Y219 1238 aa13.71□□□□□ -0.21
VARS2-205ENST00000469358 XDHP47989 1333 aa13.71□□□□□ -0.21
VARS2-205ENST00000469358 N4BP3O15049 544 aa13.71□□□□□ -0.21
VARS2-205ENST00000469358 KIF5CO60282 957 aa13.71□□□□□ -0.21
VARS2-205ENST00000469358 MCM7P33993 719 aa13.71□□□□□ -0.21
VARS2-205ENST00000469358 KRT31Q15323 416 aa13.71□□□□□ -0.21
VARS2-205ENST00000469358 TAF3Q5VWG9 929 aa13.71□□□□□ -0.21
VARS2-205ENST00000469358 CHP1Q99653 195 aa13.71□□□□□ -0.21
VARS2-205ENST00000469358 MTMR7Q9Y216 660 aa13.71□□□□□ -0.21
VARS2-205ENST00000469358 GDAQ9Y2T3 454 aa13.71□□□□□ -0.21
VARS2-205ENST00000469358 GOLGA6L9A6NEM1 432 aa13.71□□□□□ -0.22
VARS2-205ENST00000469358 PES1O00541 588 aaKnown RBP13.71□□□□□ -0.22
VARS2-205ENST00000469358 ENC1O14682 589 aa13.71□□□□□ -0.22
VARS2-205ENST00000469358 ERCC5P28715 1186 aaPredicted RBP13.71□□□□□ -0.22
VARS2-205ENST00000469358 SEC23AQ15436 765 aa13.71□□□□□ -0.22
VARS2-205ENST00000469358 FAM47AQ5JRC9 791 aa13.71□□□□□ -0.22
VARS2-205ENST00000469358 PIK3AP1Q6ZUJ8 805 aa13.71□□□□□ -0.22
VARS2-205ENST00000469358 SRGAP1Q7Z6B7 1085 aa13.71□□□□□ -0.22
VARS2-205ENST00000469358 ZNF579Q8NAF0 562 aaKnown RBP13.71□□□□□ -0.22
VARS2-205ENST00000469358 NOA1Q8NC60 698 aaKnown RBP13.71□□□□□ -0.22
VARS2-205ENST00000469358 ABCB6Q9NP58 842 aa13.71□□□□□ -0.22
VARS2-205ENST00000469358 TRIM49BA6NDI0 452 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 KRT2P35908 639 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 PBX1P40424 430 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 IL17AQ16552 155 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 GDAP1L1Q96MZ0 367 aa13.7□□□□□ -0.22
VARS2-205ENST00000469358 PANX2Q96RD6 677 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms