RNA–Protein interactions for RNA: ENST00000468886.5

GCOM1-205, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,508 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-205ENST00000468886 SHISA4Q96DD7 197 aa16.81■□□□□ 0.28
GCOM1-205ENST00000468886 V9GY48 417 aaPredicted RBP16.81■□□□□ 0.28
GCOM1-205ENST00000468886 KMT5BQ4FZB7 885 aa16.8■□□□□ 0.28
GCOM1-205ENST00000468886 C3orf67Q6ZVT6 689 aa16.8■□□□□ 0.28
GCOM1-205ENST00000468886 SMARCC1Q92922 1105 aaPredicted RBP16.8■□□□□ 0.28
GCOM1-205ENST00000468886 DDX41Q9UJV9 622 aaKnown RBP16.8■□□□□ 0.28
GCOM1-205ENST00000468886 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.8■□□□□ 0.28
GCOM1-205ENST00000468886 MORC2Q9Y6X9 1032 aaPredicted RBP16.8■□□□□ 0.28
GCOM1-205ENST00000468886 LAMB1P07942 1786 aa16.8■□□□□ 0.28
GCOM1-205ENST00000468886 WTIPA6NIX2 430 aaPredicted RBP16.8■□□□□ 0.28
GCOM1-205ENST00000468886 BMP15O95972 392 aa16.8■□□□□ 0.28
GCOM1-205ENST00000468886 PCP11498 1178 aaKnown RBP16.8■□□□□ 0.28
GCOM1-205ENST00000468886 DMTNQ08495 405 aa16.8■□□□□ 0.28
GCOM1-205ENST00000468886 SF3B3Q15393 1217 aaKnown RBP16.8■□□□□ 0.28
GCOM1-205ENST00000468886 CLEC4GQ6UXB4 293 aa16.8■□□□□ 0.28
GCOM1-205ENST00000468886 FUT2Q10981 343 aa16.79■□□□□ 0.28
GCOM1-205ENST00000468886 TBX2Q13207 712 aaPredicted RBP16.79■□□□□ 0.28
GCOM1-205ENST00000468886 CCDC93Q567U6 631 aa16.79■□□□□ 0.28
GCOM1-205ENST00000468886 SPECC1LQ69YQ0 1117 aa16.79■□□□□ 0.28
GCOM1-205ENST00000468886 FBXO38Q6PIJ6 1188 aa16.79■□□□□ 0.28
GCOM1-205ENST00000468886 BAG1Q99933 345 aaPredicted RBP16.79■□□□□ 0.28
GCOM1-205ENST00000468886 MINPP1Q9UNW1 487 aa16.79■□□□□ 0.28
GCOM1-205ENST00000468886 NPHP1O15259 732 aa16.79■□□□□ 0.28
GCOM1-205ENST00000468886 DDAH1O94760 285 aa16.79■□□□□ 0.28
GCOM1-205ENST00000468886 ERCC5P28715 1186 aaPredicted RBP16.79■□□□□ 0.28
GCOM1-205ENST00000468886 GTF2E1P29083 439 aaPredicted RBP16.79■□□□□ 0.28
GCOM1-205ENST00000468886 AFMP43652 599 aa16.79■□□□□ 0.28
GCOM1-205ENST00000468886 EARS2Q5JPH6 523 aaKnown RBP16.79■□□□□ 0.28
GCOM1-205ENST00000468886 CTR9Q6PD62 1173 aa16.79■□□□□ 0.28
GCOM1-205ENST00000468886 TMEM139Q8IV31 216 aa16.79■□□□□ 0.28
GCOM1-205ENST00000468886 SPATA20Q8TB22 786 aa16.79■□□□□ 0.28
GCOM1-205ENST00000468886 EPSTI1Q96J88 318 aa16.79■□□□□ 0.28
GCOM1-205ENST00000468886 FAM84BQ96KN1 310 aaPredicted RBP16.79■□□□□ 0.28
GCOM1-205ENST00000468886 BAZ2BQ9UIF8 2168 aaKnown RBP16.79■□□□□ 0.28
GCOM1-205ENST00000468886 TMTC3Q6ZXV5 915 aa16.78■□□□□ 0.28
GCOM1-205ENST00000468886 REXO1L1PQ8IX06 675 aa16.78■□□□□ 0.28
GCOM1-205ENST00000468886 SYMPKQ92797 1274 aaKnown RBP16.78■□□□□ 0.28
GCOM1-205ENST00000468886 FERMT2Q96AC1 680 aa16.78■□□□□ 0.28
GCOM1-205ENST00000468886 SAMSN1Q9NSI8 373 aaKnown RBP16.78■□□□□ 0.28
GCOM1-205ENST00000468886 TROAPQ12815 778 aa16.78■□□□□ 0.28
GCOM1-205ENST00000468886 UTP14CQ5TAP6 766 aaKnown RBP16.78■□□□□ 0.28
GCOM1-205ENST00000468886 BICDL1Q6ZP65 573 aa16.78■□□□□ 0.28
GCOM1-205ENST00000468886 CTCFLQ8NI51 663 aaPredicted RBP16.78■□□□□ 0.28
GCOM1-205ENST00000468886 PPP2R2CQ9Y2T4 447 aa16.78■□□□□ 0.28
GCOM1-205ENST00000468886 CCDC88AQ3V6T2 1871 aa16.78■□□□□ 0.28
GCOM1-205ENST00000468886 A0A087X0B3 334 aa16.77■□□□□ 0.28
GCOM1-205ENST00000468886 USP17L12C9JPN9 530 aa16.77■□□□□ 0.28
GCOM1-205ENST00000468886 USP17L21D6R901 530 aa16.77■□□□□ 0.28
GCOM1-205ENST00000468886 SLFN14P0C7P3 912 aa16.77■□□□□ 0.28
GCOM1-205ENST00000468886 ERCC6LQ2NKX8 1250 aa16.77■□□□□ 0.28
GCOM1-205ENST00000468886 TRIM65Q6PJ69 517 aa16.77■□□□□ 0.28
GCOM1-205ENST00000468886 PKNOX2Q96KN3 472 aa16.77■□□□□ 0.28
GCOM1-205ENST00000468886 GTPBP4Q9BZE4 634 aaKnown RBP16.77■□□□□ 0.28
GCOM1-205ENST00000468886 SEMA3EO15041 775 aa16.77■□□□□ 0.28
GCOM1-205ENST00000468886 STX10O60499 249 aa16.77■□□□□ 0.28
GCOM1-205ENST00000468886 FGRP09769 529 aa16.77■□□□□ 0.28
GCOM1-205ENST00000468886 ZNF174Q15697 407 aa16.77■□□□□ 0.28
GCOM1-205ENST00000468886 TTC38Q5R3I4 469 aa16.77■□□□□ 0.28
GCOM1-205ENST00000468886 KLHL10Q6JEL2 608 aa16.77■□□□□ 0.28
GCOM1-205ENST00000468886 ZNF384Q8TF68 577 aa16.77■□□□□ 0.28
GCOM1-205ENST00000468886 CNTNAP5Q8WYK1 1306 aa16.77■□□□□ 0.27
GCOM1-205ENST00000468886 SYNRGQ9UMZ2 1314 aa16.77■□□□□ 0.27
GCOM1-205ENST00000468886 GOLGA6L9A6NEM1 432 aa16.76■□□□□ 0.27
GCOM1-205ENST00000468886 ADKP55263 362 aaKnown RBP16.76■□□□□ 0.27
GCOM1-205ENST00000468886 CT47A1Q5JQC4 288 aaPredicted RBP16.76■□□□□ 0.27
GCOM1-205ENST00000468886 TC2NQ8N9U0 490 aa16.76■□□□□ 0.27
GCOM1-205ENST00000468886 LRRN4CLQ8ND94 238 aa16.76■□□□□ 0.27
GCOM1-205ENST00000468886 CELF1Q92879 486 aaKnown RBP16.76■□□□□ 0.27
GCOM1-205ENST00000468886 PAGE5Q96GU1 130 aa16.76■□□□□ 0.27
GCOM1-205ENST00000468886 MED15Q96RN5 788 aa16.76■□□□□ 0.27
GCOM1-205ENST00000468886 CRNKL1Q9BZJ0 848 aaKnown RBP16.76■□□□□ 0.27
GCOM1-205ENST00000468886 KDM4FA0A1W2PPD8 638 aa16.76■□□□□ 0.27
GCOM1-205ENST00000468886 URI1O94763 535 aaPredicted RBP16.76■□□□□ 0.27
GCOM1-205ENST00000468886 MNS1Q8NEH6 495 aa16.76■□□□□ 0.27
GCOM1-205ENST00000468886 NSUN4Q96CB9 384 aaKnown RBP16.76■□□□□ 0.27
GCOM1-205ENST00000468886 PRDM4Q9UKN5 801 aa16.76■□□□□ 0.27
GCOM1-205ENST00000468886 VWA3AA6NCI4 1184 aa16.75■□□□□ 0.27
GCOM1-205ENST00000468886 WNT7AO00755 349 aa16.75■□□□□ 0.27
GCOM1-205ENST00000468886 ORC4O43929 436 aa16.75■□□□□ 0.27
GCOM1-205ENST00000468886 MECOMQ03112 1051 aa16.75■□□□□ 0.27
GCOM1-205ENST00000468886 FAM177A1Q8N128 213 aaPredicted RBP16.75■□□□□ 0.27
GCOM1-205ENST00000468886 SRRTQ9BXP5 876 aaKnown RBP16.75■□□□□ 0.27
GCOM1-205ENST00000468886 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.75■□□□□ 0.27
GCOM1-205ENST00000468886 MAST2Q6P0Q8 1798 aa16.75■□□□□ 0.27
GCOM1-205ENST00000468886 KCNQ2O43526 872 aa16.75■□□□□ 0.27
GCOM1-205ENST00000468886 NR1I3Q14994 352 aa16.75■□□□□ 0.27
GCOM1-205ENST00000468886 NOM1Q5C9Z4 860 aaKnown RBP16.75■□□□□ 0.27
GCOM1-205ENST00000468886 SPATA1Q5VX52 437 aa16.75■□□□□ 0.27
GCOM1-205ENST00000468886 SH3RF1Q7Z6J0 888 aa16.75■□□□□ 0.27
GCOM1-205ENST00000468886 FBXO33Q7Z6M2 555 aa16.75■□□□□ 0.27
GCOM1-205ENST00000468886 LINC00116Q8NCU8 138 aa16.75■□□□□ 0.27
GCOM1-205ENST00000468886 TNFRSF25Q93038 417 aa16.75■□□□□ 0.27
GCOM1-205ENST00000468886 A0A1B0GTH6 734 aa16.74■□□□□ 0.27
GCOM1-205ENST00000468886 KLRK1P26718 216 aa16.74■□□□□ 0.27
GCOM1-205ENST00000468886 CASP1P29466 404 aa16.74■□□□□ 0.27
GCOM1-205ENST00000468886 STX17P56962 302 aa16.74■□□□□ 0.27
GCOM1-205ENST00000468886 KRT222Q8N1A0 295 aa16.74■□□□□ 0.27
GCOM1-205ENST00000468886 SRBD1Q8N5C6 995 aaKnown RBP16.74■□□□□ 0.27
GCOM1-205ENST00000468886 GSDMAQ96QA5 445 aa16.74■□□□□ 0.27
GCOM1-205ENST00000468886 SPATA31A5Q5VU36 1347 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms