RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 H3BS24 57 aa8.14□□□□□ -1.11
LSM5-209ENST00000468872 RBAK-RBAKDNI3L0D1 243 aa8.14□□□□□ -1.11
LSM5-209ENST00000468872 CYP7A1P22680 504 aa8.14□□□□□ -1.11
LSM5-209ENST00000468872 NAALADL2Q58DX5 795 aa8.14□□□□□ -1.11
LSM5-209ENST00000468872 BNC2Q6ZN30 1099 aaPredicted RBP8.14□□□□□ -1.11
LSM5-209ENST00000468872 ERMP1Q7Z2K6 904 aa8.14□□□□□ -1.11
LSM5-209ENST00000468872 CDH24Q86UP0 819 aa8.14□□□□□ -1.11
LSM5-209ENST00000468872 FLAD1Q8NFF5 587 aa8.14□□□□□ -1.11
LSM5-209ENST00000468872 FAM168AQ92567 244 aa8.14□□□□□ -1.11
LSM5-209ENST00000468872 ACSF2Q96CM8 615 aaPredicted RBP8.14□□□□□ -1.11
LSM5-209ENST00000468872 COX4I2Q96KJ9 171 aa8.14□□□□□ -1.11
LSM5-209ENST00000468872 LMCD1Q9NZU5 365 aa8.14□□□□□ -1.11
LSM5-209ENST00000468872 DDX41Q9UJV9 622 aaKnown RBP8.14□□□□□ -1.11
LSM5-209ENST00000468872 PCDHGB7Q9Y5F8 929 aa8.14□□□□□ -1.11
LSM5-209ENST00000468872 CILPO75339 1184 aa8.13□□□□□ -1.11
LSM5-209ENST00000468872 RACK1P63244 317 aaKnown RBP8.13□□□□□ -1.11
LSM5-209ENST00000468872 LMNB2Q03252 620 aa8.13□□□□□ -1.11
LSM5-209ENST00000468872 CAMK2GQ13555 558 aaPredicted RBP8.13□□□□□ -1.11
LSM5-209ENST00000468872 DIEXFQ68CQ4 756 aaKnown RBP8.13□□□□□ -1.11
LSM5-209ENST00000468872 ACBD3Q9H3P7 528 aa8.13□□□□□ -1.11
LSM5-209ENST00000468872 CCSER2Q9H7U1 834 aa8.13□□□□□ -1.11
LSM5-209ENST00000468872 CARS2Q9HA77 564 aaKnown RBP8.13□□□□□ -1.11
LSM5-209ENST00000468872 COPRSQ9NQ92 184 aa8.13□□□□□ -1.11
LSM5-209ENST00000468872 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.13□□□□□ -1.11
LSM5-209ENST00000468872 CORINQ9Y5Q5 1042 aa8.13□□□□□ -1.11
LSM5-209ENST00000468872 FAM221AA4D161 298 aa8.12□□□□□ -1.11
LSM5-209ENST00000468872 BPNT1O95861 308 aa8.12□□□□□ -1.11
LSM5-209ENST00000468872 F13A1P00488 732 aa8.12□□□□□ -1.11
LSM5-209ENST00000468872 PF4P02776 101 aa8.12□□□□□ -1.11
LSM5-209ENST00000468872 KIR3DL1P43629 444 aa8.12□□□□□ -1.11
LSM5-209ENST00000468872 THAP5Q7Z6K1 395 aa8.12□□□□□ -1.11
LSM5-209ENST00000468872 USP48Q86UV5 1035 aa8.12□□□□□ -1.11
LSM5-209ENST00000468872 GATAD2BQ8WXI9 593 aa8.12□□□□□ -1.11
LSM5-209ENST00000468872 RHOVQ96L33 236 aa8.12□□□□□ -1.11
LSM5-209ENST00000468872 TMEM74Q96NL1 305 aa8.12□□□□□ -1.11
LSM5-209ENST00000468872 ETV3P41162 512 aa8.11□□□□□ -1.11
LSM5-209ENST00000468872 TNK2Q07912 1038 aa8.11□□□□□ -1.11
LSM5-209ENST00000468872 DNAJB8Q8NHS0 232 aa8.11□□□□□ -1.11
LSM5-209ENST00000468872 TINF2Q9BSI4 451 aa8.11□□□□□ -1.11
LSM5-209ENST00000468872 RSRP1Q9BUV0 290 aa8.11□□□□□ -1.11
LSM5-209ENST00000468872 CTNND2Q9UQB3 1225 aa8.11□□□□□ -1.11
LSM5-209ENST00000468872 PLCG1P19174 1290 aa8.1□□□□□ -1.11
LSM5-209ENST00000468872 GBP2P32456 591 aaPredicted RBP8.1□□□□□ -1.11
LSM5-209ENST00000468872 TNNI2P48788 182 aa8.1□□□□□ -1.11
LSM5-209ENST00000468872 RELL1Q8IUW5 271 aa8.1□□□□□ -1.11
LSM5-209ENST00000468872 ZNF654Q8IZM8 581 aa8.1□□□□□ -1.11
LSM5-209ENST00000468872 TMEM40Q8WWA1 233 aa8.1□□□□□ -1.11
LSM5-209ENST00000468872 UBE2FQ969M7 185 aa8.1□□□□□ -1.11
LSM5-209ENST00000468872 KBTBD4Q9NVX7 518 aa8.1□□□□□ -1.11
LSM5-209ENST00000468872 UPK3BL1B0FP48 263 aa8.09□□□□□ -1.11
LSM5-209ENST00000468872 UPK3BL2E5RIL1 263 aa8.09□□□□□ -1.11
LSM5-209ENST00000468872 C8AP07357 584 aa8.09□□□□□ -1.11
LSM5-209ENST00000468872 PWP1Q13610 501 aa8.09□□□□□ -1.11
LSM5-209ENST00000468872 TMEM201Q5SNT2 666 aa8.09□□□□□ -1.11
LSM5-209ENST00000468872 ZSWIM9Q86XI8 627 aa8.09□□□□□ -1.11
LSM5-209ENST00000468872 ZSWIM5Q9P217 1185 aa8.09□□□□□ -1.11
LSM5-209ENST00000468872 CEP131Q9UPN4 1083 aa8.09□□□□□ -1.11
LSM5-209ENST00000468872 FAM160A1Q05DH4 1040 aa8.08□□□□□ -1.12
LSM5-209ENST00000468872 FAM13CQ8NE31 585 aa8.08□□□□□ -1.12
LSM5-209ENST00000468872 PIWIL2Q8TC59 973 aaKnown RBP8.08□□□□□ -1.12
LSM5-209ENST00000468872 PPP1R13LQ8WUF5 828 aa8.08□□□□□ -1.12
LSM5-209ENST00000468872 CYB5D2Q8WUJ1 264 aa8.08□□□□□ -1.12
LSM5-209ENST00000468872 Q96M66 194 aa8.08□□□□□ -1.12
LSM5-209ENST00000468872 USP35Q9P2H5 1018 aa8.08□□□□□ -1.12
LSM5-209ENST00000468872 PRR36Q9H6K5 1346 aa8.07□□□□□ -1.12
LSM5-209ENST00000468872 MINDY4BA8MYZ0 360 aa8.07□□□□□ -1.12
LSM5-209ENST00000468872 YARSP54577 528 aaKnown RBP8.07□□□□□ -1.12
LSM5-209ENST00000468872 SNAP47Q5SQN1 464 aa8.07□□□□□ -1.12
LSM5-209ENST00000468872 ZNF648Q5T619 568 aaPredicted RBP8.07□□□□□ -1.12
LSM5-209ENST00000468872 GOLM1Q8NBJ4 401 aa8.07□□□□□ -1.12
LSM5-209ENST00000468872 SREK1Q8WXA9 508 aaKnown RBP8.07□□□□□ -1.12
LSM5-209ENST00000468872 KRTAP9-9Q9BYP9 154 aa8.07□□□□□ -1.12
LSM5-209ENST00000468872 KRTAP9-4Q9BYQ2 154 aa8.07□□□□□ -1.12
LSM5-209ENST00000468872 CAPN10Q9HC96 672 aa8.07□□□□□ -1.12
LSM5-209ENST00000468872 C19orf73Q9NVV2 129 aa8.07□□□□□ -1.12
LSM5-209ENST00000468872 BTBD11A6QL63 1104 aa8.06□□□□□ -1.12
LSM5-209ENST00000468872 AFMP43652 599 aa8.06□□□□□ -1.12
LSM5-209ENST00000468872 KCNMB1Q16558 191 aa8.06□□□□□ -1.12
LSM5-209ENST00000468872 FYB2Q5VWT5 728 aa8.06□□□□□ -1.12
LSM5-209ENST00000468872 SLFN12Q8IYM2 578 aa8.06□□□□□ -1.12
LSM5-209ENST00000468872 REV1Q9UBZ9 1251 aa8.06□□□□□ -1.12
LSM5-209ENST00000468872 POLR3KQ9Y2Y1 108 aaPredicted RBP8.06□□□□□ -1.12
LSM5-209ENST00000468872 ZNF503-AS2A6NEH8 195 aa8.05□□□□□ -1.12
LSM5-209ENST00000468872 GRIN3BO60391 1043 aa8.05□□□□□ -1.12
LSM5-209ENST00000468872 GARTP22102 1010 aa8.05□□□□□ -1.12
LSM5-209ENST00000468872 TMPRSS7Q7RTY8 843 aa8.05□□□□□ -1.12
LSM5-209ENST00000468872 SLC43A3Q8NBI5 491 aa8.05□□□□□ -1.12
LSM5-209ENST00000468872 INPP5FQ9Y2H2 1132 aa8.05□□□□□ -1.12
LSM5-209ENST00000468872 WASH4PA8MWX3 477 aa8.04□□□□□ -1.12
LSM5-209ENST00000468872 FARP2O94887 1054 aaPredicted RBP8.04□□□□□ -1.12
LSM5-209ENST00000468872 HTR3BO95264 441 aa8.04□□□□□ -1.12
LSM5-209ENST00000468872 ESR1P03372 595 aa8.04□□□□□ -1.12
LSM5-209ENST00000468872 GDNFP39905 211 aa8.04□□□□□ -1.12
LSM5-209ENST00000468872 MPP2Q14168 576 aa8.04□□□□□ -1.12
LSM5-209ENST00000468872 REC114Q7Z4M0 266 aa8.04□□□□□ -1.12
LSM5-209ENST00000468872 FBXO27Q8NI29 283 aa8.04□□□□□ -1.12
LSM5-209ENST00000468872 ALPK1Q96QP1 1244 aa8.04□□□□□ -1.12
LSM5-209ENST00000468872 DUSP15Q9H1R2 295 aaPredicted RBP8.04□□□□□ -1.12
LSM5-209ENST00000468872 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.04□□□□□ -1.12
LSM5-209ENST00000468872 ADAMTS1Q9UHI8 967 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms