RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 LRP10Q7Z4F1 713 aa15.14■□□□□ 0.01
SHANK2-214ENST00000468619 DNAJC10Q8IXB1 793 aa15.14■□□□□ 0.01
SHANK2-214ENST00000468619 SRGAP2O75044 1071 aa15.14■□□□□ 0.01
SHANK2-214ENST00000468619 GPTP24298 496 aa15.14■□□□□ 0.01
SHANK2-214ENST00000468619 ATP2B2Q01814 1243 aa15.14■□□□□ 0.01
SHANK2-214ENST00000468619 SLC9C2Q5TAH2 1124 aa15.14■□□□□ 0.01
SHANK2-214ENST00000468619 GRAMD1CQ8IYS0 662 aa15.14■□□□□ 0.01
SHANK2-214ENST00000468619 STK11IPQ8N1F8 1099 aa15.14■□□□□ 0.01
SHANK2-214ENST00000468619 EP400Q96L91 3159 aa15.14■□□□□ 0.01
SHANK2-214ENST00000468619 EIF3HO15372 352 aaKnown RBP eCLIP15.13■□□□□ 0.01
SHANK2-214ENST00000468619 KCNQ2O43526 872 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 ECM2O94769 699 aaPredicted RBP15.13■□□□□ 0.01
SHANK2-214ENST00000468619 RIC3Q7Z5B4 369 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 GJD4Q96KN9 370 aaPredicted RBP15.13■□□□□ 0.01
SHANK2-214ENST00000468619 CAPZA3Q96KX2 299 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 MMS19Q96T76 1030 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 KLF18A0A0U1RQI7 1052 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 GOLGA8BA8MQT2 603 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 DDX58O95786 925 aaKnown RBP15.13■□□□□ 0.01
SHANK2-214ENST00000468619 AMPD2Q01433 879 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 PPFIA1Q13136 1202 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 RESP18Q5W5W9 173 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 ENOX1Q8TC92 643 aaKnown RBP15.13■□□□□ 0.01
SHANK2-214ENST00000468619 SLC4A9Q96Q91 983 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 SELENOOQ9BVL4 669 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 NAA15Q9BXJ9 866 aaKnown RBP15.13■□□□□ 0.01
SHANK2-214ENST00000468619 TRIM10Q9UDY6 481 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 TTF2Q9UNY4 1162 aaKnown RBP15.13■□□□□ 0.01
SHANK2-214ENST00000468619 GRIN2DO15399 1336 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 THSD7AQ9UPZ6 1657 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 A0A1B0GTH6 734 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 GOLGA6BA6NDN3 693 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 STX17P56962 302 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 TFCP2Q12800 502 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 DBNDD2Q9BQY9 259 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 NBPF3Q9H094 633 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 GUCA1BQ9UMX6 200 aa15.13■□□□□ 0.01
SHANK2-214ENST00000468619 ZNF330Q9Y3S2 320 aaPredicted RBP15.13■□□□□ 0.01
SHANK2-214ENST00000468619 MFAP3LO75121 409 aa15.12■□□□□ 0.01
SHANK2-214ENST00000468619 ARHGAP25P42331 645 aa15.12■□□□□ 0.01
SHANK2-214ENST00000468619 FXR1P51114 621 aaKnown RBP eCLIP15.12■□□□□ 0.01
SHANK2-214ENST00000468619 HAND2P61296 217 aa15.12■□□□□ 0.01
SHANK2-214ENST00000468619 KLHL10Q6JEL2 608 aa15.12■□□□□ 0.01
SHANK2-214ENST00000468619 OTUD6BQ8N6M0 293 aa15.12■□□□□ 0.01
SHANK2-214ENST00000468619 JMYQ8N9B5 988 aa15.12■□□□□ 0.01
SHANK2-214ENST00000468619 ZKSCAN4Q969J2 545 aaPredicted RBP15.12■□□□□ 0.01
SHANK2-214ENST00000468619 SLF1Q9BQI6 1058 aa15.12■□□□□ 0.01
SHANK2-214ENST00000468619 ARFGEF2Q9Y6D5 1785 aa15.12■□□□□ 0.01
SHANK2-214ENST00000468619 LAMA4Q16363 1823 aa15.12■□□□□ 0.01
SHANK2-214ENST00000468619 RDXP35241 583 aaKnown RBP15.12■□□□□ 0.01
SHANK2-214ENST00000468619 FNTAP49354 379 aa15.12■□□□□ 0.01
SHANK2-214ENST00000468619 PTPAQ15257 358 aa15.12■□□□□ 0.01
SHANK2-214ENST00000468619 VPS37DQ86XT2 251 aa15.12■□□□□ 0.01
SHANK2-214ENST00000468619 N4BP2L2Q92802 583 aaPredicted RBP15.12■□□□□ 0.01
SHANK2-214ENST00000468619 NDUFAB1O14561 156 aa15.11■□□□□ 0.01
SHANK2-214ENST00000468619 HSPD1P10809 573 aaKnown RBP15.11■□□□□ 0.01
SHANK2-214ENST00000468619 ELF1P32519 619 aa15.11■□□□□ 0.01
SHANK2-214ENST00000468619 POSTNQ15063 836 aa15.11■□□□□ 0.01
SHANK2-214ENST00000468619 TNNI3KQ59H18 835 aa15.11■□□□□ 0.01
SHANK2-214ENST00000468619 POLD4Q9HCU8 107 aa15.11■□□□□ 0.01
SHANK2-214ENST00000468619 FPGT-TNNI3KV9GXZ4 949 aa15.11■□□□□ 0.01
SHANK2-214ENST00000468619 PPP6R2O75170 966 aa15.11■□□□□ 0.01
SHANK2-214ENST00000468619 KIAA0754O94854 1291 aa15.11■□□□□ 0.01
SHANK2-214ENST00000468619 ERVK-24P63145 666 aa15.11■□□□□ 0.01
SHANK2-214ENST00000468619 MDM2Q00987 491 aaPredicted RBP15.11■□□□□ 0.01
SHANK2-214ENST00000468619 NEDD9Q14511 834 aa15.11■□□□□ 0.01
SHANK2-214ENST00000468619 TRPC5Q9UL62 973 aaPredicted RBP15.11■□□□□ 0.01
SHANK2-214ENST00000468619 ATRNO75882 1429 aa15.1■□□□□ 0.01
SHANK2-214ENST00000468619 PATL2C9JE40 543 aaKnown RBP15.1■□□□□ 0.01
SHANK2-214ENST00000468619 GOLIM4O00461 696 aa15.1■□□□□ 0.01
SHANK2-214ENST00000468619 CDC25AP30304 524 aa15.1■□□□□ 0.01
SHANK2-214ENST00000468619 EPHA10Q5JZY3 1008 aa15.1■□□□□ 0.01
SHANK2-214ENST00000468619 LRCH2Q5VUJ6 765 aa15.1■□□□□ 0.01
SHANK2-214ENST00000468619 ANKRD13DQ6ZTN6 518 aa15.1■□□□□ 0.01
SHANK2-214ENST00000468619 MLKLQ8NB16 471 aa15.1■□□□□ 0.01
SHANK2-214ENST00000468619 MIEF2Q96C03 454 aa15.1■□□□□ 0.01
SHANK2-214ENST00000468619 CENPHQ9H3R5 247 aa15.1■□□□□ 0.01
SHANK2-214ENST00000468619 HPS5Q9UPZ3 1129 aa15.1■□□□□ 0.01
SHANK2-214ENST00000468619 GYPCP04921 128 aa15.1■□□□□ 0.01
SHANK2-214ENST00000468619 TTLL7Q6ZT98 887 aa15.1■□□□□ 0.01
SHANK2-214ENST00000468619 MYD88Q99836 296 aa15.1■□□□□ 0.01
SHANK2-214ENST00000468619 TFR2Q9UP52 801 aa15.1■□□□□ 0.01
SHANK2-214ENST00000468619 AFDNP55196 1824 aaKnown RBP15.1■□□□□ 0.01
SHANK2-214ENST00000468619 TJP1Q07157 1748 aa15.1■□□□□ 0.01
SHANK2-214ENST00000468619 PDCLQ13371 301 aa15.09■□□□□ 0.01
SHANK2-214ENST00000468619 PTF1AQ7RTS3 328 aa15.09■□□□□ 0.01
SHANK2-214ENST00000468619 APTXQ7Z2E3 356 aaKnown RBP15.09■□□□□ 0.01
SHANK2-214ENST00000468619 QTRT2Q9H974 415 aaKnown RBP15.09■□□□□ 0.01
SHANK2-214ENST00000468619 SEC31BQ9NQW1 1179 aa15.09■□□□□ 0.01
SHANK2-214ENST00000468619 SERTAD1Q9UHV2 236 aa15.09■□□□□ 0.01
SHANK2-214ENST00000468619 POLR2DO15514 142 aaKnown RBP15.09■□□□□ 0.01
SHANK2-214ENST00000468619 C21orf2O43822 256 aa15.09■□□□□ 0.01
SHANK2-214ENST00000468619 MCM3P25205 808 aa15.09■□□□□ 0.01
SHANK2-214ENST00000468619 NF2P35240 595 aa15.09■□□□□ 0.01
SHANK2-214ENST00000468619 GRIN1Q05586 938 aa15.09■□□□□ 0.01
SHANK2-214ENST00000468619 ACTN3Q08043 901 aaPredicted RBP15.09■□□□□ 0.01
SHANK2-214ENST00000468619 DDR1Q08345 913 aa15.09■□□□□ 0.01
SHANK2-214ENST00000468619 TTC39AQ5SRH9 613 aa15.09■□□□□ 0.01
SHANK2-214ENST00000468619 ANKRD18AQ8IVF6 992 aa15.09■□□□□ 0.01
SHANK2-214ENST00000468619 KBTBD3Q8NAB2 608 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms