RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 XAGE3Q8WTP9 111 aa6.68□□□□□ -1.34
SSB-208ENST00000468600 SLC6A17Q9H1V8 727 aa6.68□□□□□ -1.34
SSB-208ENST00000468600 RTEL1Q9NZ71 1219 aa6.68□□□□□ -1.34
SSB-208ENST00000468600 SUPT5HO00267 1087 aaKnown RBP6.67□□□□□ -1.34
SSB-208ENST00000468600 CST3P01034 146 aaPredicted RBP6.67□□□□□ -1.34
SSB-208ENST00000468600 ESR1P03372 595 aa6.67□□□□□ -1.34
SSB-208ENST00000468600 FMR1Q06787 632 aaKnown RBP eCLIP6.67□□□□□ -1.34
SSB-208ENST00000468600 WIPI1Q5MNZ9 446 aaPredicted RBP6.67□□□□□ -1.34
SSB-208ENST00000468600 RASIP1Q5U651 963 aa6.67□□□□□ -1.34
SSB-208ENST00000468600 IRF2BP1Q8IU81 584 aa6.67□□□□□ -1.34
SSB-208ENST00000468600 CREG2Q8IUH2 290 aa6.67□□□□□ -1.34
SSB-208ENST00000468600 RIN3Q8TB24 985 aa6.67□□□□□ -1.34
SSB-208ENST00000468600 RNF32Q9H0A6 362 aa6.67□□□□□ -1.34
SSB-208ENST00000468600 SNCAIPQ9Y6H5 919 aa6.67□□□□□ -1.34
SSB-208ENST00000468600 ALG1LQ6GMV1 187 aa6.66□□□□□ -1.34
SSB-208ENST00000468600 ZSCAN29Q8IWY8 852 aaPredicted RBP6.66□□□□□ -1.34
SSB-208ENST00000468600 LILRA2Q8N149 483 aa6.66□□□□□ -1.34
SSB-208ENST00000468600 TRIT1Q9H3H1 467 aaKnown RBP6.66□□□□□ -1.34
SSB-208ENST00000468600 TMPRSS5Q9H3S3 457 aa6.66□□□□□ -1.34
SSB-208ENST00000468600 SEMA7AO75326 666 aa6.65□□□□□ -1.34
SSB-208ENST00000468600 CELA3AP09093 270 aa6.65□□□□□ -1.34
SSB-208ENST00000468600 ETV3P41162 512 aa6.65□□□□□ -1.34
SSB-208ENST00000468600 DLG4P78352 724 aa6.65□□□□□ -1.34
SSB-208ENST00000468600 KRTAP1-1Q07627 177 aa6.65□□□□□ -1.34
SSB-208ENST00000468600 PRRT2Q7Z6L0 340 aaPredicted RBP6.65□□□□□ -1.34
SSB-208ENST00000468600 CDH24Q86UP0 819 aa6.65□□□□□ -1.34
SSB-208ENST00000468600 OXR1Q8N573 874 aa6.65□□□□□ -1.34
SSB-208ENST00000468600 PDZD8Q8NEN9 1154 aa6.65□□□□□ -1.34
SSB-208ENST00000468600 CXorf38Q8TB03 319 aa6.65□□□□□ -1.34
SSB-208ENST00000468600 ASB16Q96NS5 453 aa6.65□□□□□ -1.34
SSB-208ENST00000468600 ADAMTS10Q9H324 1103 aa6.65□□□□□ -1.34
SSB-208ENST00000468600 TRHRP34981 398 aaPredicted RBP6.64□□□□□ -1.35
SSB-208ENST00000468600 ZNF605Q86T29 641 aa6.64□□□□□ -1.35
SSB-208ENST00000468600 BAHD1Q8TBE0 780 aaPredicted RBP6.64□□□□□ -1.35
SSB-208ENST00000468600 GAL3ST3Q96A11 431 aa6.64□□□□□ -1.35
SSB-208ENST00000468600 SYTL4Q96C24 671 aaPredicted RBP6.64□□□□□ -1.35
SSB-208ENST00000468600 OSBPL7Q9BZF2 842 aa6.64□□□□□ -1.35
SSB-208ENST00000468600 MCOLN1Q9GZU1 580 aa6.64□□□□□ -1.35
SSB-208ENST00000468600 CNOT6Q9ULM6 557 aaKnown RBP6.64□□□□□ -1.35
SSB-208ENST00000468600 RFXAPO00287 272 aa6.63□□□□□ -1.35
SSB-208ENST00000468600 TRIM13O60858 407 aa6.63□□□□□ -1.35
SSB-208ENST00000468600 TPP2P29144 1249 aaPredicted RBP6.63□□□□□ -1.35
SSB-208ENST00000468600 GRK4P32298 578 aa6.63□□□□□ -1.35
SSB-208ENST00000468600 PTPN11Q06124 597 aaPredicted RBP6.63□□□□□ -1.35
SSB-208ENST00000468600 TCERG1LQ5VWI1 586 aa6.63□□□□□ -1.35
SSB-208ENST00000468600 TMEM132EQ6IEE7 984 aa6.63□□□□□ -1.35
SSB-208ENST00000468600 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.63□□□□□ -1.35
SSB-208ENST00000468600 MARCH10Q8NA82 808 aaPredicted RBP6.63□□□□□ -1.35
SSB-208ENST00000468600 DUSP13Q9UII6 198 aa6.63□□□□□ -1.35
SSB-208ENST00000468600 FITM1A5D6W6 292 aa6.62□□□□□ -1.35
SSB-208ENST00000468600 PSPNO60542 156 aa6.62□□□□□ -1.35
SSB-208ENST00000468600 PEX10O60683 326 aa6.62□□□□□ -1.35
SSB-208ENST00000468600 LMNB1P20700 586 aa6.62□□□□□ -1.35
SSB-208ENST00000468600 MAPK8P45983 427 aa6.62□□□□□ -1.35
SSB-208ENST00000468600 ZNF385BQ569K4 471 aa6.62□□□□□ -1.35
SSB-208ENST00000468600 DHX38Q92620 1227 aaKnown RBP6.62□□□□□ -1.35
SSB-208ENST00000468600 CWC22Q9HCG8 908 aaKnown RBP6.62□□□□□ -1.35
SSB-208ENST00000468600 GPATCH2Q9NW75 528 aa6.62□□□□□ -1.35
SSB-208ENST00000468600 EGR3Q06889 387 aa6.61□□□□□ -1.35
SSB-208ENST00000468600 TMEM151BQ8IW70 566 aa6.61□□□□□ -1.35
SSB-208ENST00000468600 INTS4Q96HW7 963 aaKnown RBP6.61□□□□□ -1.35
SSB-208ENST00000468600 C19orf44Q9H6X5 657 aa6.61□□□□□ -1.35
SSB-208ENST00000468600 FAM8A1Q9UBU6 413 aa6.61□□□□□ -1.35
SSB-208ENST00000468600 SPG7Q9UQ90 795 aa6.61□□□□□ -1.35
SSB-208ENST00000468600 ADRB1P08588 477 aa6.6□□□□□ -1.35
SSB-208ENST00000468600 ZGLP1P0C6A0 271 aa6.6□□□□□ -1.35
SSB-208ENST00000468600 LTKP29376 864 aa6.6□□□□□ -1.35
SSB-208ENST00000468600 KCNA1Q09470 495 aa6.6□□□□□ -1.35
SSB-208ENST00000468600 GAB4Q2WGN9 574 aa6.6□□□□□ -1.35
SSB-208ENST00000468600 MRPL41Q8IXM3 137 aaKnown RBP6.6□□□□□ -1.35
SSB-208ENST00000468600 FRMD6Q96NE9 622 aa6.6□□□□□ -1.35
SSB-208ENST00000468600 DPH2Q9BQC3 489 aaPredicted RBP6.6□□□□□ -1.35
SSB-208ENST00000468600 XYLT2Q9H1B5 865 aa6.6□□□□□ -1.35
SSB-208ENST00000468600 C12orf49Q9H741 205 aa6.6□□□□□ -1.35
SSB-208ENST00000468600 TTF2Q9UNY4 1162 aaKnown RBP6.6□□□□□ -1.35
SSB-208ENST00000468600 TACC3Q9Y6A5 838 aa6.6□□□□□ -1.35
SSB-208ENST00000468600 ADAMTS20P59510 1910 aa6.59□□□□□ -1.35
SSB-208ENST00000468600 TEX51A0A1B0GUA7 166 aa6.59□□□□□ -1.35
SSB-208ENST00000468600 MYOCOSA0A1B0GUC4 107 aa6.59□□□□□ -1.35
SSB-208ENST00000468600 PGRP06401 933 aa6.59□□□□□ -1.35
SSB-208ENST00000468600 USP17L7P0C7H9 530 aa6.59□□□□□ -1.35
SSB-208ENST00000468600 PDE6BP35913 854 aa6.59□□□□□ -1.35
SSB-208ENST00000468600 CDK8P49336 464 aa6.59□□□□□ -1.35
SSB-208ENST00000468600 ATP2B2Q01814 1243 aa6.59□□□□□ -1.35
SSB-208ENST00000468600 NR0B2Q15466 257 aa6.59□□□□□ -1.35
SSB-208ENST00000468600 TTBK2Q6IQ55 1244 aa6.59□□□□□ -1.35
SSB-208ENST00000468600 SV2BQ7L1I2 683 aa6.59□□□□□ -1.35
SSB-208ENST00000468600 Q96M66 194 aa6.59□□□□□ -1.35
SSB-208ENST00000468600 SETDB2Q96T68 719 aa6.59□□□□□ -1.35
SSB-208ENST00000468600 DUSP15Q9H1R2 295 aaPredicted RBP6.59□□□□□ -1.35
SSB-208ENST00000468600 KCNH3Q9ULD8 1083 aa6.59□□□□□ -1.35
SSB-208ENST00000468600 YBX2Q9Y2T7 364 aaKnown RBP6.59□□□□□ -1.35
SSB-208ENST00000468600 WASH4PA8MWX3 477 aa6.58□□□□□ -1.36
SSB-208ENST00000468600 CHRNEQ04844 493 aa6.58□□□□□ -1.36
SSB-208ENST00000468600 SLC6A19Q695T7 634 aa6.58□□□□□ -1.36
SSB-208ENST00000468600 TMEM87BQ96K49 555 aa6.58□□□□□ -1.36
SSB-208ENST00000468600 SP110Q9HB58 689 aa6.58□□□□□ -1.36
SSB-208ENST00000468600 TJP2Q9UDY2 1190 aa6.58□□□□□ -1.36
SSB-208ENST00000468600 GPR160Q9UJ42 338 aa6.58□□□□□ -1.36
SSB-208ENST00000468600 WWC3Q9ULE0 1092 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms