RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 GJB1P08034 283 aa17.65■□□□□ 0.42
COL16A1-208ENST00000468459 CYP2D6P10635 497 aa17.65■□□□□ 0.42
COL16A1-208ENST00000468459 GJA8P48165 433 aa17.65■□□□□ 0.42
COL16A1-208ENST00000468459 PXYLP1Q8TE99 480 aa17.65■□□□□ 0.42
COL16A1-208ENST00000468459 ASCC2Q9H1I8 757 aaPredicted RBP17.65■□□□□ 0.42
COL16A1-208ENST00000468459 IL25Q9H293 177 aa17.65■□□□□ 0.42
COL16A1-208ENST00000468459 EPB41L4AQ9HCS5 686 aaPredicted RBP17.65■□□□□ 0.42
COL16A1-208ENST00000468459 GTF3C3Q9Y5Q9 886 aa17.65■□□□□ 0.42
COL16A1-208ENST00000468459 SIPA1L1O43166 1804 aa17.65■□□□□ 0.42
COL16A1-208ENST00000468459 GSG1L2A8MUP6 293 aa17.64■□□□□ 0.41
COL16A1-208ENST00000468459 SMIM22K7EJ46 135 aa17.64■□□□□ 0.41
COL16A1-208ENST00000468459 TNPO2O14787 897 aaKnown RBP17.64■□□□□ 0.41
COL16A1-208ENST00000468459 FOXP2O15409 715 aa17.64■□□□□ 0.41
COL16A1-208ENST00000468459 CCL5P13501 91 aa17.64■□□□□ 0.41
COL16A1-208ENST00000468459 HOXA7P31268 230 aaPredicted RBP17.64■□□□□ 0.41
COL16A1-208ENST00000468459 GCLCP48506 637 aaPredicted RBP17.64■□□□□ 0.41
COL16A1-208ENST00000468459 MTMR2Q13614 643 aa17.64■□□□□ 0.41
COL16A1-208ENST00000468459 BMP2KLQ5H9B9 411 aa17.64■□□□□ 0.41
COL16A1-208ENST00000468459 VPS53Q5VIR6 699 aa17.64■□□□□ 0.41
COL16A1-208ENST00000468459 TATDN1Q6P1N9 297 aa17.64■□□□□ 0.41
COL16A1-208ENST00000468459 CWC27Q6UX04 472 aaKnown RBP17.64■□□□□ 0.41
COL16A1-208ENST00000468459 HELLSQ9NRZ9 838 aa17.64■□□□□ 0.41
COL16A1-208ENST00000468459 ZBTB21Q9ULJ3 1066 aa17.64■□□□□ 0.41
COL16A1-208ENST00000468459 PTPRFP10586 1907 aa17.64■□□□□ 0.41
COL16A1-208ENST00000468459 CYP2D7A0A087X1C5 515 aa17.63■□□□□ 0.41
COL16A1-208ENST00000468459 ADCY3O60266 1144 aa17.63■□□□□ 0.41
COL16A1-208ENST00000468459 GDF11O95390 407 aa17.63■□□□□ 0.41
COL16A1-208ENST00000468459 CHMLP26374 656 aa17.63■□□□□ 0.41
COL16A1-208ENST00000468459 PABPC4Q13310 644 aaKnown RBP eCLIP17.63■□□□□ 0.41
COL16A1-208ENST00000468459 MCMDC2Q4G0Z9 681 aa17.63■□□□□ 0.41
COL16A1-208ENST00000468459 CRACR2BQ8N4Y2 399 aaPredicted RBP17.63■□□□□ 0.41
COL16A1-208ENST00000468459 EHD4Q9H223 541 aa17.63■□□□□ 0.41
COL16A1-208ENST00000468459 MCM9Q9NXL9 1143 aa17.63■□□□□ 0.41
COL16A1-208ENST00000468459 MORF4L1Q9UBU8 362 aa17.63■□□□□ 0.41
COL16A1-208ENST00000468459 GJD2Q9UKL4 321 aa17.63■□□□□ 0.41
COL16A1-208ENST00000468459 C19orf81C9J6K1 198 aa17.62■□□□□ 0.41
COL16A1-208ENST00000468459 HLA-DOAP06340 250 aa17.62■□□□□ 0.41
COL16A1-208ENST00000468459 ELNP15502 786 aa17.62■□□□□ 0.41
COL16A1-208ENST00000468459 UBXN2AP68543 259 aa17.62■□□□□ 0.41
COL16A1-208ENST00000468459 TICAM2Q86XR7 235 aa17.62■□□□□ 0.41
COL16A1-208ENST00000468459 NKX2-3Q8TAU0 364 aa17.62■□□□□ 0.41
COL16A1-208ENST00000468459 RNF208Q9H0X6 261 aa17.62■□□□□ 0.41
COL16A1-208ENST00000468459 UNC93B1Q9H1C4 597 aa17.62■□□□□ 0.41
COL16A1-208ENST00000468459 CCDC171Q6TFL3 1326 aa17.62■□□□□ 0.41
COL16A1-208ENST00000468459 MYH1P12882 1939 aa17.61■□□□□ 0.41
COL16A1-208ENST00000468459 USP17L10C9JJH3 530 aa17.61■□□□□ 0.41
COL16A1-208ENST00000468459 HIP1O00291 1037 aa17.61■□□□□ 0.41
COL16A1-208ENST00000468459 PLCD1P51178 756 aa17.61■□□□□ 0.41
COL16A1-208ENST00000468459 POTEEQ6S8J3 1075 aa17.61■□□□□ 0.41
COL16A1-208ENST00000468459 P2RX7Q99572 595 aaKnown RBP17.61■□□□□ 0.41
COL16A1-208ENST00000468459 EMILIN3Q9NT22 766 aa17.61■□□□□ 0.41
COL16A1-208ENST00000468459 ATP8A2Q9NTI2 1148 aa17.61■□□□□ 0.41
COL16A1-208ENST00000468459 SERPINB13Q9UIV8 391 aa17.61■□□□□ 0.41
COL16A1-208ENST00000468459 BAZ2AQ9UIF9 1905 aaKnown RBP17.6■□□□□ 0.41
COL16A1-208ENST00000468459 USP17L12C9JPN9 530 aa17.6■□□□□ 0.41
COL16A1-208ENST00000468459 USP17L21D6R901 530 aa17.6■□□□□ 0.41
COL16A1-208ENST00000468459 GH2P01242 217 aa17.6■□□□□ 0.41
COL16A1-208ENST00000468459 APPP05067 770 aa17.6■□□□□ 0.41
COL16A1-208ENST00000468459 INHAP05111 366 aa17.6■□□□□ 0.41
COL16A1-208ENST00000468459 POLR3DP05423 398 aaPredicted RBP17.6■□□□□ 0.41
COL16A1-208ENST00000468459 GNAT2P19087 354 aa17.6■□□□□ 0.41
COL16A1-208ENST00000468459 HABP4Q5JVS0 413 aaKnown RBP17.6■□□□□ 0.41
COL16A1-208ENST00000468459 U2AF1L4Q8WU68 220 aaKnown RBP17.6■□□□□ 0.41
COL16A1-208ENST00000468459 COA7Q96BR5 231 aa17.6■□□□□ 0.41
COL16A1-208ENST00000468459 TXNRD2Q9NNW7 524 aa17.6■□□□□ 0.41
COL16A1-208ENST00000468459 TMOD4Q9NZQ9 345 aa17.6■□□□□ 0.41
COL16A1-208ENST00000468459 BIN2Q9UBW5 565 aaPredicted RBP17.6■□□□□ 0.41
COL16A1-208ENST00000468459 RANBP2P49792 3224 aaKnown RBP17.6■□□□□ 0.41
COL16A1-208ENST00000468459 LOC285556D6RIA3 1793 aa17.59■□□□□ 0.41
COL16A1-208ENST00000468459 PATL2C9JE40 543 aaKnown RBP17.59■□□□□ 0.41
COL16A1-208ENST00000468459 PEX10O60683 326 aa17.59■□□□□ 0.41
COL16A1-208ENST00000468459 SGPL1O95470 568 aa17.59■□□□□ 0.41
COL16A1-208ENST00000468459 TDO2P48775 406 aa17.59■□□□□ 0.41
COL16A1-208ENST00000468459 GABPAQ06546 454 aa17.59■□□□□ 0.41
COL16A1-208ENST00000468459 CTR9Q6PD62 1173 aa17.59■□□□□ 0.41
COL16A1-208ENST00000468459 IFNL3Q8IZI9 196 aa17.59■□□□□ 0.41
COL16A1-208ENST00000468459 DYNLL2Q96FJ2 89 aa17.59■□□□□ 0.41
COL16A1-208ENST00000468459 C12orf42Q96LP6 360 aa17.59■□□□□ 0.41
COL16A1-208ENST00000468459 TRIM34Q9BYJ4 488 aa17.59■□□□□ 0.41
COL16A1-208ENST00000468459 PAK6Q9NQU5 681 aaPredicted RBP17.59■□□□□ 0.41
COL16A1-208ENST00000468459 RBPJLQ9UBG7 517 aa17.59■□□□□ 0.41
COL16A1-208ENST00000468459 SHMT1P34896 483 aa17.58■□□□□ 0.4
COL16A1-208ENST00000468459 HERVK_113P62684 666 aa17.58■□□□□ 0.4
COL16A1-208ENST00000468459 TTC6Q86TZ1 520 aa17.58■□□□□ 0.4
COL16A1-208ENST00000468459 SLC44A5Q8NCS7 719 aa17.58■□□□□ 0.4
COL16A1-208ENST00000468459 DDRGK1Q96HY6 314 aa17.58■□□□□ 0.4
COL16A1-208ENST00000468459 HSPD1P10809 573 aaKnown RBP17.57■□□□□ 0.4
COL16A1-208ENST00000468459 GUCY1A2P33402 732 aa17.57■□□□□ 0.4
COL16A1-208ENST00000468459 IRX3P78415 501 aaPredicted RBP17.57■□□□□ 0.4
COL16A1-208ENST00000468459 Q3C1V9 767 aa17.57■□□□□ 0.4
COL16A1-208ENST00000468459 C12orf60Q5U649 245 aa17.57■□□□□ 0.4
COL16A1-208ENST00000468459 GIMAP6Q6P9H5 292 aa17.57■□□□□ 0.4
COL16A1-208ENST00000468459 USP17L2Q6R6M4 530 aa17.57■□□□□ 0.4
COL16A1-208ENST00000468459 CRISPLD2Q9H0B8 497 aa17.57■□□□□ 0.4
COL16A1-208ENST00000468459 RAD50Q92878 1312 aa17.56■□□□□ 0.4
COL16A1-208ENST00000468459 H0YGN5 161 aa17.56■□□□□ 0.4
COL16A1-208ENST00000468459 SGSM2O43147 1006 aa17.56■□□□□ 0.4
COL16A1-208ENST00000468459 CERKLQ49MI3 558 aaPredicted RBP17.56■□□□□ 0.4
COL16A1-208ENST00000468459 STK11IPQ8N1F8 1099 aa17.56■□□□□ 0.4
COL16A1-208ENST00000468459 GPRC5AQ8NFJ5 357 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms