RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 TSPY2A6NKD2 308 aa9.64□□□□□ -0.87
BRCA1-208ENST00000468300 NT5C2P49902 561 aa9.64□□□□□ -0.87
BRCA1-208ENST00000468300 TCP10Q12799 353 aa9.64□□□□□ -0.87
BRCA1-208ENST00000468300 RESTQ13127 1097 aa9.64□□□□□ -0.87
BRCA1-208ENST00000468300 RRP1BQ14684 758 aaKnown RBP9.64□□□□□ -0.87
BRCA1-208ENST00000468300 SPDYE2Q495Y8 402 aa9.64□□□□□ -0.87
BRCA1-208ENST00000468300 CIAPIN1Q6FI81 312 aa9.64□□□□□ -0.87
BRCA1-208ENST00000468300 RASGRP2Q7LDG7 609 aa9.64□□□□□ -0.87
BRCA1-208ENST00000468300 DGKHQ86XP1 1220 aa9.64□□□□□ -0.87
BRCA1-208ENST00000468300 CMTR1Q8N1G2 835 aaKnown RBP9.64□□□□□ -0.87
BRCA1-208ENST00000468300 ZNF70Q9UC06 446 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-208ENST00000468300 GOLGA8AA7E2F4 631 aa9.64□□□□□ -0.87
BRCA1-208ENST00000468300 RBM5P52756 815 aaKnown RBP eCLIP9.64□□□□□ -0.87
BRCA1-208ENST00000468300 JAG1P78504 1218 aa9.64□□□□□ -0.87
BRCA1-208ENST00000468300 IFIT1BQ5T764 474 aaKnown RBP9.64□□□□□ -0.87
BRCA1-208ENST00000468300 NFXL1Q6ZNB6 911 aa9.64□□□□□ -0.87
BRCA1-208ENST00000468300 CDAN1Q8IWY9 1227 aa9.64□□□□□ -0.87
BRCA1-208ENST00000468300 WNT10BO00744 389 aa9.64□□□□□ -0.87
BRCA1-208ENST00000468300 AKR1B1P15121 316 aa9.64□□□□□ -0.87
BRCA1-208ENST00000468300 IFNAR1P17181 557 aa9.64□□□□□ -0.87
BRCA1-208ENST00000468300 HMGN5P82970 282 aaKnown RBP9.64□□□□□ -0.87
BRCA1-208ENST00000468300 SART3Q15020 963 aaKnown RBP9.64□□□□□ -0.87
BRCA1-208ENST00000468300 TATDN1Q6P1N9 297 aa9.64□□□□□ -0.87
BRCA1-208ENST00000468300 IQCA1Q86XH1 822 aa9.64□□□□□ -0.87
BRCA1-208ENST00000468300 MKNK2Q9HBH9 465 aa9.64□□□□□ -0.87
BRCA1-208ENST00000468300 SERPINB13Q9UIV8 391 aa9.64□□□□□ -0.87
BRCA1-208ENST00000468300 ENTPD3O75355 529 aa9.63□□□□□ -0.87
BRCA1-208ENST00000468300 PLEKHA8P1O95397 391 aa9.63□□□□□ -0.87
BRCA1-208ENST00000468300 FMNL1O95466 1100 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-208ENST00000468300 PKN1Q16512 942 aa9.63□□□□□ -0.87
BRCA1-208ENST00000468300 NBPF9Q3BBW0 867 aa9.63□□□□□ -0.87
BRCA1-208ENST00000468300 TTC6Q86TZ1 520 aa9.63□□□□□ -0.87
BRCA1-208ENST00000468300 CRACR2BQ8N4Y2 399 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-208ENST00000468300 STK36Q9NRP7 1315 aa9.63□□□□□ -0.87
BRCA1-208ENST00000468300 FAM196BA6NMK8 535 aa9.63□□□□□ -0.87
BRCA1-208ENST00000468300 DDAH1O94760 285 aa9.63□□□□□ -0.87
BRCA1-208ENST00000468300 MCTP1Q6DN14 999 aa9.63□□□□□ -0.87
BRCA1-208ENST00000468300 OTUD7BQ6GQQ9 843 aa9.63□□□□□ -0.87
BRCA1-208ENST00000468300 FAM173BQ6P4H8 233 aa9.63□□□□□ -0.87
BRCA1-208ENST00000468300 SIAH1Q8IUQ4 282 aa9.63□□□□□ -0.87
BRCA1-208ENST00000468300 CEP95Q96GE4 821 aa9.63□□□□□ -0.87
BRCA1-208ENST00000468300 TMEM47Q9BQJ4 181 aa9.63□□□□□ -0.87
BRCA1-208ENST00000468300 MYOZ2Q9NPC6 264 aa9.63□□□□□ -0.87
BRCA1-208ENST00000468300 ASTN2O75129 1339 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-208ENST00000468300 CLRN2A0PK11 232 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 ERICH2A1L162 156 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 TSPY3P0CV98 308 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 TSPY8P0CW00 308 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 SRBD1Q8N5C6 995 aaKnown RBP9.62□□□□□ -0.87
BRCA1-208ENST00000468300 JDP2Q8WYK2 163 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 DHX36Q9H2U1 1008 aaKnown RBP9.62□□□□□ -0.87
BRCA1-208ENST00000468300 MAD2L2Q9UI95 211 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 VPS37CA5D8V6 355 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-208ENST00000468300 DHX16O60231 1041 aaKnown RBP9.62□□□□□ -0.87
BRCA1-208ENST00000468300 PDCP20941 246 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 RTN1Q16799 776 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 CLEC10AQ8IUN9 316 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 AMOTL1Q8IY63 956 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 ZNF444Q8N0Y2 327 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-208ENST00000468300 GBP4Q96PP9 640 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 ORC3Q9UBD5 711 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-208ENST00000468300 SWAP70Q9UH65 585 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 ATAD5Q96QE3 1844 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 KIF28PB7ZC32 967 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 VEGFAP15692 232 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-208ENST00000468300 GMPSP49915 693 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-208ENST00000468300 SETQ01105 290 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-208ENST00000468300 DNM1Q05193 864 aaKnown RBP9.62□□□□□ -0.87
BRCA1-208ENST00000468300 TNIP1Q15025 636 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 DLGAP5Q15398 846 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 FOXD4L6Q3SYB3 417 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-208ENST00000468300 FOXD4L3Q6VB84 417 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-208ENST00000468300 FERMT3Q86UX7 667 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 STAG2Q8N3U4 1231 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 TMEM87AQ8NBN3 555 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 RGS22Q8NE09 1264 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 FBXO18Q8NFZ0 1043 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 MTMR4Q9NYA4 1195 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 PI4KBQ9UBF8 816 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 CNPY2Q9Y2B0 182 aa9.62□□□□□ -0.87
BRCA1-208ENST00000468300 CNTNAP5Q8WYK1 1306 aa9.61□□□□□ -0.87
BRCA1-208ENST00000468300 RPS12P25398 132 aaKnown RBP9.61□□□□□ -0.87
BRCA1-208ENST00000468300 FOSBP53539 338 aa9.61□□□□□ -0.87
BRCA1-208ENST00000468300 TMTC3Q6ZXV5 915 aa9.61□□□□□ -0.87
BRCA1-208ENST00000468300 NUP133Q8WUM0 1156 aa9.61□□□□□ -0.87
BRCA1-208ENST00000468300 MAP3K14Q99558 947 aa9.61□□□□□ -0.87
BRCA1-208ENST00000468300 TCP10L2B9ZVM9 353 aa9.61□□□□□ -0.87
BRCA1-208ENST00000468300 HSP90AA2PQ14568 343 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-208ENST00000468300 CATIPQ7Z7H3 387 aa9.61□□□□□ -0.87
BRCA1-208ENST00000468300 PNMA1Q8ND90 353 aa9.61□□□□□ -0.87
BRCA1-208ENST00000468300 GPT2Q8TD30 523 aa9.61□□□□□ -0.87
BRCA1-208ENST00000468300 DPF2Q92785 391 aa9.61□□□□□ -0.87
BRCA1-208ENST00000468300 TEPSINQ96N21 525 aa9.61□□□□□ -0.87
BRCA1-208ENST00000468300 GDPD2Q9HCC8 539 aa9.61□□□□□ -0.87
BRCA1-208ENST00000468300 SCAF8Q9UPN6 1271 aaKnown RBP9.61□□□□□ -0.87
BRCA1-208ENST00000468300 CYTH3O43739 400 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 GUCY1B3Q02153 619 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 MAP3K10Q02779 954 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 GRM4Q14833 912 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 FKBP1CQ5VVH2 108 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms