RNA–Protein interactions for RNA: ENST00000468284.1

CKAP2-205, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 3

Gene CKAP2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-205ENST00000468284 SEMA6BQ9H3T3 888 aa12.1□□□□□ -0.47
CKAP2-205ENST00000468284 ALDH1B1P30837 517 aa12.09□□□□□ -0.47
CKAP2-205ENST00000468284 GMPSP49915 693 aaPredicted RBP12.09□□□□□ -0.47
CKAP2-205ENST00000468284 CXCL9Q07325 125 aa12.09□□□□□ -0.47
CKAP2-205ENST00000468284 AOC3Q16853 763 aa12.09□□□□□ -0.47
CKAP2-205ENST00000468284 CDCA8Q53HL2 280 aa12.09□□□□□ -0.47
CKAP2-205ENST00000468284 RGMBQ6NW40 437 aa12.09□□□□□ -0.47
CKAP2-205ENST00000468284 BTLAQ7Z6A9 289 aa12.09□□□□□ -0.47
CKAP2-205ENST00000468284 Q8N3U1 123 aa12.09□□□□□ -0.47
CKAP2-205ENST00000468284 SAGE1Q9NXZ1 904 aa12.09□□□□□ -0.47
CKAP2-205ENST00000468284 USP16Q9Y5T5 823 aa12.09□□□□□ -0.47
CKAP2-205ENST00000468284 NID1P14543 1247 aa12.08□□□□□ -0.48
CKAP2-205ENST00000468284 TRIM28Q13263 835 aaKnown RBP12.08□□□□□ -0.48
CKAP2-205ENST00000468284 HLFQ16534 295 aa12.08□□□□□ -0.48
CKAP2-205ENST00000468284 ZNF790Q6PG37 636 aa12.08□□□□□ -0.48
CKAP2-205ENST00000468284 TPTE2Q6XPS3 522 aa12.08□□□□□ -0.48
CKAP2-205ENST00000468284 CDC37L1Q7L3B6 337 aa12.08□□□□□ -0.48
CKAP2-205ENST00000468284 CSRNP1Q96S65 589 aa12.08□□□□□ -0.48
CKAP2-205ENST00000468284 POLR3GLQ9BT43 218 aa12.08□□□□□ -0.48
CKAP2-205ENST00000468284 NIP7Q9Y221 180 aaKnown RBP eCLIP12.08□□□□□ -0.48
CKAP2-205ENST00000468284 ABCC12Q96J65 1359 aa12.07□□□□□ -0.48
CKAP2-205ENST00000468284 NPC1L1Q9UHC9 1359 aa12.07□□□□□ -0.48
CKAP2-205ENST00000468284 ITGB7P26010 798 aa12.07□□□□□ -0.48
CKAP2-205ENST00000468284 TBC1D8BQ0IIM8 1120 aa12.07□□□□□ -0.48
CKAP2-205ENST00000468284 C20orf204Q6ZNR8 217 aa12.07□□□□□ -0.48
CKAP2-205ENST00000468284 NIM1KQ8IY84 436 aa12.07□□□□□ -0.48
CKAP2-205ENST00000468284 IL17REQ8NFR9 667 aa12.07□□□□□ -0.48
CKAP2-205ENST00000468284 MKI67P46013 3256 aaKnown RBP12.06□□□□□ -0.48
CKAP2-205ENST00000468284 PPIP5K2O43314 1243 aa12.06□□□□□ -0.48
CKAP2-205ENST00000468284 ZNF157P51786 506 aaPredicted RBP12.06□□□□□ -0.48
CKAP2-205ENST00000468284 CRY2Q49AN0 593 aa12.06□□□□□ -0.48
CKAP2-205ENST00000468284 UBE2OQ9C0C9 1292 aaKnown RBP12.06□□□□□ -0.48
CKAP2-205ENST00000468284 EGFRP00533 1210 aa12.05□□□□□ -0.48
CKAP2-205ENST00000468284 CLEC4GQ6UXB4 293 aa12.05□□□□□ -0.48
CKAP2-205ENST00000468284 NPM2Q86SE8 214 aaKnown RBP12.05□□□□□ -0.48
CKAP2-205ENST00000468284 NACC1Q96RE7 527 aa12.05□□□□□ -0.48
CKAP2-205ENST00000468284 HINFPQ9BQA5 517 aa12.05□□□□□ -0.48
CKAP2-205ENST00000468284 TEX13AQ9BXU3 409 aaPredicted RBP12.05□□□□□ -0.48
CKAP2-205ENST00000468284 ADM5C9JUS6 153 aa12.04□□□□□ -0.48
CKAP2-205ENST00000468284 LILRB5O75023 590 aa12.04□□□□□ -0.48
CKAP2-205ENST00000468284 RAD17O75943 681 aa12.04□□□□□ -0.48
CKAP2-205ENST00000468284 ZNF296Q8WUU4 475 aaPredicted RBP12.04□□□□□ -0.48
CKAP2-205ENST00000468284 IGFLR1Q9H665 355 aa12.04□□□□□ -0.48
CKAP2-205ENST00000468284 SIPA1L3O60292 1781 aaPredicted RBP12.04□□□□□ -0.48
CKAP2-205ENST00000468284 DLL1O00548 723 aa12.03□□□□□ -0.48
CKAP2-205ENST00000468284 TBC1D8O95759 1140 aa12.03□□□□□ -0.48
CKAP2-205ENST00000468284 RTN1Q16799 776 aa12.03□□□□□ -0.48
CKAP2-205ENST00000468284 IER5Q5VY09 327 aa12.03□□□□□ -0.48
CKAP2-205ENST00000468284 FMNL2Q96PY5 1086 aa12.03□□□□□ -0.48
CKAP2-205ENST00000468284 BCL2L13Q9BXK5 485 aa12.03□□□□□ -0.48
CKAP2-205ENST00000468284 GBA2Q9HCG7 927 aaPredicted RBP12.03□□□□□ -0.48
CKAP2-205ENST00000468284 CNOT7Q9UIV1 285 aaKnown RBP12.03□□□□□ -0.48
CKAP2-205ENST00000468284 ZNRF3Q9ULT6 936 aa12.03□□□□□ -0.48
CKAP2-205ENST00000468284 SLC6A14Q9UN76 642 aa12.03□□□□□ -0.48
CKAP2-205ENST00000468284 AKAP11Q9UKA4 1901 aa12.02□□□□□ -0.49
CKAP2-205ENST00000468284 GRIK4Q16099 956 aa12.02□□□□□ -0.49
CKAP2-205ENST00000468284 CRTC2Q53ET0 693 aaPredicted RBP12.02□□□□□ -0.49
CKAP2-205ENST00000468284 MORC1Q86VD1 984 aa12.02□□□□□ -0.49
CKAP2-205ENST00000468284 PANK3Q9H999 370 aa12.02□□□□□ -0.49
CKAP2-205ENST00000468284 EFCC1Q9HA90 598 aa12.02□□□□□ -0.49
CKAP2-205ENST00000468284 TPSG1Q9NRR2 321 aa12.02□□□□□ -0.49
CKAP2-205ENST00000468284 ZNF652Q9Y2D9 606 aa12.02□□□□□ -0.49
CKAP2-205ENST00000468284 YDJCA8MPS7 323 aa12.01□□□□□ -0.49
CKAP2-205ENST00000468284 LGR5O75473 907 aa12.01□□□□□ -0.49
CKAP2-205ENST00000468284 HOXA10P31260 410 aaPredicted RBP12.01□□□□□ -0.49
CKAP2-205ENST00000468284 TEFQ10587 303 aa12.01□□□□□ -0.49
CKAP2-205ENST00000468284 DPYDQ12882 1025 aa12.01□□□□□ -0.49
CKAP2-205ENST00000468284 PTK7Q13308 1070 aa12.01□□□□□ -0.49
CKAP2-205ENST00000468284 RSPO4Q2I0M5 234 aaPredicted RBP12.01□□□□□ -0.49
CKAP2-205ENST00000468284 RPGRQ92834 1020 aaKnown RBP12.01□□□□□ -0.49
CKAP2-205ENST00000468284 CALR3Q96L12 384 aaKnown RBP12.01□□□□□ -0.49
CKAP2-205ENST00000468284 PPP1R12CQ9BZL4 782 aa12.01□□□□□ -0.49
CKAP2-205ENST00000468284 HDAC9Q9UKV0 1011 aa12.01□□□□□ -0.49
CKAP2-205ENST00000468284 TGFBR3LH3BV60 316 aa12□□□□□ -0.49
CKAP2-205ENST00000468284 PKN2Q16513 984 aaKnown RBP12□□□□□ -0.49
CKAP2-205ENST00000468284 TBC1D10BQ4KMP7 808 aaPredicted RBP12□□□□□ -0.49
CKAP2-205ENST00000468284 KRT26Q7Z3Y9 468 aa12□□□□□ -0.49
CKAP2-205ENST00000468284 RASAL3Q86YV0 1011 aa12□□□□□ -0.49
CKAP2-205ENST00000468284 C2orf69Q8N8R5 385 aa12□□□□□ -0.49
CKAP2-205ENST00000468284 PNMA5Q96PV4 448 aa12□□□□□ -0.49
CKAP2-205ENST00000468284 GSX2Q9BZM3 304 aa12□□□□□ -0.49
CKAP2-205ENST00000468284 JPH1Q9HDC5 661 aaPredicted RBP12□□□□□ -0.49
CKAP2-205ENST00000468284 SZT2Q5T011 3432 aa12□□□□□ -0.49
CKAP2-205ENST00000468284 IGFBP4P22692 258 aa11.99□□□□□ -0.49
CKAP2-205ENST00000468284 NKAPLQ5M9Q1 402 aa11.99□□□□□ -0.49
CKAP2-205ENST00000468284 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.99□□□□□ -0.49
CKAP2-205ENST00000468284 ASTN2O75129 1339 aaPredicted RBP11.99□□□□□ -0.49
CKAP2-205ENST00000468284 RIC1Q4ADV7 1423 aa11.98□□□□□ -0.49
CKAP2-205ENST00000468284 UBN2Q6ZU65 1347 aa11.98□□□□□ -0.49
CKAP2-205ENST00000468284 BTBD11A6QL63 1104 aa11.98□□□□□ -0.49
CKAP2-205ENST00000468284 USP17L15C9J2P7 530 aa11.98□□□□□ -0.49
CKAP2-205ENST00000468284 USP17L10C9JJH3 530 aa11.98□□□□□ -0.49
CKAP2-205ENST00000468284 USP17L13C9JLJ4 530 aa11.98□□□□□ -0.49
CKAP2-205ENST00000468284 USP17L12C9JPN9 530 aa11.98□□□□□ -0.49
CKAP2-205ENST00000468284 USP17L11C9JVI0 530 aa11.98□□□□□ -0.49
CKAP2-205ENST00000468284 USP17L21D6R901 530 aa11.98□□□□□ -0.49
CKAP2-205ENST00000468284 USP17L18D6R9N7 530 aa11.98□□□□□ -0.49
CKAP2-205ENST00000468284 USP17L22D6RA61 530 aa11.98□□□□□ -0.49
CKAP2-205ENST00000468284 USP17L17D6RBQ6 530 aa11.98□□□□□ -0.49
CKAP2-205ENST00000468284 USP17L19D6RCP7 530 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms