RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 OSBP2Q969R2 916 aa17.5■□□□□ 0.39
COMMD3-206ENST00000468179 EVI5LQ96CN4 794 aa17.5■□□□□ 0.39
COMMD3-206ENST00000468179 C12orf42Q96LP6 360 aa17.5■□□□□ 0.39
COMMD3-206ENST00000468179 NACAP1Q9BZK3 213 aa17.5■□□□□ 0.39
COMMD3-206ENST00000468179 SSUH2Q9Y2M2 353 aa17.5■□□□□ 0.39
COMMD3-206ENST00000468179 PTCH2Q9Y6C5 1203 aa17.5■□□□□ 0.39
COMMD3-206ENST00000468179 GPAA1O43292 621 aa17.49■□□□□ 0.39
COMMD3-206ENST00000468179 CHGBP05060 677 aa17.49■□□□□ 0.39
COMMD3-206ENST00000468179 APPP05067 770 aa17.49■□□□□ 0.39
COMMD3-206ENST00000468179 CYP2D6P10635 497 aa17.49■□□□□ 0.39
COMMD3-206ENST00000468179 PDE1AP54750 535 aa17.49■□□□□ 0.39
COMMD3-206ENST00000468179 CAP1Q01518 475 aa17.49■□□□□ 0.39
COMMD3-206ENST00000468179 SHROOM1Q2M3G4 852 aaPredicted RBP17.49■□□□□ 0.39
COMMD3-206ENST00000468179 SBK1Q52WX2 424 aa17.49■□□□□ 0.39
COMMD3-206ENST00000468179 CTR9Q6PD62 1173 aa17.49■□□□□ 0.39
COMMD3-206ENST00000468179 C16orf86Q6ZW13 317 aa17.49■□□□□ 0.39
COMMD3-206ENST00000468179 COA7Q96BR5 231 aa17.49■□□□□ 0.39
COMMD3-206ENST00000468179 TMEM106CQ9BVX2 250 aa17.49■□□□□ 0.39
COMMD3-206ENST00000468179 SH2D4AQ9H788 454 aa17.49■□□□□ 0.39
COMMD3-206ENST00000468179 ZNF287Q9HBT7 754 aa17.49■□□□□ 0.39
COMMD3-206ENST00000468179 EMILIN3Q9NT22 766 aa17.49■□□□□ 0.39
COMMD3-206ENST00000468179 MYPNQ86TC9 1320 aa17.49■□□□□ 0.39
COMMD3-206ENST00000468179 SALL3Q9BXA9 1300 aa17.49■□□□□ 0.39
COMMD3-206ENST00000468179 ATAD5Q96QE3 1844 aa17.49■□□□□ 0.39
COMMD3-206ENST00000468179 USP17L15C9J2P7 530 aa17.48■□□□□ 0.39
COMMD3-206ENST00000468179 PATL2C9JE40 543 aaKnown RBP17.48■□□□□ 0.39
COMMD3-206ENST00000468179 USP17L13C9JLJ4 530 aa17.48■□□□□ 0.39
COMMD3-206ENST00000468179 USP17L11C9JVI0 530 aa17.48■□□□□ 0.39
COMMD3-206ENST00000468179 USP17L18D6R9N7 530 aa17.48■□□□□ 0.39
COMMD3-206ENST00000468179 USP17L22D6RA61 530 aa17.48■□□□□ 0.39
COMMD3-206ENST00000468179 USP17L17D6RBQ6 530 aa17.48■□□□□ 0.39
COMMD3-206ENST00000468179 USP17L19D6RCP7 530 aa17.48■□□□□ 0.39
COMMD3-206ENST00000468179 USP17L20D6RJB6 530 aa17.48■□□□□ 0.39
COMMD3-206ENST00000468179 TNPO2O14787 897 aaKnown RBP17.48■□□□□ 0.39
COMMD3-206ENST00000468179 CDK8P49336 464 aa17.48■□□□□ 0.39
COMMD3-206ENST00000468179 USP17L24Q0WX57 530 aa17.48■□□□□ 0.39
COMMD3-206ENST00000468179 DYNLL2Q96FJ2 89 aa17.48■□□□□ 0.39
COMMD3-206ENST00000468179 ARHGEF10LQ9HCE6 1279 aa17.48■□□□□ 0.39
COMMD3-206ENST00000468179 NAV1Q8NEY1 1877 aa17.48■□□□□ 0.39
COMMD3-206ENST00000468179 GSG1L2A8MUP6 293 aa17.47■□□□□ 0.39
COMMD3-206ENST00000468179 ECM2O94769 699 aaPredicted RBP17.47■□□□□ 0.39
COMMD3-206ENST00000468179 TDO2P48775 406 aa17.47■□□□□ 0.39
COMMD3-206ENST00000468179 SEPT2Q15019 361 aa17.47■□□□□ 0.39
COMMD3-206ENST00000468179 ZYXQ15942 572 aaKnown RBP17.47■□□□□ 0.39
COMMD3-206ENST00000468179 CHD1LQ86WJ1 897 aa17.47■□□□□ 0.39
COMMD3-206ENST00000468179 LNPKQ9C0E8 428 aa17.47■□□□□ 0.39
COMMD3-206ENST00000468179 CTGFP29279 349 aa17.47■□□□□ 0.39
COMMD3-206ENST00000468179 HERVK_113P62684 666 aa17.47■□□□□ 0.39
COMMD3-206ENST00000468179 ZMYM1Q5SVZ6 1142 aa17.47■□□□□ 0.39
COMMD3-206ENST00000468179 B4GALNT3Q6L9W6 998 aa17.47■□□□□ 0.39
COMMD3-206ENST00000468179 SLC44A5Q8NCS7 719 aa17.47■□□□□ 0.39
COMMD3-206ENST00000468179 GPRC5AQ8NFJ5 357 aa17.47■□□□□ 0.39
COMMD3-206ENST00000468179 SPDYE1Q8NFV5 336 aaPredicted RBP17.47■□□□□ 0.39
COMMD3-206ENST00000468179 ZNF333Q96JL9 665 aa17.47■□□□□ 0.39
COMMD3-206ENST00000468179 P2RX7Q99572 595 aaKnown RBP17.47■□□□□ 0.39
COMMD3-206ENST00000468179 MKNK2Q9HBH9 465 aa17.47■□□□□ 0.39
COMMD3-206ENST00000468179 MORF4L1Q9UBU8 362 aa17.47■□□□□ 0.39
COMMD3-206ENST00000468179 DDX60LQ5H9U9 1706 aaKnown RBP17.46■□□□□ 0.39
COMMD3-206ENST00000468179 LOC285556D6RIA3 1793 aa17.46■□□□□ 0.39
COMMD3-206ENST00000468179 PTPRFP10586 1907 aa17.46■□□□□ 0.39
COMMD3-206ENST00000468179 CYP2D7A0A087X1C5 515 aa17.46■□□□□ 0.38
COMMD3-206ENST00000468179 MINDY4BA8MYZ0 360 aa17.46■□□□□ 0.38
COMMD3-206ENST00000468179 IGHDP01880 384 aa17.46■□□□□ 0.38
COMMD3-206ENST00000468179 SLC3A2P08195 630 aaKnown RBP17.46■□□□□ 0.38
COMMD3-206ENST00000468179 GRK4P32298 578 aa17.46■□□□□ 0.38
COMMD3-206ENST00000468179 GUCY1A2P33402 732 aa17.46■□□□□ 0.38
COMMD3-206ENST00000468179 NUCB1Q02818 461 aa17.46■□□□□ 0.38
COMMD3-206ENST00000468179 CCAR1Q8IX12 1150 aaKnown RBP17.46■□□□□ 0.38
COMMD3-206ENST00000468179 ACER1Q8TDN7 264 aa17.46■□□□□ 0.38
COMMD3-206ENST00000468179 KANSL2Q9H9L4 492 aa17.46■□□□□ 0.38
COMMD3-206ENST00000468179 M0R2C6 588 aa17.45■□□□□ 0.38
COMMD3-206ENST00000468179 VCAM1P19320 739 aa17.45■□□□□ 0.38
COMMD3-206ENST00000468179 UBXN2AP68543 259 aa17.45■□□□□ 0.38
COMMD3-206ENST00000468179 EVX2Q03828 476 aa17.45■□□□□ 0.38
COMMD3-206ENST00000468179 ICA1Q05084 483 aa17.45■□□□□ 0.38
COMMD3-206ENST00000468179 PRKCZQ05513 592 aa17.45■□□□□ 0.38
COMMD3-206ENST00000468179 CATSPERGQ6ZRH7 1159 aa17.45■□□□□ 0.38
COMMD3-206ENST00000468179 IFNL3Q8IZI9 196 aa17.45■□□□□ 0.38
COMMD3-206ENST00000468179 SLAIN1Q8ND83 568 aa17.45■□□□□ 0.38
COMMD3-206ENST00000468179 LPAR1Q92633 364 aa17.45■□□□□ 0.38
COMMD3-206ENST00000468179 BIN2Q9UBW5 565 aaPredicted RBP17.45■□□□□ 0.38
COMMD3-206ENST00000468179 MYH7P12883 1935 aa17.44■□□□□ 0.38
COMMD3-206ENST00000468179 TRIM6-TRIM34B2RNG4 842 aa17.44■□□□□ 0.38
COMMD3-206ENST00000468179 AKR1B1P15121 316 aa17.44■□□□□ 0.38
COMMD3-206ENST00000468179 FXR2P51116 673 aaKnown RBP eCLIP17.44■□□□□ 0.38
COMMD3-206ENST00000468179 CCNA1P78396 465 aa17.44■□□□□ 0.38
COMMD3-206ENST00000468179 IRF5Q13568 498 aa17.44■□□□□ 0.38
COMMD3-206ENST00000468179 PXYLP1Q8TE99 480 aa17.44■□□□□ 0.38
COMMD3-206ENST00000468179 SH3TC2Q8TF17 1288 aa17.44■□□□□ 0.38
COMMD3-206ENST00000468179 NAPBQ9H115 298 aa17.44■□□□□ 0.38
COMMD3-206ENST00000468179 HELLSQ9NRZ9 838 aa17.44■□□□□ 0.38
COMMD3-206ENST00000468179 HOXC10Q9NYD6 342 aa17.44■□□□□ 0.38
COMMD3-206ENST00000468179 TMX2Q9Y320 296 aa17.44■□□□□ 0.38
COMMD3-206ENST00000468179 MAPK4P31152 587 aa17.43■□□□□ 0.38
COMMD3-206ENST00000468179 FLT3LGP49771 235 aa17.43■□□□□ 0.38
COMMD3-206ENST00000468179 ZNF444Q8N0Y2 327 aaPredicted RBP17.43■□□□□ 0.38
COMMD3-206ENST00000468179 OSBPL3Q9H4L5 887 aa17.43■□□□□ 0.38
COMMD3-206ENST00000468179 RPAP3Q9H6T3 665 aaPredicted RBP17.43■□□□□ 0.38
COMMD3-206ENST00000468179 RABGAP1Q9Y3P9 1069 aa17.43■□□□□ 0.38
COMMD3-206ENST00000468179 ROBO3Q96MS0 1386 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms