RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 GJC2Q5T442 439 aaPredicted RBP16.65■□□□□ 0.26
RPP40-204ENST00000468105 FOXP4Q8IVH2 680 aaPredicted RBP16.65■□□□□ 0.26
RPP40-204ENST00000468105 DBNDD2Q9BQY9 259 aa16.65■□□□□ 0.26
RPP40-204ENST00000468105 DHX36Q9H2U1 1008 aaKnown RBP16.65■□□□□ 0.26
RPP40-204ENST00000468105 SEMA6BQ9H3T3 888 aa16.65■□□□□ 0.26
RPP40-204ENST00000468105 ITGB8P26012 769 aa16.64■□□□□ 0.25
RPP40-204ENST00000468105 GUCY1A2P33402 732 aa16.64■□□□□ 0.25
RPP40-204ENST00000468105 NAA16Q6N069 864 aaPredicted RBP16.64■□□□□ 0.25
RPP40-204ENST00000468105 USP17L2Q6R6M4 530 aa16.64■□□□□ 0.25
RPP40-204ENST00000468105 CATSPERGQ6ZRH7 1159 aa16.64■□□□□ 0.25
RPP40-204ENST00000468105 TRMT44Q8IYL2 757 aaKnown RBP16.64■□□□□ 0.25
RPP40-204ENST00000468105 MYLIPQ8WY64 445 aa16.64■□□□□ 0.25
RPP40-204ENST00000468105 C12orf42Q96LP6 360 aa16.64■□□□□ 0.25
RPP40-204ENST00000468105 TRIM43BA6NCK2 446 aa16.63■□□□□ 0.25
RPP40-204ENST00000468105 HOXC6P09630 235 aa16.63■□□□□ 0.25
RPP40-204ENST00000468105 CYBAP13498 195 aa16.63■□□□□ 0.25
RPP40-204ENST00000468105 EPHB4P54760 987 aa16.63■□□□□ 0.25
RPP40-204ENST00000468105 GRB14Q14449 540 aa16.63■□□□□ 0.25
RPP40-204ENST00000468105 TATDN1Q6P1N9 297 aa16.63■□□□□ 0.25
RPP40-204ENST00000468105 LPAR1Q92633 364 aa16.63■□□□□ 0.25
RPP40-204ENST00000468105 TRIM43Q96BQ3 446 aaPredicted RBP16.63■□□□□ 0.25
RPP40-204ENST00000468105 API5Q9BZZ5 524 aaKnown RBP16.63■□□□□ 0.25
RPP40-204ENST00000468105 RABGAP1Q9Y3P9 1069 aa16.63■□□□□ 0.25
RPP40-204ENST00000468105 SPDYE16A6NNV3 312 aaPredicted RBP16.62■□□□□ 0.25
RPP40-204ENST00000468105 VCAM1P19320 739 aa16.62■□□□□ 0.25
RPP40-204ENST00000468105 CNGA1P29973 690 aa16.62■□□□□ 0.25
RPP40-204ENST00000468105 ZAP70P43403 619 aa16.62■□□□□ 0.25
RPP40-204ENST00000468105 KIAA1755Q5JYT7 1200 aa16.62■□□□□ 0.25
RPP40-204ENST00000468105 PRAMEF19Q5SWL8 479 aa16.62■□□□□ 0.25
RPP40-204ENST00000468105 GORABQ5T7V8 394 aa16.62■□□□□ 0.25
RPP40-204ENST00000468105 SLC39A5Q6ZMH5 540 aa16.62■□□□□ 0.25
RPP40-204ENST00000468105 CRACR2BQ8N4Y2 399 aaPredicted RBP16.62■□□□□ 0.25
RPP40-204ENST00000468105 BADQ92934 168 aa16.62■□□□□ 0.25
RPP40-204ENST00000468105 TLR7Q9NYK1 1049 aaKnown RBP16.62■□□□□ 0.25
RPP40-204ENST00000468105 ATP11BQ9Y2G3 1177 aa16.62■□□□□ 0.25
RPP40-204ENST00000468105 SUPT16HQ9Y5B9 1047 aaKnown RBP16.62■□□□□ 0.25
RPP40-204ENST00000468105 MYH1P12882 1939 aa16.62■□□□□ 0.25
RPP40-204ENST00000468105 SLC15A5A6NIM6 579 aa16.61■□□□□ 0.25
RPP40-204ENST00000468105 USP17L15C9J2P7 530 aa16.61■□□□□ 0.25
RPP40-204ENST00000468105 USP17L13C9JLJ4 530 aa16.61■□□□□ 0.25
RPP40-204ENST00000468105 USP17L11C9JVI0 530 aa16.61■□□□□ 0.25
RPP40-204ENST00000468105 USP17L18D6R9N7 530 aa16.61■□□□□ 0.25
RPP40-204ENST00000468105 USP17L22D6RA61 530 aa16.61■□□□□ 0.25
RPP40-204ENST00000468105 USP17L17D6RBQ6 530 aa16.61■□□□□ 0.25
RPP40-204ENST00000468105 USP17L19D6RCP7 530 aa16.61■□□□□ 0.25
RPP40-204ENST00000468105 USP17L20D6RJB6 530 aa16.61■□□□□ 0.25
RPP40-204ENST00000468105 DNM1LO00429 736 aa16.61■□□□□ 0.25
RPP40-204ENST00000468105 BCAR3O75815 825 aa16.61■□□□□ 0.25
RPP40-204ENST00000468105 USP17L24Q0WX57 530 aa16.61■□□□□ 0.25
RPP40-204ENST00000468105 TRIM60Q495X7 471 aa16.61■□□□□ 0.25
RPP40-204ENST00000468105 ZNF697Q5TEC3 545 aa16.61■□□□□ 0.25
RPP40-204ENST00000468105 MAFAQ8NHW3 353 aaPredicted RBP16.61■□□□□ 0.25
RPP40-204ENST00000468105 LBHD1Q9BQE6 289 aaPredicted RBP16.61■□□□□ 0.25
RPP40-204ENST00000468105 A0A1W2PRG0 241 aa16.6■□□□□ 0.25
RPP40-204ENST00000468105 COBLO75128 1261 aa16.6■□□□□ 0.25
RPP40-204ENST00000468105 UQCRFS1P1P0C7P4 283 aa16.6■□□□□ 0.25
RPP40-204ENST00000468105 RRP1P56182 461 aaKnown RBP16.6■□□□□ 0.25
RPP40-204ENST00000468105 WDR78Q5VTH9 848 aa16.6■□□□□ 0.25
RPP40-204ENST00000468105 MFSD14CQ5VZR4 134 aa16.6■□□□□ 0.25
RPP40-204ENST00000468105 MIGA1Q8NAN2 632 aa16.6■□□□□ 0.25
RPP40-204ENST00000468105 USP38Q8NB14 1042 aa16.6■□□□□ 0.25
RPP40-204ENST00000468105 PDLIM7Q9NR12 457 aa16.6■□□□□ 0.25
RPP40-204ENST00000468105 BAG3O95817 575 aa16.59■□□□□ 0.25
RPP40-204ENST00000468105 SHMT1P34896 483 aa16.59■□□□□ 0.25
RPP40-204ENST00000468105 PLCD1P51178 756 aa16.59■□□□□ 0.25
RPP40-204ENST00000468105 ATP2B2Q01814 1243 aa16.59■□□□□ 0.25
RPP40-204ENST00000468105 SNX17Q15036 470 aa16.59■□□□□ 0.25
RPP40-204ENST00000468105 TNNI3KQ59H18 835 aa16.59■□□□□ 0.25
RPP40-204ENST00000468105 LBX2Q6XYB7 198 aa16.59■□□□□ 0.25
RPP40-204ENST00000468105 CCAR1Q8IX12 1150 aaKnown RBP16.59■□□□□ 0.25
RPP40-204ENST00000468105 FERMT2Q96AC1 680 aa16.59■□□□□ 0.25
RPP40-204ENST00000468105 ANTXR1Q9H6X2 564 aa16.59■□□□□ 0.25
RPP40-204ENST00000468105 PRDM6Q9NQX0 595 aa16.59■□□□□ 0.25
RPP40-204ENST00000468105 GINM1Q9NU53 330 aa16.59■□□□□ 0.25
RPP40-204ENST00000468105 FPGT-TNNI3KV9GXZ4 949 aa16.59■□□□□ 0.25
RPP40-204ENST00000468105 IPO8O15397 1037 aaKnown RBP16.58■□□□□ 0.24
RPP40-204ENST00000468105 RAB3GAP1Q15042 981 aa16.58■□□□□ 0.24
RPP40-204ENST00000468105 GTF3C2Q8WUA4 911 aaPredicted RBP16.58■□□□□ 0.24
RPP40-204ENST00000468105 ARHGAP45Q92619 1136 aa16.58■□□□□ 0.24
RPP40-204ENST00000468105 MOV10L1Q9BXT6 1211 aaKnown RBP16.58■□□□□ 0.24
RPP40-204ENST00000468105 KIAA1683Q9H0B3 1180 aa16.58■□□□□ 0.24
RPP40-204ENST00000468105 RPAP3Q9H6T3 665 aaPredicted RBP16.58■□□□□ 0.24
RPP40-204ENST00000468105 RAPGEFL1Q9UHV5 662 aa16.58■□□□□ 0.24
RPP40-204ENST00000468105 DBNLQ9UJU6 430 aaKnown RBP16.58■□□□□ 0.24
RPP40-204ENST00000468105 SMCHD1A6NHR9 2005 aa16.58■□□□□ 0.24
RPP40-204ENST00000468105 CHD9Q3L8U1 2897 aa16.57■□□□□ 0.24
RPP40-204ENST00000468105 A0A0G2JMZ2 1700 aa16.57■□□□□ 0.24
RPP40-204ENST00000468105 GNAI3P08754 354 aa16.57■□□□□ 0.24
RPP40-204ENST00000468105 TRIM27P14373 513 aa16.57■□□□□ 0.24
RPP40-204ENST00000468105 CYP7A1P22680 504 aa16.57■□□□□ 0.24
RPP40-204ENST00000468105 ADORA2AP29274 412 aa16.57■□□□□ 0.24
RPP40-204ENST00000468105 ADCYAP1R1P41586 468 aa16.57■□□□□ 0.24
RPP40-204ENST00000468105 POLA2Q14181 598 aa16.57■□□□□ 0.24
RPP40-204ENST00000468105 TTC39AQ5SRH9 613 aa16.57■□□□□ 0.24
RPP40-204ENST00000468105 PRDM5Q9NQX1 630 aaPredicted RBP16.57■□□□□ 0.24
RPP40-204ENST00000468105 ZNF236Q9UL36 1845 aa16.56■□□□□ 0.24
RPP40-204ENST00000468105 SMIM22K7EJ46 135 aa16.56■□□□□ 0.24
RPP40-204ENST00000468105 PLCG2P16885 1265 aa16.56■□□□□ 0.24
RPP40-204ENST00000468105 G3BP1Q13283 466 aaKnown RBP eCLIP16.56■□□□□ 0.24
RPP40-204ENST00000468105 SEPT2Q15019 361 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms