RNA–Protein interactions for RNA: ENST00000467853.5

PSMD6-204, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best)

Gene PSMD6, Length 4,583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-204ENST00000467853 TAOK2Q9UL54 1235 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 RIPOR2Q9Y4F9 1068 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 RANBP6O60518 1105 aaKnown RBP7.18□□□□□ -1.26
PSMD6-204ENST00000467853 SASH3O75995 380 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 RXRAP19793 462 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 PUM3Q15397 648 aaKnown RBP7.18□□□□□ -1.26
PSMD6-204ENST00000467853 CRACR2BQ8N4Y2 399 aaPredicted RBP7.18□□□□□ -1.26
PSMD6-204ENST00000467853 DESI2Q9BSY9 194 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 EFCC1Q9HA90 598 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 SAMSN1Q9NSI8 373 aaKnown RBP7.18□□□□□ -1.26
PSMD6-204ENST00000467853 VPS18Q9P253 973 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 N4BP3O15049 544 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 RPS6KA5O75582 802 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 CAPN2P17655 700 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 FECHP22830 423 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 ITGA6P23229 1130 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 STIM1Q13586 685 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 NKX1-1Q15270 411 aaPredicted RBP7.18□□□□□ -1.26
PSMD6-204ENST00000467853 TRMT44Q8IYL2 757 aaKnown RBP7.18□□□□□ -1.26
PSMD6-204ENST00000467853 CCDC47Q96A33 483 aaKnown RBP7.18□□□□□ -1.26
PSMD6-204ENST00000467853 ADD3Q9UEY8 706 aaKnown RBP7.18□□□□□ -1.26
PSMD6-204ENST00000467853 SOWAHDA6NJG2 315 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 PDE8BO95263 885 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 KRT83P78385 493 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 SCARF1Q14162 830 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 MCM6Q14566 821 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 BEND6Q5SZJ8 279 aaPredicted RBP7.18□□□□□ -1.26
PSMD6-204ENST00000467853 CDKAL1Q5VV42 579 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 CHADLQ6NUI6 762 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 ESR2Q92731 530 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 CCDC102AQ96A19 550 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 NUP88Q99567 741 aaPredicted RBP7.18□□□□□ -1.26
PSMD6-204ENST00000467853 CSRNP2Q9H175 543 aa7.18□□□□□ -1.26
PSMD6-204ENST00000467853 LIMA1Q9UHB6 759 aaKnown RBP7.18□□□□□ -1.26
PSMD6-204ENST00000467853 PUF60Q9UHX1 559 aaKnown RBP7.18□□□□□ -1.26
PSMD6-204ENST00000467853 PCP11498 1178 aaKnown RBP7.17□□□□□ -1.26
PSMD6-204ENST00000467853 BMP6P22004 513 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 KLHL10Q6JEL2 608 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 FANCBQ8NB91 859 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 NOC3LQ8WTT2 800 aaKnown RBP7.17□□□□□ -1.26
PSMD6-204ENST00000467853 CPLX3Q8WVH0 158 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 HAUS4Q9H6D7 363 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 MRPL44Q9H9J2 332 aaKnown RBP7.17□□□□□ -1.26
PSMD6-204ENST00000467853 ZNHIT6Q9NWK9 470 aaKnown RBP7.17□□□□□ -1.26
PSMD6-204ENST00000467853 ZSWIM5Q9P217 1185 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 RWDD2AQ9UIY3 292 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 PNPLA7Q6ZV29 1317 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 GTF2E1P29083 439 aaPredicted RBP7.17□□□□□ -1.26
PSMD6-204ENST00000467853 TRAPPC10P48553 1259 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 CTSWP56202 376 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 RRP12Q5JTH9 1297 aaKnown RBP7.17□□□□□ -1.26
PSMD6-204ENST00000467853 IQCDQ96DY2 449 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 NBPF3Q9H094 633 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 PDE11AQ9HCR9 933 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 CABP5Q9NP86 173 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 PIH1D3Q9NQM4 214 aaKnown RBP7.17□□□□□ -1.26
PSMD6-204ENST00000467853 STRN4Q9NRL3 753 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 FAM217BQ9NTX9 383 aaPredicted RBP7.17□□□□□ -1.26
PSMD6-204ENST00000467853 FEZ2Q9UHY8 353 aaPredicted RBP7.17□□□□□ -1.26
PSMD6-204ENST00000467853 MYO6Q9UM54 1294 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 PDE8AO60658 829 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 PBX1P40424 430 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 TOB1P50616 345 aaPredicted RBP7.17□□□□□ -1.26
PSMD6-204ENST00000467853 ST5P78524 1137 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 HSP90AA4PQ58FG1 418 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 SPECC1Q5M775 1068 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 WDR93Q6P2C0 686 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 CATIPQ7Z7H3 387 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 NUP133Q8WUM0 1156 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 PAGE5Q96GU1 130 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 MAGEC2Q9UBF1 373 aaPredicted RBP7.17□□□□□ -1.26
PSMD6-204ENST00000467853 L1RE1Q9UN81 338 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 KCNJ14Q9UNX9 436 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 ZNF330Q9Y3S2 320 aaPredicted RBP7.17□□□□□ -1.26
PSMD6-204ENST00000467853 TNS3Q68CZ2 1445 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 A6NNZ2 444 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 FOXN1O15353 648 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 GTPBP6O43824 516 aaPredicted RBP7.17□□□□□ -1.26
PSMD6-204ENST00000467853 MBD4O95243 580 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 ATP2B1P20020 1258 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 SF3B2Q13435 895 aaKnown RBP7.17□□□□□ -1.26
PSMD6-204ENST00000467853 TUBB8Q3ZCM7 444 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 GIGYF2Q6Y7W6 1299 aaKnown RBP7.17□□□□□ -1.26
PSMD6-204ENST00000467853 SH3RF1Q7Z6J0 888 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 ZNF654Q8IZM8 581 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 SLC35F6Q8N357 371 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 SPATA5Q8NB90 893 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 TMOD3Q9NYL9 352 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 PCDHB6Q9Y5E3 794 aa7.17□□□□□ -1.26
PSMD6-204ENST00000467853 RIC1Q4ADV7 1423 aa7.16□□□□□ -1.26
PSMD6-204ENST00000467853 UBR2Q8IWV8 1755 aa7.16□□□□□ -1.26
PSMD6-204ENST00000467853 H7C1D1 291 aa7.16□□□□□ -1.26
PSMD6-204ENST00000467853 PRPF3O43395 683 aaKnown RBP7.16□□□□□ -1.26
PSMD6-204ENST00000467853 CASP14P31944 242 aa7.16□□□□□ -1.26
PSMD6-204ENST00000467853 PPP1R2P41236 205 aa7.16□□□□□ -1.26
PSMD6-204ENST00000467853 AFMP43652 599 aa7.16□□□□□ -1.26
PSMD6-204ENST00000467853 PAK1Q13153 545 aa7.16□□□□□ -1.26
PSMD6-204ENST00000467853 CUL4BQ13620 913 aa7.16□□□□□ -1.26
PSMD6-204ENST00000467853 RRAGBQ5VZM2 374 aa7.16□□□□□ -1.26
PSMD6-204ENST00000467853 RAD9BQ6WBX8 426 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 333.3 ms