RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 GPATCH3Q96I76 525 aa12.52□□□□□ -0.41
SSR3-205ENST00000467789 BOLA2Q9H3K6 86 aa12.52□□□□□ -0.41
SSR3-205ENST00000467789 OCEL1Q9H607 264 aa12.52□□□□□ -0.41
SSR3-205ENST00000467789 MYPNQ86TC9 1320 aa12.52□□□□□ -0.41
SSR3-205ENST00000467789 GDF11O95390 407 aa12.51□□□□□ -0.41
SSR3-205ENST00000467789 CAPN2P17655 700 aa12.51□□□□□ -0.41
SSR3-205ENST00000467789 CTGFP29279 349 aa12.51□□□□□ -0.41
SSR3-205ENST00000467789 GRK4P32298 578 aa12.51□□□□□ -0.41
SSR3-205ENST00000467789 ADD2P35612 726 aa12.51□□□□□ -0.41
SSR3-205ENST00000467789 IRX5P78411 483 aaPredicted RBP12.51□□□□□ -0.41
SSR3-205ENST00000467789 MTMR2Q13614 643 aa12.51□□□□□ -0.41
SSR3-205ENST00000467789 UBE3CQ15386 1083 aa12.51□□□□□ -0.41
SSR3-205ENST00000467789 CERKLQ49MI3 558 aaPredicted RBP12.51□□□□□ -0.41
SSR3-205ENST00000467789 SLAIN1Q8ND83 568 aa12.51□□□□□ -0.41
SSR3-205ENST00000467789 GTF3C2Q8WUA4 911 aaPredicted RBP12.51□□□□□ -0.41
SSR3-205ENST00000467789 ASCC2Q9H1I8 757 aaPredicted RBP12.51□□□□□ -0.41
SSR3-205ENST00000467789 CABP5Q9NP86 173 aa12.51□□□□□ -0.41
SSR3-205ENST00000467789 ATP8A2Q9NTI2 1148 aa12.51□□□□□ -0.41
SSR3-205ENST00000467789 ECHDC1Q9NTX5 307 aa12.51□□□□□ -0.41
SSR3-205ENST00000467789 METRNQ9UJH8 293 aa12.51□□□□□ -0.41
SSR3-205ENST00000467789 POTEFA5A3E0 1075 aa12.5□□□□□ -0.41
SSR3-205ENST00000467789 TNPO2O14787 897 aaKnown RBP12.5□□□□□ -0.41
SSR3-205ENST00000467789 POLR3DP05423 398 aaPredicted RBP12.5□□□□□ -0.41
SSR3-205ENST00000467789 USP14P54578 494 aa12.5□□□□□ -0.41
SSR3-205ENST00000467789 IRX3P78415 501 aaPredicted RBP12.5□□□□□ -0.41
SSR3-205ENST00000467789 IRF5Q13568 498 aa12.5□□□□□ -0.41
SSR3-205ENST00000467789 SLC4A8Q2Y0W8 1093 aa12.5□□□□□ -0.41
SSR3-205ENST00000467789 USP17L2Q6R6M4 530 aa12.5□□□□□ -0.41
SSR3-205ENST00000467789 AMOTL1Q8IY63 956 aa12.5□□□□□ -0.41
SSR3-205ENST00000467789 ANKRD13CQ8N6S4 541 aa12.5□□□□□ -0.41
SSR3-205ENST00000467789 SPRYD3Q8NCJ5 442 aa12.5□□□□□ -0.41
SSR3-205ENST00000467789 NKX2-3Q8TAU0 364 aa12.5□□□□□ -0.41
SSR3-205ENST00000467789 PXYLP1Q8TE99 480 aa12.5□□□□□ -0.41
SSR3-205ENST00000467789 COA7Q96BR5 231 aa12.5□□□□□ -0.41
SSR3-205ENST00000467789 DDRGK1Q96HY6 314 aa12.5□□□□□ -0.41
SSR3-205ENST00000467789 MFRPQ9BY79 579 aa12.5□□□□□ -0.41
SSR3-205ENST00000467789 DCP1AQ9NPI6 582 aaPredicted RBP12.5□□□□□ -0.41
SSR3-205ENST00000467789 MCM9Q9NXL9 1143 aa12.5□□□□□ -0.41
SSR3-205ENST00000467789 GH2P01242 217 aa12.49□□□□□ -0.41
SSR3-205ENST00000467789 PLCD1P51178 756 aa12.49□□□□□ -0.41
SSR3-205ENST00000467789 RRP1P56182 461 aaKnown RBP12.49□□□□□ -0.41
SSR3-205ENST00000467789 UBXN2AP68543 259 aa12.49□□□□□ -0.41
SSR3-205ENST00000467789 JAG1P78504 1218 aa12.49□□□□□ -0.41
SSR3-205ENST00000467789 PRKCZQ05513 592 aa12.49□□□□□ -0.41
SSR3-205ENST00000467789 GABPAQ06546 454 aa12.49□□□□□ -0.41
SSR3-205ENST00000467789 ABCB5Q2M3G0 1257 aa12.49□□□□□ -0.41
SSR3-205ENST00000467789 PRPF38BQ5VTL8 546 aaKnown RBP12.49□□□□□ -0.41
SSR3-205ENST00000467789 SH3TC2Q8TF17 1288 aa12.49□□□□□ -0.41
SSR3-205ENST00000467789 C12orf42Q96LP6 360 aa12.49□□□□□ -0.41
SSR3-205ENST00000467789 BCL11AQ9H165 835 aa12.49□□□□□ -0.41
SSR3-205ENST00000467789 MORF4L1Q9UBU8 362 aa12.49□□□□□ -0.41
SSR3-205ENST00000467789 SWAP70Q9UH65 585 aa12.49□□□□□ -0.41
SSR3-205ENST00000467789 SHMT1P34896 483 aa12.48□□□□□ -0.41
SSR3-205ENST00000467789 AAMPQ13685 434 aa12.48□□□□□ -0.41
SSR3-205ENST00000467789 LRRFIP1Q32MZ4 808 aaKnown RBP12.48□□□□□ -0.41
SSR3-205ENST00000467789 LCORLQ8N3X6 602 aa12.48□□□□□ -0.41
SSR3-205ENST00000467789 EDC3Q96F86 508 aaKnown RBP12.48□□□□□ -0.41
SSR3-205ENST00000467789 FEZ1Q99689 392 aa12.48□□□□□ -0.41
SSR3-205ENST00000467789 KIAA1683Q9H0B3 1180 aa12.48□□□□□ -0.41
SSR3-205ENST00000467789 MYH8P13535 1937 aa12.48□□□□□ -0.41
SSR3-205ENST00000467789 BRCA2P51587 3418 aa12.47□□□□□ -0.41
SSR3-205ENST00000467789 TTC41PQ6P2S7 1318 aa12.47□□□□□ -0.41
SSR3-205ENST00000467789 SMARCA5O60264 1052 aaPredicted RBP12.47□□□□□ -0.41
SSR3-205ENST00000467789 ADCY3O60266 1144 aa12.47□□□□□ -0.41
SSR3-205ENST00000467789 MBD4O95243 580 aa12.47□□□□□ -0.41
SSR3-205ENST00000467789 ZFYP08048 801 aaPredicted RBP12.47□□□□□ -0.41
SSR3-205ENST00000467789 EN2P19622 333 aaPredicted RBP12.47□□□□□ -0.41
SSR3-205ENST00000467789 FLT3LGP49771 235 aa12.47□□□□□ -0.41
SSR3-205ENST00000467789 HERVK_113P62684 666 aa12.47□□□□□ -0.41
SSR3-205ENST00000467789 RAB3GAP1Q15042 981 aa12.47□□□□□ -0.41
SSR3-205ENST00000467789 KBTBD3Q8NAB2 608 aa12.47□□□□□ -0.41
SSR3-205ENST00000467789 SDR42E1Q8WUS8 393 aa12.47□□□□□ -0.41
SSR3-205ENST00000467789 ARMT1Q9H993 441 aa12.47□□□□□ -0.41
SSR3-205ENST00000467789 EMILIN3Q9NT22 766 aa12.47□□□□□ -0.41
SSR3-205ENST00000467789 BIN2Q9UBW5 565 aaPredicted RBP12.47□□□□□ -0.41
SSR3-205ENST00000467789 DOCK3Q8IZD9 2030 aa12.47□□□□□ -0.41
SSR3-205ENST00000467789 USP17L15C9J2P7 530 aa12.46□□□□□ -0.41
SSR3-205ENST00000467789 USP17L13C9JLJ4 530 aa12.46□□□□□ -0.41
SSR3-205ENST00000467789 USP17L11C9JVI0 530 aa12.46□□□□□ -0.41
SSR3-205ENST00000467789 USP17L18D6R9N7 530 aa12.46□□□□□ -0.41
SSR3-205ENST00000467789 USP17L22D6RA61 530 aa12.46□□□□□ -0.41
SSR3-205ENST00000467789 USP17L17D6RBQ6 530 aa12.46□□□□□ -0.41
SSR3-205ENST00000467789 USP17L19D6RCP7 530 aa12.46□□□□□ -0.41
SSR3-205ENST00000467789 USP17L20D6RJB6 530 aa12.46□□□□□ -0.41
SSR3-205ENST00000467789 ERC2O15083 957 aa12.46□□□□□ -0.41
SSR3-205ENST00000467789 GJB1P08034 283 aa12.46□□□□□ -0.41
SSR3-205ENST00000467789 USP17L24Q0WX57 530 aa12.46□□□□□ -0.41
SSR3-205ENST00000467789 TMEM179Q6ZVK1 233 aa12.46□□□□□ -0.41
SSR3-205ENST00000467789 FBXO22Q8NEZ5 403 aa12.46□□□□□ -0.41
SSR3-205ENST00000467789 GPRC5AQ8NFJ5 357 aa12.46□□□□□ -0.41
SSR3-205ENST00000467789 CCDC17Q96LX7 622 aa12.46□□□□□ -0.41
SSR3-205ENST00000467789 P2RX7Q99572 595 aaKnown RBP12.46□□□□□ -0.41
SSR3-205ENST00000467789 GABRQQ9UN88 632 aa12.46□□□□□ -0.41
SSR3-205ENST00000467789 BAZ2AQ9UIF9 1905 aaKnown RBP12.46□□□□□ -0.42
SSR3-205ENST00000467789 MKI67P46013 3256 aaKnown RBP12.45□□□□□ -0.42
SSR3-205ENST00000467789 MAPK4P31152 587 aa12.45□□□□□ -0.42
SSR3-205ENST00000467789 GJA8P48165 433 aa12.45□□□□□ -0.42
SSR3-205ENST00000467789 SHROOM1Q2M3G4 852 aaPredicted RBP12.45□□□□□ -0.42
SSR3-205ENST00000467789 C12orf60Q5U649 245 aa12.45□□□□□ -0.42
SSR3-205ENST00000467789 GIMAP6Q6P9H5 292 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms