RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 AP4E1Q9UPM8 1137 aa6.39□□□□□ -1.39
SSR3-204ENST00000467733 NPHP3Q7Z494 1330 aa6.39□□□□□ -1.39
SSR3-204ENST00000467733 DISP2A7MBM2 1401 aa6.39□□□□□ -1.39
SSR3-204ENST00000467733 CLTCL1P53675 1640 aa6.39□□□□□ -1.39
SSR3-204ENST00000467733 A0A096LPE4 126 aa6.38□□□□□ -1.39
SSR3-204ENST00000467733 A0A1W2PPZ6 126 aa6.38□□□□□ -1.39
SSR3-204ENST00000467733 FAM13AO94988 1023 aa6.38□□□□□ -1.39
SSR3-204ENST00000467733 ZNF792Q3KQV3 632 aa6.38□□□□□ -1.39
SSR3-204ENST00000467733 GSX1Q9H4S2 264 aaPredicted RBP6.38□□□□□ -1.39
SSR3-204ENST00000467733 FAM105AQ9NUU6 356 aa6.38□□□□□ -1.39
SSR3-204ENST00000467733 ROBO2Q9HCK4 1378 aa6.38□□□□□ -1.39
SSR3-204ENST00000467733 HFM1A2PYH4 1435 aa6.38□□□□□ -1.39
SSR3-204ENST00000467733 FMN2Q9NZ56 1722 aa6.38□□□□□ -1.39
SSR3-204ENST00000467733 NUP188Q5SRE5 1749 aa6.37□□□□□ -1.39
SSR3-204ENST00000467733 THSD7AQ9UPZ6 1657 aa6.37□□□□□ -1.39
SSR3-204ENST00000467733 SYNGAP1Q96PV0 1343 aa6.37□□□□□ -1.39
SSR3-204ENST00000467733 METTL12A8MUP2 240 aa6.37□□□□□ -1.39
SSR3-204ENST00000467733 NPR3P17342 541 aa6.37□□□□□ -1.39
SSR3-204ENST00000467733 ASPAP45381 313 aa6.37□□□□□ -1.39
SSR3-204ENST00000467733 CYP27C1Q4G0S4 372 aa6.37□□□□□ -1.39
SSR3-204ENST00000467733 OGFOD3Q6PK18 319 aa6.37□□□□□ -1.39
SSR3-204ENST00000467733 CCNJLQ8IV13 435 aa6.37□□□□□ -1.39
SSR3-204ENST00000467733 ZFYVE28Q9HCC9 887 aa6.37□□□□□ -1.39
SSR3-204ENST00000467733 DAGLAQ9Y4D2 1042 aa6.37□□□□□ -1.39
SSR3-204ENST00000467733 PPLO60437 1756 aa6.36□□□□□ -1.39
SSR3-204ENST00000467733 DBX1A6NMT0 343 aa6.36□□□□□ -1.39
SSR3-204ENST00000467733 FARP2O94887 1054 aaPredicted RBP6.36□□□□□ -1.39
SSR3-204ENST00000467733 PKN1Q16512 942 aa6.36□□□□□ -1.39
SSR3-204ENST00000467733 ZNF423Q2M1K9 1284 aa6.36□□□□□ -1.39
SSR3-204ENST00000467733 SEZ6L2Q6UXD5 910 aa6.36□□□□□ -1.39
SSR3-204ENST00000467733 KRT27Q7Z3Y8 459 aa6.36□□□□□ -1.39
SSR3-204ENST00000467733 ATG4DQ86TL0 474 aaPredicted RBP6.36□□□□□ -1.39
SSR3-204ENST00000467733 GJD3Q8N144 294 aa6.36□□□□□ -1.39
SSR3-204ENST00000467733 C1GALT1Q9NS00 363 aa6.36□□□□□ -1.39
SSR3-204ENST00000467733 MTMR7Q9Y216 660 aa6.36□□□□□ -1.39
SSR3-204ENST00000467733 CHD4Q14839 1912 aa6.36□□□□□ -1.39
SSR3-204ENST00000467733 KNDC1Q76NI1 1749 aa6.36□□□□□ -1.39
SSR3-204ENST00000467733 IFT172Q9UG01 1749 aa6.36□□□□□ -1.39
SSR3-204ENST00000467733 UTRNP46939 3433 aa6.35□□□□□ -1.39
SSR3-204ENST00000467733 CCDC144AA2RUR9 1427 aa6.35□□□□□ -1.39
SSR3-204ENST00000467733 LRPPRCP42704 1394 aaKnown RBP6.35□□□□□ -1.39
SSR3-204ENST00000467733 B3GALT4O96024 378 aa6.35□□□□□ -1.39
SSR3-204ENST00000467733 CTSBP07858 339 aa6.35□□□□□ -1.39
SSR3-204ENST00000467733 PDE4CQ08493 712 aa6.35□□□□□ -1.39
SSR3-204ENST00000467733 R3HDM1Q15032 1099 aaKnown RBP6.35□□□□□ -1.39
SSR3-204ENST00000467733 VPS72Q15906 364 aa6.35□□□□□ -1.39
SSR3-204ENST00000467733 ZNF648Q5T619 568 aaPredicted RBP6.35□□□□□ -1.39
SSR3-204ENST00000467733 ZNF574Q6ZN55 896 aaPredicted RBP6.35□□□□□ -1.39
SSR3-204ENST00000467733 LIN7BQ9HAP6 207 aa6.35□□□□□ -1.39
SSR3-204ENST00000467733 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.35□□□□□ -1.39
SSR3-204ENST00000467733 CAMTA1Q9Y6Y1 1673 aa6.35□□□□□ -1.39
SSR3-204ENST00000467733 RGPD8O14715 1765 aaPredicted RBP6.34□□□□□ -1.39
SSR3-204ENST00000467733 HNRNPUQ00839 825 aaKnown RBP eCLIP6.34□□□□□ -1.39
SSR3-204ENST00000467733 WFDC3Q8IUB2 231 aa6.34□□□□□ -1.39
SSR3-204ENST00000467733 NETO1Q8TDF5 533 aa6.34□□□□□ -1.39
SSR3-204ENST00000467733 TCF12Q99081 682 aa6.34□□□□□ -1.39
SSR3-204ENST00000467733 TRIM56Q9BRZ2 755 aaKnown RBP6.34□□□□□ -1.39
SSR3-204ENST00000467733 COL14A1Q05707 1796 aaKnown RBP6.34□□□□□ -1.4
SSR3-204ENST00000467733 NAIPQ13075 1403 aa6.33□□□□□ -1.4
SSR3-204ENST00000467733 TNS3Q68CZ2 1445 aa6.33□□□□□ -1.4
SSR3-204ENST00000467733 ROCK1Q13464 1354 aa6.33□□□□□ -1.4
SSR3-204ENST00000467733 NINLQ9Y2I6 1382 aa6.33□□□□□ -1.4
SSR3-204ENST00000467733 SPATA31A3Q5VYP0 1347 aa6.33□□□□□ -1.4
SSR3-204ENST00000467733 A0A1W2PP55 124 aa6.33□□□□□ -1.4
SSR3-204ENST00000467733 FZD6O60353 706 aa6.33□□□□□ -1.4
SSR3-204ENST00000467733 AOC2O75106 756 aa6.33□□□□□ -1.4
SSR3-204ENST00000467733 FUT4P22083 530 aa6.33□□□□□ -1.4
SSR3-204ENST00000467733 GRIA4P48058 902 aa6.33□□□□□ -1.4
SSR3-204ENST00000467733 XPCQ01831 940 aaPredicted RBP6.33□□□□□ -1.4
SSR3-204ENST00000467733 AP3B2Q13367 1082 aa6.33□□□□□ -1.4
SSR3-204ENST00000467733 MTMR3Q13615 1198 aa6.33□□□□□ -1.4
SSR3-204ENST00000467733 ZNF326Q5BKZ1 582 aaKnown RBP6.33□□□□□ -1.4
SSR3-204ENST00000467733 SPRED2Q7Z698 418 aa6.33□□□□□ -1.4
SSR3-204ENST00000467733 GALNT12Q8IXK2 581 aa6.33□□□□□ -1.4
SSR3-204ENST00000467733 FAM168AQ92567 244 aa6.33□□□□□ -1.4
SSR3-204ENST00000467733 RC3H2Q9HBD1 1191 aaKnown RBP6.33□□□□□ -1.4
SSR3-204ENST00000467733 CRYBG1Q9Y4K1 1723 aa6.33□□□□□ -1.4
SSR3-204ENST00000467733 NUP155O75694 1391 aa6.32□□□□□ -1.4
SSR3-204ENST00000467733 PARD3Q8TEW0 1356 aa6.32□□□□□ -1.4
SSR3-204ENST00000467733 DYNC1LI2O43237 492 aaPredicted RBP6.32□□□□□ -1.4
SSR3-204ENST00000467733 SSFA2P28290 1259 aa6.32□□□□□ -1.4
SSR3-204ENST00000467733 PDE3AQ14432 1141 aa6.32□□□□□ -1.4
SSR3-204ENST00000467733 SPRED3Q2MJR0 410 aa6.32□□□□□ -1.4
SSR3-204ENST00000467733 KSR1Q8IVT5 923 aa6.32□□□□□ -1.4
SSR3-204ENST00000467733 GLIS3Q8NEA6 775 aa6.32□□□□□ -1.4
SSR3-204ENST00000467733 TMEM40Q8WWA1 233 aa6.32□□□□□ -1.4
SSR3-204ENST00000467733 WDR18Q9BV38 432 aa6.32□□□□□ -1.4
SSR3-204ENST00000467733 VAV3Q9UKW4 847 aa6.32□□□□□ -1.4
SSR3-204ENST00000467733 USTQ9Y2C2 406 aa6.32□□□□□ -1.4
SSR3-204ENST00000467733 TECPR2O15040 1411 aa6.32□□□□□ -1.4
SSR3-204ENST00000467733 RGPD3A6NKT7 1758 aaPredicted RBP6.31□□□□□ -1.4
SSR3-204ENST00000467733 RGPD4Q7Z3J3 1758 aa6.31□□□□□ -1.4
SSR3-204ENST00000467733 TRPM3Q9HCF6 1732 aaPredicted RBP6.31□□□□□ -1.4
SSR3-204ENST00000467733 ALS2Q96Q42 1657 aa6.31□□□□□ -1.4
SSR3-204ENST00000467733 POLR3DP05423 398 aaPredicted RBP6.31□□□□□ -1.4
SSR3-204ENST00000467733 NEFLP07196 543 aa6.31□□□□□ -1.4
SSR3-204ENST00000467733 ITPKAP23677 461 aa6.31□□□□□ -1.4
SSR3-204ENST00000467733 PRKCQQ04759 706 aa6.31□□□□□ -1.4
SSR3-204ENST00000467733 ZNF124Q15973 351 aa6.31□□□□□ -1.4
SSR3-204ENST00000467733 FBLN7Q53RD9 439 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms