RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 CTCFLQ8NI51 663 aaPredicted RBP21.81■■□□□ 1.08
CHRNA4-203ENST00000467563 LEO1Q8WVC0 666 aaPredicted RBP21.81■■□□□ 1.08
CHRNA4-203ENST00000467563 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.81■■□□□ 1.08
CHRNA4-203ENST00000467563 RNF26Q9BY78 433 aaPredicted RBP21.81■■□□□ 1.08
CHRNA4-203ENST00000467563 STX8Q9UNK0 236 aa21.81■■□□□ 1.08
CHRNA4-203ENST00000467563 TPRNQ4KMQ1 711 aa21.8■■□□□ 1.08
CHRNA4-203ENST00000467563 WASF1Q92558 559 aa21.8■■□□□ 1.08
CHRNA4-203ENST00000467563 SPATA32Q96LK8 384 aa21.8■■□□□ 1.08
CHRNA4-203ENST00000467563 TMEM47Q9BQJ4 181 aa21.8■■□□□ 1.08
CHRNA4-203ENST00000467563 TMEM63CQ9P1W3 806 aa21.8■■□□□ 1.08
CHRNA4-203ENST00000467563 ELP1O95163 1332 aa21.8■■□□□ 1.08
CHRNA4-203ENST00000467563 HLA-DOAP06340 250 aa21.79■■□□□ 1.08
CHRNA4-203ENST00000467563 SLURP2P0DP57 97 aa21.79■■□□□ 1.08
CHRNA4-203ENST00000467563 CXCL9Q07325 125 aa21.79■■□□□ 1.08
CHRNA4-203ENST00000467563 SH3BP5LQ7L8J4 393 aa21.79■■□□□ 1.08
CHRNA4-203ENST00000467563 NLGN2Q8NFZ4 835 aa21.79■■□□□ 1.08
CHRNA4-203ENST00000467563 FTOQ9C0B1 505 aaKnown RBP eCLIP21.79■■□□□ 1.08
CHRNA4-203ENST00000467563 DDTLA6NHG4 134 aaPredicted RBP21.79■■□□□ 1.08
CHRNA4-203ENST00000467563 NPM3O75607 178 aaKnown RBP21.79■■□□□ 1.08
CHRNA4-203ENST00000467563 SHMT1P34896 483 aa21.79■■□□□ 1.08
CHRNA4-203ENST00000467563 SRBD1Q8N5C6 995 aaKnown RBP21.79■■□□□ 1.08
CHRNA4-203ENST00000467563 CEP95Q96GE4 821 aa21.79■■□□□ 1.08
CHRNA4-203ENST00000467563 SWAP70Q9UH65 585 aa21.79■■□□□ 1.08
CHRNA4-203ENST00000467563 AKR1B1P15121 316 aa21.78■■□□□ 1.08
CHRNA4-203ENST00000467563 USP28Q96RU2 1077 aa21.78■■□□□ 1.08
CHRNA4-203ENST00000467563 EHD4Q9H223 541 aa21.78■■□□□ 1.08
CHRNA4-203ENST00000467563 CFAP45Q9UL16 551 aa21.78■■□□□ 1.08
CHRNA4-203ENST00000467563 PLIN4Q96Q06 1357 aa21.78■■□□□ 1.08
CHRNA4-203ENST00000467563 MYH15Q9Y2K3 1946 aa21.78■■□□□ 1.08
CHRNA4-203ENST00000467563 SPDYE2BA6NHP3 402 aa21.78■■□□□ 1.08
CHRNA4-203ENST00000467563 SPDYE6P0CI01 402 aa21.78■■□□□ 1.08
CHRNA4-203ENST00000467563 NOVP48745 357 aa21.78■■□□□ 1.08
CHRNA4-203ENST00000467563 TRIM29Q14134 588 aa21.78■■□□□ 1.08
CHRNA4-203ENST00000467563 PKN1Q16512 942 aa21.78■■□□□ 1.08
CHRNA4-203ENST00000467563 DHX36Q9H2U1 1008 aaKnown RBP21.78■■□□□ 1.08
CHRNA4-203ENST00000467563 DNAJC18Q9H819 358 aa21.78■■□□□ 1.08
CHRNA4-203ENST00000467563 CNTNAP5Q8WYK1 1306 aa21.77■■□□□ 1.08
CHRNA4-203ENST00000467563 hCG_1642624A0A1W2PR95 340 aa21.77■■□□□ 1.08
CHRNA4-203ENST00000467563 PRPF3O43395 683 aaKnown RBP21.77■■□□□ 1.08
CHRNA4-203ENST00000467563 CEBPZQ03701 1054 aaKnown RBP21.77■■□□□ 1.08
CHRNA4-203ENST00000467563 BRAPQ7Z569 592 aa21.77■■□□□ 1.08
CHRNA4-203ENST00000467563 MAP3K14Q99558 947 aa21.77■■□□□ 1.08
CHRNA4-203ENST00000467563 V9GY48 417 aaPredicted RBP21.77■■□□□ 1.08
CHRNA4-203ENST00000467563 ZSCAN23Q3MJ62 389 aa21.76■■□□□ 1.07
CHRNA4-203ENST00000467563 OGFOD1Q8N543 542 aa21.76■■□□□ 1.07
CHRNA4-203ENST00000467563 AGBL3Q8NEM8 1001 aa21.76■■□□□ 1.07
CHRNA4-203ENST00000467563 JDP2Q8WYK2 163 aa21.76■■□□□ 1.07
CHRNA4-203ENST00000467563 ZNF396Q96N95 335 aaPredicted RBP21.76■■□□□ 1.07
CHRNA4-203ENST00000467563 HDAC9Q9UKV0 1011 aa21.76■■□□□ 1.07
CHRNA4-203ENST00000467563 SIPA1L1O43166 1804 aa21.76■■□□□ 1.07
CHRNA4-203ENST00000467563 UTRNP46939 3433 aa21.76■■□□□ 1.07
CHRNA4-203ENST00000467563 KIF5BP33176 963 aa21.76■■□□□ 1.07
CHRNA4-203ENST00000467563 AKAP17AQ02040 695 aaKnown RBP21.76■■□□□ 1.07
CHRNA4-203ENST00000467563 GRM4Q14833 912 aa21.76■■□□□ 1.07
CHRNA4-203ENST00000467563 ATL3Q6DD88 541 aa21.76■■□□□ 1.07
CHRNA4-203ENST00000467563 STAG2Q8N3U4 1231 aa21.76■■□□□ 1.07
CHRNA4-203ENST00000467563 SHISA4Q96DD7 197 aa21.76■■□□□ 1.07
CHRNA4-203ENST00000467563 KCNJ14Q9UNX9 436 aa21.76■■□□□ 1.07
CHRNA4-203ENST00000467563 IGKV6D-41A0A0C4DH26 115 aa21.75■■□□□ 1.07
CHRNA4-203ENST00000467563 MYSM1Q5VVJ2 828 aa21.75■■□□□ 1.07
CHRNA4-203ENST00000467563 ZSCAN29Q8IWY8 852 aaPredicted RBP21.75■■□□□ 1.07
CHRNA4-203ENST00000467563 PI4KBQ9UBF8 816 aa21.75■■□□□ 1.07
CHRNA4-203ENST00000467563 MAD2L2Q9UI95 211 aa21.75■■□□□ 1.07
CHRNA4-203ENST00000467563 FAM196BA6NMK8 535 aa21.75■■□□□ 1.07
CHRNA4-203ENST00000467563 MMP1P03956 469 aa21.75■■□□□ 1.07
CHRNA4-203ENST00000467563 U2AF2P26368 475 aaKnown RBP eCLIP21.75■■□□□ 1.07
CHRNA4-203ENST00000467563 DLGAP5Q15398 846 aa21.75■■□□□ 1.07
CHRNA4-203ENST00000467563 CIAPIN1Q6FI81 312 aa21.75■■□□□ 1.07
CHRNA4-203ENST00000467563 MTMR4Q9NYA4 1195 aa21.75■■□□□ 1.07
CHRNA4-203ENST00000467563 RCOR1Q9UKL0 485 aa21.75■■□□□ 1.07
CHRNA4-203ENST00000467563 MTMR7Q9Y216 660 aa21.75■■□□□ 1.07
CHRNA4-203ENST00000467563 ENTPD3O75355 529 aa21.74■■□□□ 1.07
CHRNA4-203ENST00000467563 TOP1P11387 765 aaKnown RBP21.74■■□□□ 1.07
CHRNA4-203ENST00000467563 RASSF7Q02833 373 aa21.74■■□□□ 1.07
CHRNA4-203ENST00000467563 RASGRP2Q7LDG7 609 aa21.74■■□□□ 1.07
CHRNA4-203ENST00000467563 PGBD1Q96JS3 809 aa21.74■■□□□ 1.07
CHRNA4-203ENST00000467563 LTBP3Q9NS15 1303 aa21.74■■□□□ 1.07
CHRNA4-203ENST00000467563 CLRN2A0PK11 232 aa21.73■■□□□ 1.07
CHRNA4-203ENST00000467563 PRELPP51888 382 aa21.73■■□□□ 1.07
CHRNA4-203ENST00000467563 CLEC10AQ8IUN9 316 aa21.73■■□□□ 1.07
CHRNA4-203ENST00000467563 ATRNL1Q5VV63 1379 aa21.73■■□□□ 1.07
CHRNA4-203ENST00000467563 MYH6P13533 1939 aa21.73■■□□□ 1.07
CHRNA4-203ENST00000467563 MYH8P13535 1937 aa21.73■■□□□ 1.07
CHRNA4-203ENST00000467563 FSD2A1L4K1 749 aa21.73■■□□□ 1.07
CHRNA4-203ENST00000467563 GAS2L3Q86XJ1 694 aa21.73■■□□□ 1.07
CHRNA4-203ENST00000467563 SLC35G1Q2M3R5 365 aa21.72■■□□□ 1.07
CHRNA4-203ENST00000467563 RTEL1Q9NZ71 1219 aa21.72■■□□□ 1.07
CHRNA4-203ENST00000467563 VPS54Q9P1Q0 977 aa21.72■■□□□ 1.07
CHRNA4-203ENST00000467563 ZNF70Q9UC06 446 aaPredicted RBP21.72■■□□□ 1.07
CHRNA4-203ENST00000467563 BAZ2BQ9UIF8 2168 aaKnown RBP21.72■■□□□ 1.07
CHRNA4-203ENST00000467563 PALM3A6NDB9 673 aaPredicted RBP21.71■■□□□ 1.07
CHRNA4-203ENST00000467563 BTBD18B2RXH4 712 aa21.71■■□□□ 1.07
CHRNA4-203ENST00000467563 ZNF445P59923 1031 aa21.71■■□□□ 1.07
CHRNA4-203ENST00000467563 GNL2Q13823 731 aaKnown RBP21.71■■□□□ 1.07
CHRNA4-203ENST00000467563 DIS3L2Q8IYB7 885 aaKnown RBP21.71■■□□□ 1.07
CHRNA4-203ENST00000467563 CLIC4Q9Y696 253 aa21.71■■□□□ 1.07
CHRNA4-203ENST00000467563 SHTN1A0MZ66 631 aa21.71■■□□□ 1.07
CHRNA4-203ENST00000467563 TCP10L2B9ZVM9 353 aa21.71■■□□□ 1.07
CHRNA4-203ENST00000467563 VEGFAP15692 232 aaPredicted RBP21.71■■□□□ 1.07
CHRNA4-203ENST00000467563 EIF6P56537 245 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms