RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 CYP2D7A0A087X1C5 515 aa17.87■□□□□ 0.45
ATPAF2-204ENST00000467560 A0A1W2PRG0 241 aa17.87■□□□□ 0.45
ATPAF2-204ENST00000467560 H0YGN5 161 aa17.87■□□□□ 0.45
ATPAF2-204ENST00000467560 CNMDO75829 334 aa17.87■□□□□ 0.45
ATPAF2-204ENST00000467560 SGPL1O95470 568 aa17.87■□□□□ 0.45
ATPAF2-204ENST00000467560 SEPT2Q15019 361 aa17.87■□□□□ 0.45
ATPAF2-204ENST00000467560 GPRC5AQ8NFJ5 357 aa17.87■□□□□ 0.45
ATPAF2-204ENST00000467560 DYNLL2Q96FJ2 89 aa17.87■□□□□ 0.45
ATPAF2-204ENST00000467560 DEFB118Q96PH6 123 aa17.87■□□□□ 0.45
ATPAF2-204ENST00000467560 PAK6Q9NQU5 681 aaPredicted RBP17.87■□□□□ 0.45
ATPAF2-204ENST00000467560 TSHZ3Q63HK5 1081 aa17.86■□□□□ 0.45
ATPAF2-204ENST00000467560 NKX2-3Q8TAU0 364 aa17.86■□□□□ 0.45
ATPAF2-204ENST00000467560 FEZ1Q99689 392 aa17.86■□□□□ 0.45
ATPAF2-204ENST00000467560 PAGR1Q9BTK6 254 aa17.86■□□□□ 0.45
ATPAF2-204ENST00000467560 KIAA1683Q9H0B3 1180 aa17.86■□□□□ 0.45
ATPAF2-204ENST00000467560 TRIOBPQ9H2D6 2365 aa17.86■□□□□ 0.45
ATPAF2-204ENST00000467560 VCAM1P19320 739 aa17.85■□□□□ 0.45
ATPAF2-204ENST00000467560 CYP2B6P20813 491 aa17.85■□□□□ 0.45
ATPAF2-204ENST00000467560 ERVK-9P63128 1117 aa17.85■□□□□ 0.45
ATPAF2-204ENST00000467560 ERVK-24P63145 666 aa17.85■□□□□ 0.45
ATPAF2-204ENST00000467560 HABP4Q5JVS0 413 aaKnown RBP17.85■□□□□ 0.45
ATPAF2-204ENST00000467560 KIAA1755Q5JYT7 1200 aa17.85■□□□□ 0.45
ATPAF2-204ENST00000467560 CATSPERGQ6ZRH7 1159 aa17.85■□□□□ 0.45
ATPAF2-204ENST00000467560 CLEC10AQ8IUN9 316 aa17.85■□□□□ 0.45
ATPAF2-204ENST00000467560 TRIB2Q92519 343 aa17.85■□□□□ 0.45
ATPAF2-204ENST00000467560 PUS7LQ9H0K6 701 aaKnown RBP17.85■□□□□ 0.45
ATPAF2-204ENST00000467560 DCTPP1Q9H773 170 aa17.85■□□□□ 0.45
ATPAF2-204ENST00000467560 USP17L15C9J2P7 530 aa17.84■□□□□ 0.45
ATPAF2-204ENST00000467560 USP17L13C9JLJ4 530 aa17.84■□□□□ 0.45
ATPAF2-204ENST00000467560 USP17L11C9JVI0 530 aa17.84■□□□□ 0.45
ATPAF2-204ENST00000467560 USP17L18D6R9N7 530 aa17.84■□□□□ 0.45
ATPAF2-204ENST00000467560 USP17L22D6RA61 530 aa17.84■□□□□ 0.45
ATPAF2-204ENST00000467560 USP17L17D6RBQ6 530 aa17.84■□□□□ 0.45
ATPAF2-204ENST00000467560 USP17L19D6RCP7 530 aa17.84■□□□□ 0.45
ATPAF2-204ENST00000467560 USP17L20D6RJB6 530 aa17.84■□□□□ 0.45
ATPAF2-204ENST00000467560 USP17L24Q0WX57 530 aa17.84■□□□□ 0.45
ATPAF2-204ENST00000467560 SIAH1Q8IUQ4 282 aa17.84■□□□□ 0.45
ATPAF2-204ENST00000467560 USP6NLQ92738 828 aa17.84■□□□□ 0.45
ATPAF2-204ENST00000467560 CABP5Q9NP86 173 aa17.84■□□□□ 0.45
ATPAF2-204ENST00000467560 PCDHB15Q9Y5E8 787 aa17.84■□□□□ 0.45
ATPAF2-204ENST00000467560 MPHOSPH10O00566 681 aaKnown RBP17.83■□□□□ 0.44
ATPAF2-204ENST00000467560 FARP2O94887 1054 aaPredicted RBP17.83■□□□□ 0.44
ATPAF2-204ENST00000467560 HMGCRP04035 888 aa17.83■□□□□ 0.44
ATPAF2-204ENST00000467560 AKR1B1P15121 316 aa17.83■□□□□ 0.44
ATPAF2-204ENST00000467560 UBE3CQ15386 1083 aa17.83■□□□□ 0.44
ATPAF2-204ENST00000467560 CRISPLD2Q9H0B8 497 aa17.83■□□□□ 0.44
ATPAF2-204ENST00000467560 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.83■□□□□ 0.44
ATPAF2-204ENST00000467560 BTBD7Q9P203 1132 aa17.83■□□□□ 0.44
ATPAF2-204ENST00000467560 COLQQ9Y215 455 aaPredicted RBP17.83■□□□□ 0.44
ATPAF2-204ENST00000467560 SZT2Q5T011 3432 aa17.82■□□□□ 0.44
ATPAF2-204ENST00000467560 TFRCP02786 760 aaKnown RBP17.82■□□□□ 0.44
ATPAF2-204ENST00000467560 USP14P54578 494 aa17.82■□□□□ 0.44
ATPAF2-204ENST00000467560 CCL14Q16627 93 aa17.82■□□□□ 0.44
ATPAF2-204ENST00000467560 MORN1Q5T089 497 aa17.82■□□□□ 0.44
ATPAF2-204ENST00000467560 GPR142Q7Z601 462 aa17.82■□□□□ 0.44
ATPAF2-204ENST00000467560 DIS3LQ8TF46 1054 aaKnown RBP17.82■□□□□ 0.44
ATPAF2-204ENST00000467560 DPF3Q92784 378 aa17.82■□□□□ 0.44
ATPAF2-204ENST00000467560 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.82■□□□□ 0.44
ATPAF2-204ENST00000467560 RPAP3Q9H6T3 665 aaPredicted RBP17.82■□□□□ 0.44
ATPAF2-204ENST00000467560 ATP8A2Q9NTI2 1148 aa17.82■□□□□ 0.44
ATPAF2-204ENST00000467560 ECHDC1Q9NTX5 307 aa17.82■□□□□ 0.44
ATPAF2-204ENST00000467560 SPDYE16A6NNV3 312 aaPredicted RBP17.81■□□□□ 0.44
ATPAF2-204ENST00000467560 USP17L12C9JPN9 530 aa17.81■□□□□ 0.44
ATPAF2-204ENST00000467560 USP17L21D6R901 530 aa17.81■□□□□ 0.44
ATPAF2-204ENST00000467560 MAPK4P31152 587 aa17.81■□□□□ 0.44
ATPAF2-204ENST00000467560 C12orf60Q5U649 245 aa17.81■□□□□ 0.44
ATPAF2-204ENST00000467560 GCC1Q96CN9 775 aa17.81■□□□□ 0.44
ATPAF2-204ENST00000467560 SLC4A4Q9Y6R1 1079 aa17.81■□□□□ 0.44
ATPAF2-204ENST00000467560 BAZ2AQ9UIF9 1905 aaKnown RBP17.8■□□□□ 0.44
ATPAF2-204ENST00000467560 CDK8P49336 464 aa17.8■□□□□ 0.44
ATPAF2-204ENST00000467560 MNX1P50219 401 aaPredicted RBP17.8■□□□□ 0.44
ATPAF2-204ENST00000467560 MAP3K21Q5TCX8 1036 aa17.8■□□□□ 0.44
ATPAF2-204ENST00000467560 CTR9Q6PD62 1173 aa17.8■□□□□ 0.44
ATPAF2-204ENST00000467560 PLEKHH3Q7Z736 793 aa17.8■□□□□ 0.44
ATPAF2-204ENST00000467560 OTUD7AQ8TE49 926 aaPredicted RBP17.8■□□□□ 0.44
ATPAF2-204ENST00000467560 NUDT12Q9BQG2 462 aa17.8■□□□□ 0.44
ATPAF2-204ENST00000467560 RABGAP1Q9Y3P9 1069 aa17.8■□□□□ 0.44
ATPAF2-204ENST00000467560 RPTORQ8N122 1335 aa17.79■□□□□ 0.44
ATPAF2-204ENST00000467560 XRCC5P13010 732 aaKnown RBP17.79■□□□□ 0.44
ATPAF2-204ENST00000467560 PRKAR2AP13861 404 aaKnown RBP17.79■□□□□ 0.44
ATPAF2-204ENST00000467560 LBX2Q6XYB7 198 aa17.79■□□□□ 0.44
ATPAF2-204ENST00000467560 TMEM179Q6ZVK1 233 aa17.79■□□□□ 0.44
ATPAF2-204ENST00000467560 GTF3C2Q8WUA4 911 aaPredicted RBP17.79■□□□□ 0.44
ATPAF2-204ENST00000467560 SOCS4Q8WXH5 440 aa17.79■□□□□ 0.44
ATPAF2-204ENST00000467560 OSBP2Q969R2 916 aa17.79■□□□□ 0.44
ATPAF2-204ENST00000467560 PAWRQ96IZ0 340 aaKnown RBP17.79■□□□□ 0.44
ATPAF2-204ENST00000467560 STRBPQ96SI9 672 aaKnown RBP17.79■□□□□ 0.44
ATPAF2-204ENST00000467560 SWAP70Q9UH65 585 aa17.79■□□□□ 0.44
ATPAF2-204ENST00000467560 CACNB2Q08289 660 aaPredicted RBP17.78■□□□□ 0.44
ATPAF2-204ENST00000467560 C16orf86Q6ZW13 317 aa17.78■□□□□ 0.44
ATPAF2-204ENST00000467560 HMX1Q9NP08 348 aaPredicted RBP17.78■□□□□ 0.44
ATPAF2-204ENST00000467560 FLRT1Q9NZU1 646 aa17.78■□□□□ 0.44
ATPAF2-204ENST00000467560 MYH7P12883 1935 aa17.77■□□□□ 0.44
ATPAF2-204ENST00000467560 CHRDL2Q6WN34 429 aa17.77■□□□□ 0.44
ATPAF2-204ENST00000467560 SPICE1Q8N0Z3 855 aa17.77■□□□□ 0.44
ATPAF2-204ENST00000467560 KBTBD3Q8NAB2 608 aa17.77■□□□□ 0.44
ATPAF2-204ENST00000467560 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.77■□□□□ 0.44
ATPAF2-204ENST00000467560 RLFQ13129 1914 aa17.76■□□□□ 0.43
ATPAF2-204ENST00000467560 GSG1L2A8MUP6 293 aa17.76■□□□□ 0.43
ATPAF2-204ENST00000467560 ZKSCAN1P17029 563 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms