RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 ELNP15502 786 aa16.93■□□□□ 0.3
CCHCR1-211ENST00000467553 MX1P20591 662 aa16.93■□□□□ 0.3
CCHCR1-211ENST00000467553 HERVK_113P62684 666 aa16.93■□□□□ 0.3
CCHCR1-211ENST00000467553 LCORLQ8N3X6 602 aa16.93■□□□□ 0.3
CCHCR1-211ENST00000467553 ANKLE1Q8NAG6 615 aa16.93■□□□□ 0.3
CCHCR1-211ENST00000467553 SOCS4Q8WXH5 440 aa16.93■□□□□ 0.3
CCHCR1-211ENST00000467553 CRISPLD2Q9H0B8 497 aa16.93■□□□□ 0.3
CCHCR1-211ENST00000467553 MYH7P12883 1935 aa16.92■□□□□ 0.3
CCHCR1-211ENST00000467553 H0YGN5 161 aa16.92■□□□□ 0.3
CCHCR1-211ENST00000467553 GLRX3O76003 335 aaKnown RBP16.92■□□□□ 0.3
CCHCR1-211ENST00000467553 XRCC5P13010 732 aaKnown RBP16.92■□□□□ 0.3
CCHCR1-211ENST00000467553 MAPK4P31152 587 aa16.92■□□□□ 0.3
CCHCR1-211ENST00000467553 UBE3CQ15386 1083 aa16.92■□□□□ 0.3
CCHCR1-211ENST00000467553 KBTBD3Q8NAB2 608 aa16.92■□□□□ 0.3
CCHCR1-211ENST00000467553 C12orf42Q96LP6 360 aa16.92■□□□□ 0.3
CCHCR1-211ENST00000467553 P2RX7Q99572 595 aaKnown RBP16.92■□□□□ 0.3
CCHCR1-211ENST00000467553 LNPKQ9C0E8 428 aa16.92■□□□□ 0.3
CCHCR1-211ENST00000467553 CABP5Q9NP86 173 aa16.92■□□□□ 0.3
CCHCR1-211ENST00000467553 RPTORQ8N122 1335 aa16.92■□□□□ 0.3
CCHCR1-211ENST00000467553 MBD4O95243 580 aa16.91■□□□□ 0.3
CCHCR1-211ENST00000467553 GDF11O95390 407 aa16.91■□□□□ 0.3
CCHCR1-211ENST00000467553 POLR3DP05423 398 aaPredicted RBP16.91■□□□□ 0.3
CCHCR1-211ENST00000467553 CERKLQ49MI3 558 aaPredicted RBP16.91■□□□□ 0.3
CCHCR1-211ENST00000467553 SMC5Q8IY18 1101 aa16.91■□□□□ 0.3
CCHCR1-211ENST00000467553 PI4K2BQ8TCG2 481 aa16.91■□□□□ 0.3
CCHCR1-211ENST00000467553 SDR42E1Q8WUS8 393 aa16.91■□□□□ 0.3
CCHCR1-211ENST00000467553 DEFB118Q96PH6 123 aa16.91■□□□□ 0.3
CCHCR1-211ENST00000467553 NUDT12Q9BQG2 462 aa16.91■□□□□ 0.3
CCHCR1-211ENST00000467553 HMX1Q9NP08 348 aaPredicted RBP16.91■□□□□ 0.3
CCHCR1-211ENST00000467553 COLQQ9Y215 455 aaPredicted RBP16.91■□□□□ 0.3
CCHCR1-211ENST00000467553 USP17L15C9J2P7 530 aa16.9■□□□□ 0.3
CCHCR1-211ENST00000467553 USP17L13C9JLJ4 530 aa16.9■□□□□ 0.3
CCHCR1-211ENST00000467553 USP17L11C9JVI0 530 aa16.9■□□□□ 0.3
CCHCR1-211ENST00000467553 USP17L18D6R9N7 530 aa16.9■□□□□ 0.3
CCHCR1-211ENST00000467553 USP17L22D6RA61 530 aa16.9■□□□□ 0.3
CCHCR1-211ENST00000467553 USP17L17D6RBQ6 530 aa16.9■□□□□ 0.3
CCHCR1-211ENST00000467553 USP17L19D6RCP7 530 aa16.9■□□□□ 0.3
CCHCR1-211ENST00000467553 USP17L20D6RJB6 530 aa16.9■□□□□ 0.3
CCHCR1-211ENST00000467553 PRKAB2O43741 272 aa16.9■□□□□ 0.3
CCHCR1-211ENST00000467553 GH2P01242 217 aa16.9■□□□□ 0.3
CCHCR1-211ENST00000467553 JAG1P78504 1218 aa16.9■□□□□ 0.3
CCHCR1-211ENST00000467553 USP17L24Q0WX57 530 aa16.9■□□□□ 0.3
CCHCR1-211ENST00000467553 KIAA1683Q9H0B3 1180 aa16.9■□□□□ 0.3
CCHCR1-211ENST00000467553 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.9■□□□□ 0.3
CCHCR1-211ENST00000467553 PUS7LQ9H0K6 701 aaKnown RBP16.9■□□□□ 0.3
CCHCR1-211ENST00000467553 EMILIN3Q9NT22 766 aa16.9■□□□□ 0.3
CCHCR1-211ENST00000467553 MCM9Q9NXL9 1143 aa16.9■□□□□ 0.3
CCHCR1-211ENST00000467553 RNF113AO15541 343 aaKnown RBP16.89■□□□□ 0.29
CCHCR1-211ENST00000467553 PLCD1P51178 756 aa16.89■□□□□ 0.29
CCHCR1-211ENST00000467553 PDE1AP54750 535 aa16.89■□□□□ 0.29
CCHCR1-211ENST00000467553 ERVK-9P63128 1117 aa16.89■□□□□ 0.29
CCHCR1-211ENST00000467553 ERVK-24P63145 666 aa16.89■□□□□ 0.29
CCHCR1-211ENST00000467553 CCNA1P78396 465 aa16.89■□□□□ 0.29
CCHCR1-211ENST00000467553 ABCB5Q2M3G0 1257 aa16.89■□□□□ 0.29
CCHCR1-211ENST00000467553 NECAB2Q7Z6G3 386 aa16.89■□□□□ 0.29
CCHCR1-211ENST00000467553 CCAR1Q8IX12 1150 aaKnown RBP16.89■□□□□ 0.29
CCHCR1-211ENST00000467553 RBPJLQ9UBG7 517 aa16.89■□□□□ 0.29
CCHCR1-211ENST00000467553 RABGAP1Q9Y3P9 1069 aa16.89■□□□□ 0.29
CCHCR1-211ENST00000467553 FXR1P51114 621 aaKnown RBP eCLIP16.88■□□□□ 0.29
CCHCR1-211ENST00000467553 LRRFIP1Q32MZ4 808 aaKnown RBP16.88■□□□□ 0.29
CCHCR1-211ENST00000467553 LBX2Q6XYB7 198 aa16.88■□□□□ 0.29
CCHCR1-211ENST00000467553 CHD1LQ86WJ1 897 aa16.88■□□□□ 0.29
CCHCR1-211ENST00000467553 FEZ1Q99689 392 aa16.88■□□□□ 0.29
CCHCR1-211ENST00000467553 FSD1Q9BTV5 496 aa16.88■□□□□ 0.29
CCHCR1-211ENST00000467553 DCP1AQ9NPI6 582 aaPredicted RBP16.88■□□□□ 0.29
CCHCR1-211ENST00000467553 STAP2Q9UGK3 403 aa16.88■□□□□ 0.29
CCHCR1-211ENST00000467553 SLC4A4Q9Y6R1 1079 aa16.88■□□□□ 0.29
CCHCR1-211ENST00000467553 PLXNB2O15031 1838 aa16.88■□□□□ 0.29
CCHCR1-211ENST00000467553 SALL3Q9BXA9 1300 aa16.88■□□□□ 0.29
CCHCR1-211ENST00000467553 ZFYP08048 801 aaPredicted RBP16.87■□□□□ 0.29
CCHCR1-211ENST00000467553 RGS2P41220 211 aa16.87■□□□□ 0.29
CCHCR1-211ENST00000467553 NUCB1Q02818 461 aa16.87■□□□□ 0.29
CCHCR1-211ENST00000467553 GABPAQ06546 454 aa16.87■□□□□ 0.29
CCHCR1-211ENST00000467553 RAB3GAP1Q15042 981 aa16.87■□□□□ 0.29
CCHCR1-211ENST00000467553 OSBP2Q969R2 916 aa16.87■□□□□ 0.29
CCHCR1-211ENST00000467553 ATP8A2Q9NTI2 1148 aa16.87■□□□□ 0.29
CCHCR1-211ENST00000467553 SWAP70Q9UH65 585 aa16.87■□□□□ 0.29
CCHCR1-211ENST00000467553 A0A1W2PPC1 479 aa16.86■□□□□ 0.29
CCHCR1-211ENST00000467553 EVI5O60447 810 aa16.86■□□□□ 0.29
CCHCR1-211ENST00000467553 SHMT1P34896 483 aa16.86■□□□□ 0.29
CCHCR1-211ENST00000467553 MAP3K21Q5TCX8 1036 aa16.86■□□□□ 0.29
CCHCR1-211ENST00000467553 CATSPERGQ6ZRH7 1159 aa16.86■□□□□ 0.29
CCHCR1-211ENST00000467553 PLEKHH3Q7Z736 793 aa16.86■□□□□ 0.29
CCHCR1-211ENST00000467553 APPBP2Q92624 585 aa16.86■□□□□ 0.29
CCHCR1-211ENST00000467553 USP6NLQ92738 828 aa16.86■□□□□ 0.29
CCHCR1-211ENST00000467553 DDRGK1Q96HY6 314 aa16.86■□□□□ 0.29
CCHCR1-211ENST00000467553 TXNRD2Q9NNW7 524 aa16.86■□□□□ 0.29
CCHCR1-211ENST00000467553 DDX60LQ5H9U9 1706 aaKnown RBP16.86■□□□□ 0.29
CCHCR1-211ENST00000467553 NAV1Q8NEY1 1877 aa16.86■□□□□ 0.29
CCHCR1-211ENST00000467553 CYP2D6P10635 497 aa16.85■□□□□ 0.29
CCHCR1-211ENST00000467553 CYP2B6P20813 491 aa16.85■□□□□ 0.29
CCHCR1-211ENST00000467553 EVX2Q03828 476 aa16.85■□□□□ 0.29
CCHCR1-211ENST00000467553 SHROOM1Q2M3G4 852 aaPredicted RBP16.85■□□□□ 0.29
CCHCR1-211ENST00000467553 Q3C1V9 767 aa16.85■□□□□ 0.29
CCHCR1-211ENST00000467553 MORN1Q5T089 497 aa16.85■□□□□ 0.29
CCHCR1-211ENST00000467553 CHRDL2Q6WN34 429 aa16.85■□□□□ 0.29
CCHCR1-211ENST00000467553 GPR142Q7Z601 462 aa16.85■□□□□ 0.29
CCHCR1-211ENST00000467553 TRIB2Q92519 343 aa16.85■□□□□ 0.29
CCHCR1-211ENST00000467553 STRBPQ96SI9 672 aaKnown RBP16.85■□□□□ 0.29
CCHCR1-211ENST00000467553 CWC22Q9HCG8 908 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms