RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 TOX2Q96NM4 488 aa7.39□□□□□ -1.23
SMC4-207ENST00000467263 AK5Q9Y6K8 562 aa7.39□□□□□ -1.23
SMC4-207ENST00000467263 TRHRP34981 398 aaPredicted RBP7.38□□□□□ -1.23
SMC4-207ENST00000467263 DAB2P98082 770 aa7.38□□□□□ -1.23
SMC4-207ENST00000467263 ADAMTS10Q9H324 1103 aa7.38□□□□□ -1.23
SMC4-207ENST00000467263 ZSCAN22P10073 491 aaPredicted RBP7.37□□□□□ -1.23
SMC4-207ENST00000467263 HK2P52789 917 aa7.37□□□□□ -1.23
SMC4-207ENST00000467263 CCDC85BQ15834 202 aaPredicted RBP7.37□□□□□ -1.23
SMC4-207ENST00000467263 KRTAP19-4Q3LI73 84 aa7.37□□□□□ -1.23
SMC4-207ENST00000467263 ANKLE2Q86XL3 938 aa7.37□□□□□ -1.23
SMC4-207ENST00000467263 FBXO15Q8NCQ5 510 aaPredicted RBP7.37□□□□□ -1.23
SMC4-207ENST00000467263 DNAJB8Q8NHS0 232 aa7.37□□□□□ -1.23
SMC4-207ENST00000467263 PPP1R16BQ96T49 567 aa7.37□□□□□ -1.23
SMC4-207ENST00000467263 DUSP15Q9H1R2 295 aaPredicted RBP7.37□□□□□ -1.23
SMC4-207ENST00000467263 NPIPB6E9PJ23 425 aa7.36□□□□□ -1.23
SMC4-207ENST00000467263 MRPL41Q8IXM3 137 aaKnown RBP7.36□□□□□ -1.23
SMC4-207ENST00000467263 ABHD4Q8TB40 342 aa7.36□□□□□ -1.23
SMC4-207ENST00000467263 SP110Q9HB58 689 aa7.36□□□□□ -1.23
SMC4-207ENST00000467263 PGRP06401 933 aa7.35□□□□□ -1.23
SMC4-207ENST00000467263 TFE3P19532 575 aaPredicted RBP7.35□□□□□ -1.23
SMC4-207ENST00000467263 MEI1Q5TIA1 1274 aa7.35□□□□□ -1.23
SMC4-207ENST00000467263 AGMOQ6ZNB7 445 aa7.35□□□□□ -1.23
SMC4-207ENST00000467263 TMC4Q7Z404 712 aa7.35□□□□□ -1.23
SMC4-207ENST00000467263 ACSF2Q96CM8 615 aaPredicted RBP7.35□□□□□ -1.23
SMC4-207ENST00000467263 TMEM87BQ96K49 555 aa7.35□□□□□ -1.23
SMC4-207ENST00000467263 KRTAP4-11Q9BYQ6 195 aa7.35□□□□□ -1.23
SMC4-207ENST00000467263 MRS2Q9HD23 443 aa7.35□□□□□ -1.23
SMC4-207ENST00000467263 CORINQ9Y5Q5 1042 aa7.35□□□□□ -1.23
SMC4-207ENST00000467263 SORBS3O60504 671 aa7.34□□□□□ -1.23
SMC4-207ENST00000467263 KIR3DL1P43629 444 aa7.34□□□□□ -1.23
SMC4-207ENST00000467263 LIG3P49916 1009 aa7.34□□□□□ -1.23
SMC4-207ENST00000467263 RPS26P62854 115 aaKnown RBP7.34□□□□□ -1.23
SMC4-207ENST00000467263 GAB4Q2WGN9 574 aa7.34□□□□□ -1.23
SMC4-207ENST00000467263 CREG2Q8IUH2 290 aa7.34□□□□□ -1.23
SMC4-207ENST00000467263 PPP1R13LQ8WUF5 828 aa7.34□□□□□ -1.23
SMC4-207ENST00000467263 CD320Q9NPF0 282 aa7.34□□□□□ -1.23
SMC4-207ENST00000467263 DCP1AQ9NPI6 582 aaPredicted RBP7.34□□□□□ -1.23
SMC4-207ENST00000467263 TMEM59LQ9UK28 342 aa7.34□□□□□ -1.23
SMC4-207ENST00000467263 TLR6Q9Y2C9 796 aa7.34□□□□□ -1.23
SMC4-207ENST00000467263 UPK3BL1B0FP48 263 aa7.33□□□□□ -1.24
SMC4-207ENST00000467263 UPK3BL2E5RIL1 263 aa7.33□□□□□ -1.24
SMC4-207ENST00000467263 ETV2O00321 342 aaPredicted RBP7.33□□□□□ -1.24
SMC4-207ENST00000467263 NFIBO00712 420 aa7.33□□□□□ -1.24
SMC4-207ENST00000467263 CTSHP09668 335 aa7.33□□□□□ -1.24
SMC4-207ENST00000467263 TIGD5Q53EQ6 642 aa7.33□□□□□ -1.24
SMC4-207ENST00000467263 ZNF326Q5BKZ1 582 aaKnown RBP7.33□□□□□ -1.24
SMC4-207ENST00000467263 ZNF746Q6NUN9 644 aaPredicted RBP7.33□□□□□ -1.24
SMC4-207ENST00000467263 ATG14Q6ZNE5 492 aa7.33□□□□□ -1.24
SMC4-207ENST00000467263 ZSCAN18Q8TBC5 510 aaPredicted RBP7.33□□□□□ -1.24
SMC4-207ENST00000467263 C19orf44Q9H6X5 657 aa7.33□□□□□ -1.24
SMC4-207ENST00000467263 VTI1BQ9UEU0 232 aa7.33□□□□□ -1.24
SMC4-207ENST00000467263 LRRN2O75325 713 aa7.32□□□□□ -1.24
SMC4-207ENST00000467263 HPXP02790 462 aa7.32□□□□□ -1.24
SMC4-207ENST00000467263 TPP2P29144 1249 aaPredicted RBP7.32□□□□□ -1.24
SMC4-207ENST00000467263 MCATQ8IVS2 390 aaKnown RBP7.32□□□□□ -1.24
SMC4-207ENST00000467263 MYLIPQ8WY64 445 aa7.32□□□□□ -1.24
SMC4-207ENST00000467263 JARID2Q92833 1246 aaPredicted RBP7.32□□□□□ -1.24
SMC4-207ENST00000467263 RNF32Q9H0A6 362 aa7.32□□□□□ -1.24
SMC4-207ENST00000467263 EPB41L4BQ9H329 900 aa7.32□□□□□ -1.24
SMC4-207ENST00000467263 F6X3S4 739 aa7.31□□□□□ -1.24
SMC4-207ENST00000467263 ZNF16P17020 682 aaPredicted RBP7.31□□□□□ -1.24
SMC4-207ENST00000467263 CYP7A1P22680 504 aa7.31□□□□□ -1.24
SMC4-207ENST00000467263 SLC6A19Q695T7 634 aa7.31□□□□□ -1.24
SMC4-207ENST00000467263 TMPRSS7Q7RTY8 843 aa7.31□□□□□ -1.24
SMC4-207ENST00000467263 PIWIL2Q8TC59 973 aaKnown RBP7.31□□□□□ -1.24
SMC4-207ENST00000467263 TMEM253P0C7T8 217 aa7.3□□□□□ -1.24
SMC4-207ENST00000467263 SRFP11831 508 aa7.3□□□□□ -1.24
SMC4-207ENST00000467263 RAC2P15153 192 aa7.3□□□□□ -1.24
SMC4-207ENST00000467263 KCNA10Q16322 511 aa7.3□□□□□ -1.24
SMC4-207ENST00000467263 LILRA6Q6PI73 481 aa7.3□□□□□ -1.24
SMC4-207ENST00000467263 SIAH1Q8IUQ4 282 aa7.3□□□□□ -1.24
SMC4-207ENST00000467263 MIR1-1HGQ9H1L0 117 aa7.3□□□□□ -1.24
SMC4-207ENST00000467263 EBF1Q9UH73 591 aa7.3□□□□□ -1.24
SMC4-207ENST00000467263 CEP131Q9UPN4 1083 aa7.3□□□□□ -1.24
SMC4-207ENST00000467263 SMG5Q9UPR3 1016 aaKnown RBP7.3□□□□□ -1.24
SMC4-207ENST00000467263 TACC3Q9Y6A5 838 aa7.3□□□□□ -1.24
SMC4-207ENST00000467263 ZGLP1P0C6A0 271 aa7.29□□□□□ -1.24
SMC4-207ENST00000467263 MED14OSP0DP75 135 aa7.29□□□□□ -1.24
SMC4-207ENST00000467263 LMNB1P20700 586 aa7.29□□□□□ -1.24
SMC4-207ENST00000467263 ETV3P41162 512 aa7.29□□□□□ -1.24
SMC4-207ENST00000467263 TAF1CQ15572 869 aaPredicted RBP7.29□□□□□ -1.24
SMC4-207ENST00000467263 TTLL10Q6ZVT0 673 aa7.29□□□□□ -1.24
SMC4-207ENST00000467263 DTWD2Q8NBA8 298 aa7.29□□□□□ -1.24
SMC4-207ENST00000467263 CCDC120Q96HB5 630 aa7.29□□□□□ -1.24
SMC4-207ENST00000467263 CRELD1Q96HD1 420 aa7.29□□□□□ -1.24
SMC4-207ENST00000467263 COX4I2Q96KJ9 171 aa7.29□□□□□ -1.24
SMC4-207ENST00000467263 RPL6Q02878 288 aaKnown RBP7.28□□□□□ -1.24
SMC4-207ENST00000467263 EGR3Q06889 387 aa7.28□□□□□ -1.24
SMC4-207ENST00000467263 TSNAXIP1Q2TAA8 658 aa7.28□□□□□ -1.24
SMC4-207ENST00000467263 BNC2Q6ZN30 1099 aaPredicted RBP7.28□□□□□ -1.24
SMC4-207ENST00000467263 DUSP13Q9UII6 198 aa7.28□□□□□ -1.24
SMC4-207ENST00000467263 PCDHA11Q9Y5I1 949 aa7.28□□□□□ -1.24
SMC4-207ENST00000467263 GALK1P51570 392 aa7.27□□□□□ -1.25
SMC4-207ENST00000467263 TSPYL5Q86VY4 417 aaPredicted RBP7.27□□□□□ -1.25
SMC4-207ENST00000467263 AMIGO3Q86WK7 504 aa7.27□□□□□ -1.25
SMC4-207ENST00000467263 KCNN1Q92952 543 aa7.27□□□□□ -1.25
SMC4-207ENST00000467263 GPR62Q9BZJ7 368 aa7.27□□□□□ -1.25
SMC4-207ENST00000467263 USP31Q70CQ4 1352 aa7.27□□□□□ -1.25
SMC4-207ENST00000467263 MYOCOSA0A1B0GUC4 107 aa7.26□□□□□ -1.25
SMC4-207ENST00000467263 SHISA3A0PJX4 238 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms