RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 TMEM87BQ96K49 555 aa5.95□□□□□ -1.46
VPS13A-209ENST00000467124 LGR4Q9BXB1 951 aa5.95□□□□□ -1.46
VPS13A-209ENST00000467124 USP21Q9UK80 565 aa5.95□□□□□ -1.46
VPS13A-209ENST00000467124 ENPP3O14638 875 aa5.94□□□□□ -1.46
VPS13A-209ENST00000467124 TNFRSF10CO14798 259 aa5.94□□□□□ -1.46
VPS13A-209ENST00000467124 ALX3O95076 343 aa5.94□□□□□ -1.46
VPS13A-209ENST00000467124 NTF4P34130 210 aa5.94□□□□□ -1.46
VPS13A-209ENST00000467124 TKFCQ3LXA3 575 aa5.94□□□□□ -1.46
VPS13A-209ENST00000467124 SHISA2Q6UWI4 295 aa5.94□□□□□ -1.46
VPS13A-209ENST00000467124 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.94□□□□□ -1.46
VPS13A-209ENST00000467124 FILIP1Q7Z7B0 1213 aa5.94□□□□□ -1.46
VPS13A-209ENST00000467124 TMEM192Q8IY95 271 aa5.94□□□□□ -1.46
VPS13A-209ENST00000467124 C12orf50Q8NA57 414 aaPredicted RBP5.94□□□□□ -1.46
VPS13A-209ENST00000467124 C2CD4AQ8NCU7 369 aaPredicted RBP5.94□□□□□ -1.46
VPS13A-209ENST00000467124 KLHL6Q8WZ60 621 aa5.94□□□□□ -1.46
VPS13A-209ENST00000467124 APPBP2Q92624 585 aa5.94□□□□□ -1.46
VPS13A-209ENST00000467124 SSU72Q9NP77 194 aaKnown RBP5.94□□□□□ -1.46
VPS13A-209ENST00000467124 ZMYM5Q9UJ78 669 aa5.94□□□□□ -1.46
VPS13A-209ENST00000467124 PTCH2Q9Y6C5 1203 aa5.94□□□□□ -1.46
VPS13A-209ENST00000467124 CNTNAP5Q8WYK1 1306 aa5.94□□□□□ -1.46
VPS13A-209ENST00000467124 SART1O43290 800 aaKnown RBP5.93□□□□□ -1.46
VPS13A-209ENST00000467124 GAS2O43903 313 aaKnown RBP5.93□□□□□ -1.46
VPS13A-209ENST00000467124 FAM153BP0C7A2 387 aa5.93□□□□□ -1.46
VPS13A-209ENST00000467124 ADGRE1Q14246 886 aa5.93□□□□□ -1.46
VPS13A-209ENST00000467124 PRAMEF13Q5VWM6 474 aa5.93□□□□□ -1.46
VPS13A-209ENST00000467124 CDC37L1Q7L3B6 337 aa5.93□□□□□ -1.46
VPS13A-209ENST00000467124 PPFIBP1Q86W92 1011 aa5.93□□□□□ -1.46
VPS13A-209ENST00000467124 MCATQ8IVS2 390 aaKnown RBP5.93□□□□□ -1.46
VPS13A-209ENST00000467124 ANKRD13AQ8IZ07 590 aa5.93□□□□□ -1.46
VPS13A-209ENST00000467124 PPP1R14AQ96A00 147 aa5.93□□□□□ -1.46
VPS13A-209ENST00000467124 SLC6A18Q96N87 628 aa5.93□□□□□ -1.46
VPS13A-209ENST00000467124 ACTL7BQ9Y614 415 aa5.93□□□□□ -1.46
VPS13A-209ENST00000467124 C9IYK1 514 aa5.92□□□□□ -1.46
VPS13A-209ENST00000467124 SUSD5O60279 629 aa5.92□□□□□ -1.46
VPS13A-209ENST00000467124 RAB6AP20340 208 aa5.92□□□□□ -1.46
VPS13A-209ENST00000467124 COL8A1P27658 744 aa5.92□□□□□ -1.46
VPS13A-209ENST00000467124 GBP1P32455 592 aa5.92□□□□□ -1.46
VPS13A-209ENST00000467124 ASPAP45381 313 aa5.92□□□□□ -1.46
VPS13A-209ENST00000467124 SLC7A5Q01650 507 aa5.92□□□□□ -1.46
VPS13A-209ENST00000467124 MBTPS1Q14703 1052 aa5.92□□□□□ -1.46
VPS13A-209ENST00000467124 GRIK4Q16099 956 aa5.92□□□□□ -1.46
VPS13A-209ENST00000467124 PTPROQ16827 1216 aa5.92□□□□□ -1.46
VPS13A-209ENST00000467124 SLC10A6Q3KNW5 377 aa5.92□□□□□ -1.46
VPS13A-209ENST00000467124 TXNRD3Q86VQ6 643 aa5.92□□□□□ -1.46
VPS13A-209ENST00000467124 HOMER1Q86YM7 354 aa5.92□□□□□ -1.46
VPS13A-209ENST00000467124 SMYD4Q8IYR2 804 aaPredicted RBP5.92□□□□□ -1.46
VPS13A-209ENST00000467124 ISL2Q96A47 359 aa5.92□□□□□ -1.46
VPS13A-209ENST00000467124 FAM46AQ96IP4 442 aaKnown RBP5.92□□□□□ -1.46
VPS13A-209ENST00000467124 ACSS3Q9H6R3 686 aa5.92□□□□□ -1.46
VPS13A-209ENST00000467124 PHAXQ9H814 394 aaKnown RBP5.92□□□□□ -1.46
VPS13A-209ENST00000467124 IFT57Q9NWB7 429 aa5.92□□□□□ -1.46
VPS13A-209ENST00000467124 PPP1R12AO14974 1030 aaPredicted RBP5.91□□□□□ -1.46
VPS13A-209ENST00000467124 LRIG2O94898 1065 aa5.91□□□□□ -1.46
VPS13A-209ENST00000467124 UBOX5O94941 541 aa5.91□□□□□ -1.46
VPS13A-209ENST00000467124 ASMTLO95671 621 aa5.91□□□□□ -1.46
VPS13A-209ENST00000467124 CST3P01034 146 aaPredicted RBP5.91□□□□□ -1.46
VPS13A-209ENST00000467124 GLB1P16278 677 aa5.91□□□□□ -1.46
VPS13A-209ENST00000467124 PREPP48147 710 aa5.91□□□□□ -1.46
VPS13A-209ENST00000467124 SLBPQ14493 270 aaKnown RBP eCLIP5.91□□□□□ -1.46
VPS13A-209ENST00000467124 SV2CQ496J9 727 aa5.91□□□□□ -1.46
VPS13A-209ENST00000467124 C2orf27AQ580R0 203 aa5.91□□□□□ -1.46
VPS13A-209ENST00000467124 RNF187Q5TA31 235 aaPredicted RBP5.91□□□□□ -1.46
VPS13A-209ENST00000467124 EEPD1Q7L9B9 569 aa5.91□□□□□ -1.46
VPS13A-209ENST00000467124 DZIP1LQ8IYY4 767 aaKnown RBP5.91□□□□□ -1.46
VPS13A-209ENST00000467124 MFSD2AQ8NA29 543 aa5.91□□□□□ -1.46
VPS13A-209ENST00000467124 CYB5D2Q8WUJ1 264 aa5.91□□□□□ -1.46
VPS13A-209ENST00000467124 WFDC12Q8WWY7 111 aa5.91□□□□□ -1.46
VPS13A-209ENST00000467124 EZH1Q92800 747 aaPredicted RBP5.91□□□□□ -1.46
VPS13A-209ENST00000467124 FGD4Q96M96 766 aa5.91□□□□□ -1.46
VPS13A-209ENST00000467124 FAM105AQ9NUU6 356 aa5.91□□□□□ -1.46
VPS13A-209ENST00000467124 PCOLCE2Q9UKZ9 415 aa5.91□□□□□ -1.46
VPS13A-209ENST00000467124 NOS3P29474 1203 aa5.9□□□□□ -1.46
VPS13A-209ENST00000467124 L1CAMP32004 1257 aa5.9□□□□□ -1.46
VPS13A-209ENST00000467124 USP11P51784 963 aa5.9□□□□□ -1.46
VPS13A-209ENST00000467124 GYS2P54840 703 aa5.9□□□□□ -1.46
VPS13A-209ENST00000467124 MAP7Q14244 749 aa5.9□□□□□ -1.46
VPS13A-209ENST00000467124 NCAPHQ15003 741 aa5.9□□□□□ -1.46
VPS13A-209ENST00000467124 BBS9Q3SYG4 887 aa5.9□□□□□ -1.46
VPS13A-209ENST00000467124 PLEKHG4Q58EX7 1191 aa5.9□□□□□ -1.46
VPS13A-209ENST00000467124 FOXB2Q5VYV0 432 aa5.9□□□□□ -1.46
VPS13A-209ENST00000467124 DCAF15Q66K64 600 aa5.9□□□□□ -1.46
VPS13A-209ENST00000467124 THAP3Q8WTV1 239 aaPredicted RBP5.9□□□□□ -1.46
VPS13A-209ENST00000467124 MYRFLQ96LU7 910 aa5.9□□□□□ -1.46
VPS13A-209ENST00000467124 SPATA9Q9BWV2 254 aa5.9□□□□□ -1.46
VPS13A-209ENST00000467124 CWC22Q9HCG8 908 aaKnown RBP5.9□□□□□ -1.46
VPS13A-209ENST00000467124 TMEM260Q9NX78 707 aa5.9□□□□□ -1.46
VPS13A-209ENST00000467124 ZNF214Q9UL59 606 aaPredicted RBP5.9□□□□□ -1.46
VPS13A-209ENST00000467124 CD2APQ9Y5K6 639 aa5.9□□□□□ -1.46
VPS13A-209ENST00000467124 hCG_2014768A0A024R1R8 64 aa5.89□□□□□ -1.47
VPS13A-209ENST00000467124 EPHX1P07099 455 aa5.89□□□□□ -1.47
VPS13A-209ENST00000467124 CBX2Q14781 532 aaPredicted RBP5.89□□□□□ -1.47
VPS13A-209ENST00000467124 AXDND1Q5T1B0 1012 aaPredicted RBP5.89□□□□□ -1.47
VPS13A-209ENST00000467124 YOD1Q5VVQ6 348 aaPredicted RBP5.89□□□□□ -1.47
VPS13A-209ENST00000467124 ARMCX6Q7L4S7 300 aa5.89□□□□□ -1.47
VPS13A-209ENST00000467124 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.89□□□□□ -1.47
VPS13A-209ENST00000467124 ST13P5Q8NFI4 369 aaPredicted RBP5.89□□□□□ -1.47
VPS13A-209ENST00000467124 SMARCC1Q92922 1105 aaPredicted RBP5.89□□□□□ -1.47
VPS13A-209ENST00000467124 UTP4Q969X6 686 aaKnown RBP5.89□□□□□ -1.47
VPS13A-209ENST00000467124 ZNF669Q96BR6 464 aaPredicted RBP5.89□□□□□ -1.47
VPS13A-209ENST00000467124 DHRS1Q96LJ7 313 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms