RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 CCDC69A6NI79 296 aa12.61□□□□□ -0.39
NUP188-204ENST00000467044 UBE2Q2LH0YL09 131 aa12.61□□□□□ -0.39
NUP188-204ENST00000467044 TOMM70O94826 608 aa12.61□□□□□ -0.39
NUP188-204ENST00000467044 ANP32AP39687 249 aaKnown RBP12.61□□□□□ -0.39
NUP188-204ENST00000467044 APOBRQ0VD83 1088 aa12.61□□□□□ -0.39
NUP188-204ENST00000467044 TOB2Q14106 344 aaPredicted RBP12.61□□□□□ -0.39
NUP188-204ENST00000467044 SEC23AQ15436 765 aa12.61□□□□□ -0.39
NUP188-204ENST00000467044 SCYL3Q8IZE3 742 aa12.61□□□□□ -0.39
NUP188-204ENST00000467044 TMTC2Q8N394 836 aa12.61□□□□□ -0.39
NUP188-204ENST00000467044 C2orf69Q8N8R5 385 aa12.61□□□□□ -0.39
NUP188-204ENST00000467044 IL27Q8NEV9 243 aa12.61□□□□□ -0.39
NUP188-204ENST00000467044 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.61□□□□□ -0.39
NUP188-204ENST00000467044 MTA3Q9BTC8 594 aa12.61□□□□□ -0.39
NUP188-204ENST00000467044 ALDH8A1Q9H2A2 487 aaPredicted RBP12.61□□□□□ -0.39
NUP188-204ENST00000467044 KANSL2Q9H9L4 492 aa12.61□□□□□ -0.39
NUP188-204ENST00000467044 LY9Q9HBG7 655 aa12.61□□□□□ -0.39
NUP188-204ENST00000467044 SENP2Q9HC62 589 aa12.61□□□□□ -0.39
NUP188-204ENST00000467044 PICK1Q9NRD5 415 aa12.61□□□□□ -0.39
NUP188-204ENST00000467044 MTMR4Q9NYA4 1195 aa12.61□□□□□ -0.39
NUP188-204ENST00000467044 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.61□□□□□ -0.39
NUP188-204ENST00000467044 CLIP2Q9UDT6 1046 aa12.61□□□□□ -0.39
NUP188-204ENST00000467044 CSADQ9Y600 493 aa12.61□□□□□ -0.39
NUP188-204ENST00000467044 PLIN4Q96Q06 1357 aa12.6□□□□□ -0.39
NUP188-204ENST00000467044 IGKV6D-41A0A0C4DH26 115 aa12.6□□□□□ -0.39
NUP188-204ENST00000467044 CD2BP2O95400 341 aaKnown RBP12.6□□□□□ -0.39
NUP188-204ENST00000467044 TTLL1O95922 423 aa12.6□□□□□ -0.39
NUP188-204ENST00000467044 EEF2P13639 858 aaKnown RBP12.6□□□□□ -0.39
NUP188-204ENST00000467044 GUCY1A2P33402 732 aa12.6□□□□□ -0.39
NUP188-204ENST00000467044 LIFRP42702 1097 aa12.6□□□□□ -0.39
NUP188-204ENST00000467044 ICA1Q05084 483 aa12.6□□□□□ -0.39
NUP188-204ENST00000467044 PPP4R3BQ5MIZ7 849 aa12.6□□□□□ -0.39
NUP188-204ENST00000467044 SYNE3Q6ZMZ3 975 aa12.6□□□□□ -0.39
NUP188-204ENST00000467044 CCDC84Q86UT8 332 aaPredicted RBP12.6□□□□□ -0.39
NUP188-204ENST00000467044 DGKHQ86XP1 1220 aa12.6□□□□□ -0.39
NUP188-204ENST00000467044 ANKRD13AQ8IZ07 590 aa12.6□□□□□ -0.39
NUP188-204ENST00000467044 RBM46Q8TBY0 533 aaKnown RBP12.6□□□□□ -0.39
NUP188-204ENST00000467044 KAT14Q9H8E8 782 aa12.6□□□□□ -0.39
NUP188-204ENST00000467044 GBA2Q9HCG7 927 aaPredicted RBP12.6□□□□□ -0.39
NUP188-204ENST00000467044 GINM1Q9NU53 330 aa12.6□□□□□ -0.39
NUP188-204ENST00000467044 MTMR7Q9Y216 660 aa12.6□□□□□ -0.39
NUP188-204ENST00000467044 DOCK1Q14185 1865 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 TRPM7Q96QT4 1865 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 MYH4Q9Y623 1939 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 KLF18A0A0U1RQI7 1052 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 USP17L5A8MUK1 530 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 RAD21O60216 631 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 TOP1P11387 765 aaKnown RBP12.59□□□□□ -0.39
NUP188-204ENST00000467044 MCM2P49736 904 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 VGLL4Q14135 290 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 MAP3K11Q16584 847 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 RCSD1Q6JBY9 416 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.59□□□□□ -0.39
NUP188-204ENST00000467044 RAB11FIP4Q86YS3 637 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 HSCBQ8IWL3 235 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 FBXL16Q8N461 479 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 CHMP4CQ96CF2 233 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 TMEM47Q9BQJ4 181 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 AGXT2Q9BYV1 514 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 ELP3Q9H9T3 547 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 ARHGEF10LQ9HCE6 1279 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 NYAP2Q9P242 653 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 LIMCH1Q9UPQ0 1083 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 SLC12A7Q9Y666 1083 aa12.59□□□□□ -0.39
NUP188-204ENST00000467044 GREB1LQ9C091 1923 aaPredicted RBP12.58□□□□□ -0.39
NUP188-204ENST00000467044 PTPRAP18433 802 aa12.58□□□□□ -0.4
NUP188-204ENST00000467044 FKBP1BP68106 108 aa12.58□□□□□ -0.4
NUP188-204ENST00000467044 STK3Q13188 491 aa12.58□□□□□ -0.4
NUP188-204ENST00000467044 NOL9Q5SY16 702 aaKnown RBP12.58□□□□□ -0.4
NUP188-204ENST00000467044 CST9Q5W186 159 aa12.58□□□□□ -0.4
NUP188-204ENST00000467044 CATIPQ7Z7H3 387 aa12.58□□□□□ -0.4
NUP188-204ENST00000467044 SGMS1Q86VZ5 419 aa12.58□□□□□ -0.4
NUP188-204ENST00000467044 LRRC47Q8N1G4 583 aaKnown RBP12.58□□□□□ -0.4
NUP188-204ENST00000467044 PNMA1Q8ND90 353 aa12.58□□□□□ -0.4
NUP188-204ENST00000467044 ACER1Q8TDN7 264 aa12.58□□□□□ -0.4
NUP188-204ENST00000467044 NUP133Q8WUM0 1156 aa12.58□□□□□ -0.4
NUP188-204ENST00000467044 ANKS1AQ92625 1134 aa12.58□□□□□ -0.4
NUP188-204ENST00000467044 SNX21Q969T3 373 aa12.58□□□□□ -0.4
NUP188-204ENST00000467044 CLMNQ96JQ2 1002 aa12.58□□□□□ -0.4
NUP188-204ENST00000467044 AS3MTQ9HBK9 375 aa12.58□□□□□ -0.4
NUP188-204ENST00000467044 BRPF3Q9ULD4 1205 aa12.58□□□□□ -0.4
NUP188-204ENST00000467044 TPCN1Q9ULQ1 816 aa12.58□□□□□ -0.4
NUP188-204ENST00000467044 ZHX2Q9Y6X8 837 aa12.58□□□□□ -0.4
NUP188-204ENST00000467044 PAPPA2Q9BXP8 1791 aa12.57□□□□□ -0.4
NUP188-204ENST00000467044 GOLGA8BA8MQT2 603 aa12.57□□□□□ -0.4
NUP188-204ENST00000467044 ZBTB43O43298 467 aa12.57□□□□□ -0.4
NUP188-204ENST00000467044 RXRAP19793 462 aa12.57□□□□□ -0.4
NUP188-204ENST00000467044 ECE1P42892 770 aa12.57□□□□□ -0.4
NUP188-204ENST00000467044 BECN1Q14457 450 aa12.57□□□□□ -0.4
NUP188-204ENST00000467044 ZYXQ15942 572 aaKnown RBP12.57□□□□□ -0.4
NUP188-204ENST00000467044 APOA5Q6Q788 366 aa12.57□□□□□ -0.4
NUP188-204ENST00000467044 MICU3Q86XE3 530 aa12.57□□□□□ -0.4
NUP188-204ENST00000467044 SIAH1Q8IUQ4 282 aa12.57□□□□□ -0.4
NUP188-204ENST00000467044 CCDC144CPQ8IYA2 1237 aa12.57□□□□□ -0.4
NUP188-204ENST00000467044 ZNF654Q8IZM8 581 aa12.57□□□□□ -0.4
NUP188-204ENST00000467044 SLC10A4Q96EP9 437 aa12.57□□□□□ -0.4
NUP188-204ENST00000467044 ZSCAN31Q96LW9 406 aaPredicted RBP12.57□□□□□ -0.4
NUP188-204ENST00000467044 FEZ1Q99689 392 aa12.57□□□□□ -0.4
NUP188-204ENST00000467044 MYL10Q9BUA6 226 aa12.57□□□□□ -0.4
NUP188-204ENST00000467044 SNCAIPQ9Y6H5 919 aa12.57□□□□□ -0.4
NUP188-204ENST00000467044 OTOFQ9HC10 1997 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms