RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 IFFO2Q5TF58 517 aa11.12□□□□□ -0.63
SRPRB-202ENST00000466636 SH3BP5LQ7L8J4 393 aa11.12□□□□□ -0.63
SRPRB-202ENST00000466636 NBPF11Q86T75 865 aa11.12□□□□□ -0.63
SRPRB-202ENST00000466636 TMEM87AQ8NBN3 555 aa11.12□□□□□ -0.63
SRPRB-202ENST00000466636 NUP133Q8WUM0 1156 aa11.12□□□□□ -0.63
SRPRB-202ENST00000466636 TDRD3Q9H7E2 651 aaKnown RBP11.12□□□□□ -0.63
SRPRB-202ENST00000466636 SWAP70Q9UH65 585 aa11.12□□□□□ -0.63
SRPRB-202ENST00000466636 PLIN4Q96Q06 1357 aa11.12□□□□□ -0.63
SRPRB-202ENST00000466636 COL2A1P02458 1487 aaPredicted RBP11.12□□□□□ -0.63
SRPRB-202ENST00000466636 IGKV6D-41A0A0C4DH26 115 aa11.11□□□□□ -0.63
SRPRB-202ENST00000466636 HLA-DOAP06340 250 aa11.11□□□□□ -0.63
SRPRB-202ENST00000466636 SHMT1P34896 483 aa11.11□□□□□ -0.63
SRPRB-202ENST00000466636 FOSBP53539 338 aa11.11□□□□□ -0.63
SRPRB-202ENST00000466636 DNM1Q05193 864 aaKnown RBP11.11□□□□□ -0.63
SRPRB-202ENST00000466636 FUT2Q10981 343 aa11.11□□□□□ -0.63
SRPRB-202ENST00000466636 FOXD4L6Q3SYB3 417 aaPredicted RBP11.11□□□□□ -0.63
SRPRB-202ENST00000466636 CIAPIN1Q6FI81 312 aa11.11□□□□□ -0.63
SRPRB-202ENST00000466636 FOXD4L3Q6VB84 417 aaPredicted RBP11.11□□□□□ -0.63
SRPRB-202ENST00000466636 FERMT3Q86UX7 667 aa11.11□□□□□ -0.63
SRPRB-202ENST00000466636 CRACR2BQ8N4Y2 399 aaPredicted RBP11.11□□□□□ -0.63
SRPRB-202ENST00000466636 MTMR14Q8NCE2 650 aa11.11□□□□□ -0.63
SRPRB-202ENST00000466636 JDP2Q8WYK2 163 aa11.11□□□□□ -0.63
SRPRB-202ENST00000466636 PHKBQ93100 1093 aa11.11□□□□□ -0.63
SRPRB-202ENST00000466636 ZBED3Q96IU2 234 aaPredicted RBP11.11□□□□□ -0.63
SRPRB-202ENST00000466636 C8orf76Q96K31 380 aa11.11□□□□□ -0.63
SRPRB-202ENST00000466636 AIFM3Q96NN9 605 aa11.11□□□□□ -0.63
SRPRB-202ENST00000466636 ALG1Q9BT22 464 aa11.11□□□□□ -0.63
SRPRB-202ENST00000466636 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.11□□□□□ -0.63
SRPRB-202ENST00000466636 DHX36Q9H2U1 1008 aaKnown RBP11.11□□□□□ -0.63
SRPRB-202ENST00000466636 RBM28Q9NW13 759 aaKnown RBP11.11□□□□□ -0.63
SRPRB-202ENST00000466636 SERPINB13Q9UIV8 391 aa11.11□□□□□ -0.63
SRPRB-202ENST00000466636 HDAC9Q9UKV0 1011 aa11.11□□□□□ -0.63
SRPRB-202ENST00000466636 CNPY2Q9Y2B0 182 aa11.11□□□□□ -0.63
SRPRB-202ENST00000466636 BRCA1P38398 1863 aaKnown RBP11.1□□□□□ -0.63
SRPRB-202ENST00000466636 BAZ2AQ9UIF9 1905 aaKnown RBP11.1□□□□□ -0.63
SRPRB-202ENST00000466636 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.1□□□□□ -0.63
SRPRB-202ENST00000466636 DDTLA6NHG4 134 aaPredicted RBP11.1□□□□□ -0.63
SRPRB-202ENST00000466636 PRPF40AO75400 957 aaKnown RBP11.1□□□□□ -0.63
SRPRB-202ENST00000466636 SSRP1Q08945 709 aaKnown RBP11.1□□□□□ -0.63
SRPRB-202ENST00000466636 DLGAP5Q15398 846 aa11.1□□□□□ -0.63
SRPRB-202ENST00000466636 SKOR2Q2VWA4 1001 aaPredicted RBP11.1□□□□□ -0.63
SRPRB-202ENST00000466636 OTUD7BQ6GQQ9 843 aa11.1□□□□□ -0.63
SRPRB-202ENST00000466636 FAM173BQ6P4H8 233 aa11.1□□□□□ -0.63
SRPRB-202ENST00000466636 TMTC3Q6ZXV5 915 aa11.1□□□□□ -0.63
SRPRB-202ENST00000466636 FBXO18Q8NFZ0 1043 aa11.1□□□□□ -0.63
SRPRB-202ENST00000466636 ZFP91Q96JP5 570 aaPredicted RBP11.1□□□□□ -0.63
SRPRB-202ENST00000466636 MAP3K14Q99558 947 aa11.1□□□□□ -0.63
SRPRB-202ENST00000466636 SLC26A6Q9BXS9 759 aa11.1□□□□□ -0.63
SRPRB-202ENST00000466636 ZSCAN16Q9H4T2 348 aaPredicted RBP11.1□□□□□ -0.63
SRPRB-202ENST00000466636 DNAJC18Q9H819 358 aa11.1□□□□□ -0.63
SRPRB-202ENST00000466636 KAT14Q9H8E8 782 aa11.1□□□□□ -0.63
SRPRB-202ENST00000466636 ATRNL1Q5VV63 1379 aa11.1□□□□□ -0.63
SRPRB-202ENST00000466636 UBE2Q2LH0YL09 131 aa11.09□□□□□ -0.63
SRPRB-202ENST00000466636 FZD9O00144 591 aa11.09□□□□□ -0.63
SRPRB-202ENST00000466636 PLEKHA8P1O95397 391 aa11.09□□□□□ -0.63
SRPRB-202ENST00000466636 AKR1B1P15121 316 aa11.09□□□□□ -0.63
SRPRB-202ENST00000466636 ZNF280AP59817 542 aaPredicted RBP11.09□□□□□ -0.63
SRPRB-202ENST00000466636 GUCY1B3Q02153 619 aa11.09□□□□□ -0.63
SRPRB-202ENST00000466636 TCP10Q12799 353 aa11.09□□□□□ -0.63
SRPRB-202ENST00000466636 GRM4Q14833 912 aa11.09□□□□□ -0.63
SRPRB-202ENST00000466636 TNIP1Q15025 636 aa11.09□□□□□ -0.63
SRPRB-202ENST00000466636 KLHL40Q2TBA0 621 aa11.09□□□□□ -0.63
SRPRB-202ENST00000466636 METTL16Q86W50 562 aaKnown RBP11.09□□□□□ -0.63
SRPRB-202ENST00000466636 CMTR1Q8N1G2 835 aaKnown RBP11.09□□□□□ -0.63
SRPRB-202ENST00000466636 OGFOD1Q8N543 542 aa11.09□□□□□ -0.63
SRPRB-202ENST00000466636 PNMA1Q8ND90 353 aa11.09□□□□□ -0.63
SRPRB-202ENST00000466636 TMEM47Q9BQJ4 181 aa11.09□□□□□ -0.63
SRPRB-202ENST00000466636 RNF26Q9BY78 433 aaPredicted RBP11.09□□□□□ -0.63
SRPRB-202ENST00000466636 GDPD2Q9HCC8 539 aa11.09□□□□□ -0.63
SRPRB-202ENST00000466636 GJB4Q9NTQ9 266 aa11.09□□□□□ -0.63
SRPRB-202ENST00000466636 RYDENQ9NUL5 291 aaKnown RBP11.09□□□□□ -0.63
SRPRB-202ENST00000466636 PI4KBQ9UBF8 816 aa11.09□□□□□ -0.63
SRPRB-202ENST00000466636 ZNF70Q9UC06 446 aaPredicted RBP11.09□□□□□ -0.63
SRPRB-202ENST00000466636 PSME4Q14997 1843 aa11.08□□□□□ -0.64
SRPRB-202ENST00000466636 DEXIO95424 95 aa11.08□□□□□ -0.64
SRPRB-202ENST00000466636 SLURP2P0DP57 97 aa11.08□□□□□ -0.64
SRPRB-202ENST00000466636 PYGBP11216 843 aa11.08□□□□□ -0.64
SRPRB-202ENST00000466636 RPS12P25398 132 aaKnown RBP11.08□□□□□ -0.64
SRPRB-202ENST00000466636 GUCY1A2P33402 732 aa11.08□□□□□ -0.64
SRPRB-202ENST00000466636 MMP14P50281 582 aa11.08□□□□□ -0.64
SRPRB-202ENST00000466636 KRT85P78386 507 aa11.08□□□□□ -0.64
SRPRB-202ENST00000466636 FKBP1CQ5VVH2 108 aa11.08□□□□□ -0.64
SRPRB-202ENST00000466636 KRT40Q6A162 431 aa11.08□□□□□ -0.64
SRPRB-202ENST00000466636 USP48Q86UV5 1035 aa11.08□□□□□ -0.64
SRPRB-202ENST00000466636 FOXP4Q8IVH2 680 aaPredicted RBP11.08□□□□□ -0.64
SRPRB-202ENST00000466636 TRIM22Q8IYM9 498 aa11.08□□□□□ -0.64
SRPRB-202ENST00000466636 CTCFLQ8NI51 663 aaPredicted RBP11.08□□□□□ -0.64
SRPRB-202ENST00000466636 WASF1Q92558 559 aa11.08□□□□□ -0.64
SRPRB-202ENST00000466636 CEP95Q96GE4 821 aa11.08□□□□□ -0.64
SRPRB-202ENST00000466636 FHDC1Q9C0D6 1143 aaPredicted RBP11.08□□□□□ -0.64
SRPRB-202ENST00000466636 PLSCR2Q9NRY7 297 aa11.08□□□□□ -0.64
SRPRB-202ENST00000466636 TMOD2Q9NZR1 351 aa11.08□□□□□ -0.64
SRPRB-202ENST00000466636 STK24Q9Y6E0 443 aa11.08□□□□□ -0.64
SRPRB-202ENST00000466636 FER1L6Q2WGJ9 1857 aa11.08□□□□□ -0.64
SRPRB-202ENST00000466636 CNTNAP5Q8WYK1 1306 aa11.08□□□□□ -0.64
SRPRB-202ENST00000466636 FOCADQ5VW36 1801 aa11.07□□□□□ -0.64
SRPRB-202ENST00000466636 CNTNAP1P78357 1384 aa11.07□□□□□ -0.64
SRPRB-202ENST00000466636 CDK5RAP2Q96SN8 1893 aa11.07□□□□□ -0.64
SRPRB-202ENST00000466636 SHTN1A0MZ66 631 aa11.07□□□□□ -0.64
SRPRB-202ENST00000466636 CLRN2A0PK11 232 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms