RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 ZNF287Q9HBT7 754 aa7.84□□□□□ -1.15
CDHR3-204ENST00000466351 SEC31BQ9NQW1 1179 aa7.84□□□□□ -1.15
CDHR3-204ENST00000466351 NRBP1Q9UHY1 535 aa7.84□□□□□ -1.15
CDHR3-204ENST00000466351 ITIH6Q6UXX5 1313 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 CNTNAP5Q8WYK1 1306 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 IRS2Q9Y4H2 1338 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 hCG_1984214I3L0E3 225 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 ZSCAN12O43309 604 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 ACTN4O43707 911 aaKnown RBP7.83□□□□□ -1.16
CDHR3-204ENST00000466351 STX10O60499 249 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 ADAMTS2O95450 1211 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 TPM1P09493 284 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 SLFN14P0C7P3 912 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 SMARCA1P28370 1054 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 PPP1R2P41236 205 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 TOB1P50616 345 aaPredicted RBP7.83□□□□□ -1.16
CDHR3-204ENST00000466351 PLCD1P51178 756 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 UBASH3AP57075 661 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 GSTO1P78417 241 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 ATP2C1P98194 919 aaPredicted RBP7.83□□□□□ -1.16
CDHR3-204ENST00000466351 CTDSPL2Q05D32 466 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 PDE4BQ07343 736 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 SPAG1Q07617 926 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 TUBB2AQ13885 445 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 TRIM14Q14142 442 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 OTUD7BQ6GQQ9 843 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 SH3RF1Q7Z6J0 888 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 DGKHQ86XP1 1220 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 ZNF713Q8N859 430 aaPredicted RBP7.83□□□□□ -1.16
CDHR3-204ENST00000466351 ENAHQ8N8S7 591 aaPredicted RBP7.83□□□□□ -1.16
CDHR3-204ENST00000466351 DAGLBQ8NCG7 672 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 CTCFLQ8NI51 663 aaPredicted RBP7.83□□□□□ -1.16
CDHR3-204ENST00000466351 WDR66Q8TBY9 1149 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 SMARCE1Q969G3 411 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 CCDC51Q96ER9 411 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 LZTS2Q9BRK4 669 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 TUBB2BQ9BVA1 445 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 TCP11L1Q9NUJ3 509 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 IFNKQ9P0W0 207 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 MINPP1Q9UNW1 487 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 LEMD3Q9Y2U8 911 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 PCDHA5Q9Y5H7 936 aa7.83□□□□□ -1.16
CDHR3-204ENST00000466351 GREB1LQ9C091 1923 aaPredicted RBP7.82□□□□□ -1.16
CDHR3-204ENST00000466351 BTBD18B2RXH4 712 aa7.82□□□□□ -1.16
CDHR3-204ENST00000466351 FECHP22830 423 aa7.82□□□□□ -1.16
CDHR3-204ENST00000466351 MARCKSP29966 332 aaPredicted RBP7.82□□□□□ -1.16
CDHR3-204ENST00000466351 FOSBP53539 338 aa7.82□□□□□ -1.16
CDHR3-204ENST00000466351 RPS8P62241 208 aaKnown RBP7.82□□□□□ -1.16
CDHR3-204ENST00000466351 ETF1P62495 437 aaKnown RBP7.82□□□□□ -1.16
CDHR3-204ENST00000466351 NCBP1Q09161 790 aaKnown RBP7.82□□□□□ -1.16
CDHR3-204ENST00000466351 TBX2Q13207 712 aaPredicted RBP7.82□□□□□ -1.16
CDHR3-204ENST00000466351 PKN1Q16512 942 aa7.82□□□□□ -1.16
CDHR3-204ENST00000466351 E4F1Q66K89 784 aaPredicted RBP7.82□□□□□ -1.16
CDHR3-204ENST00000466351 SPECC1LQ69YQ0 1117 aa7.82□□□□□ -1.16
CDHR3-204ENST00000466351 FILIP1Q7Z7B0 1213 aa7.82□□□□□ -1.16
CDHR3-204ENST00000466351 AMOTL1Q8IY63 956 aa7.82□□□□□ -1.16
CDHR3-204ENST00000466351 ZNF710Q8N1W2 664 aa7.82□□□□□ -1.16
CDHR3-204ENST00000466351 CCDC148Q8NFR7 591 aa7.82□□□□□ -1.16
CDHR3-204ENST00000466351 HELBQ8NG08 1087 aaPredicted RBP7.82□□□□□ -1.16
CDHR3-204ENST00000466351 NSUN4Q96CB9 384 aaKnown RBP7.82□□□□□ -1.16
CDHR3-204ENST00000466351 FAM84BQ96KN1 310 aaPredicted RBP7.82□□□□□ -1.16
CDHR3-204ENST00000466351 AIFM3Q96NN9 605 aa7.82□□□□□ -1.16
CDHR3-204ENST00000466351 NLRP3Q96P20 1036 aa7.82□□□□□ -1.16
CDHR3-204ENST00000466351 PANX2Q96RD6 677 aa7.82□□□□□ -1.16
CDHR3-204ENST00000466351 CUEDC2Q9H467 287 aa7.82□□□□□ -1.16
CDHR3-204ENST00000466351 RMND1Q9NWS8 449 aa7.82□□□□□ -1.16
CDHR3-204ENST00000466351 RAI14Q9P0K7 980 aa7.82□□□□□ -1.16
CDHR3-204ENST00000466351 TACC3Q9Y6A5 838 aa7.82□□□□□ -1.16
CDHR3-204ENST00000466351 PLIN4Q96Q06 1357 aa7.82□□□□□ -1.16
CDHR3-204ENST00000466351 NRXN2Q9P2S2 1712 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 A0A1B0GTH6 734 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 DTNBO60941 627 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 SLU7O95391 586 aaKnown RBP7.81□□□□□ -1.16
CDHR3-204ENST00000466351 SERPINC1P01008 464 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 LDHCP07864 332 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 TOP1P11387 765 aaKnown RBP7.81□□□□□ -1.16
CDHR3-204ENST00000466351 SCG2P13521 617 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 PRKCSHP14314 528 aaPredicted RBP7.81□□□□□ -1.16
CDHR3-204ENST00000466351 PLCG2P16885 1265 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 HIBADHP31937 336 aaKnown RBP7.81□□□□□ -1.16
CDHR3-204ENST00000466351 LONP1P36776 959 aaKnown RBP7.81□□□□□ -1.16
CDHR3-204ENST00000466351 PRPHP41219 470 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 PPP4CP60510 307 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 PFKFB3Q16875 520 aaPredicted RBP7.81□□□□□ -1.16
CDHR3-204ENST00000466351 LONRF3Q496Y0 759 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 TPRNQ4KMQ1 711 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 SPATA1Q5VX52 437 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 ARMCX5Q6P1M9 558 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 CTR9Q6PD62 1173 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 TPTE2Q6XPS3 522 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 TMC6Q7Z403 805 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 TMC4Q7Z404 712 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 C17orf53Q8N3J3 647 aaPredicted RBP7.81□□□□□ -1.16
CDHR3-204ENST00000466351 ZNF397Q8NF99 534 aaPredicted RBP7.81□□□□□ -1.16
CDHR3-204ENST00000466351 IQCDQ96DY2 449 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 PPP1R13BQ96KQ4 1090 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 SENP2Q9HC62 589 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 DCP1AQ9NPI6 582 aaPredicted RBP7.81□□□□□ -1.16
CDHR3-204ENST00000466351 CREBZFQ9NS37 354 aa7.81□□□□□ -1.16
CDHR3-204ENST00000466351 DNAI1Q9UI46 699 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms